RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ZNF324O75467 553 aaPredicted RBP8.98□□□□□ -0.97
LINC00339-213ENST00000642137 IGLV2-8P01709 118 aa8.98□□□□□ -0.97
LINC00339-213ENST00000642137 RNASE4P34096 147 aaKnown RBP8.98□□□□□ -0.97
LINC00339-213ENST00000642137 GNG4P50150 75 aa8.98□□□□□ -0.97
LINC00339-213ENST00000642137 CEBPGP53567 150 aa8.98□□□□□ -0.97
LINC00339-213ENST00000642137 KIR3DS1Q14943 382 aa8.98□□□□□ -0.97
LINC00339-213ENST00000642137 ZNF674Q2M3X9 581 aa8.98□□□□□ -0.97
LINC00339-213ENST00000642137 GFI1BQ5VTD9 330 aa8.98□□□□□ -0.97
LINC00339-213ENST00000642137 Q6AWC8 147 aa8.98□□□□□ -0.97
LINC00339-213ENST00000642137 SBSPONQ8IVN8 264 aa8.98□□□□□ -0.97
LINC00339-213ENST00000642137 LY96Q9Y6Y9 160 aa8.98□□□□□ -0.97
LINC00339-213ENST00000642137 NOTCH1P46531 2555 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 ZNF727A8MUV8 499 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 J3KRW8 73 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 GCGP01275 180 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 INSP01308 110 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 CENPWQ5EE01 88 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 SOHLH1Q5JUK2 328 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 PRR9Q5T870 116 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 C1orf158Q8N1D5 194 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 TMEM256Q8N2U0 113 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 RNF183Q96D59 192 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 SMIM7Q9BQ49 75 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 BIN3Q9NQY0 253 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 TP53TG1Q9Y2A0 90 aa8.97□□□□□ -0.97
LINC00339-213ENST00000642137 TRBV20OR9-2A0A075B6H5 130 aa8.96□□□□□ -0.98
LINC00339-213ENST00000642137 TRAV12-3A0A0B4J271 114 aa8.96□□□□□ -0.98
LINC00339-213ENST00000642137 TRAV21A0A0B4J279 112 aa8.96□□□□□ -0.98
LINC00339-213ENST00000642137 FABP5P3A8MUU1 101 aa8.96□□□□□ -0.98
LINC00339-213ENST00000642137 ZNF80P51504 273 aaPredicted RBP8.96□□□□□ -0.98
LINC00339-213ENST00000642137 BTN1A1Q13410 526 aa8.96□□□□□ -0.98
LINC00339-213ENST00000642137 NDUFA5Q16718 116 aa8.96□□□□□ -0.98
LINC00339-213ENST00000642137 TMEM241Q24JQ0 296 aa8.96□□□□□ -0.98
LINC00339-213ENST00000642137 OCC1Q8TAD7 63 aa8.96□□□□□ -0.98
LINC00339-213ENST00000642137 RCHY1Q96PM5 261 aa8.96□□□□□ -0.98
LINC00339-213ENST00000642137 B9D2Q9BPU9 175 aa8.96□□□□□ -0.98
LINC00339-213ENST00000642137 NIPSNAP3BQ9BS92 247 aa8.96□□□□□ -0.98
LINC00339-213ENST00000642137 GOLT1BQ9Y3E0 138 aa8.96□□□□□ -0.98
LINC00339-213ENST00000642137 NBEAL1Q6ZS30 2694 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 TMEM218A2RU14 115 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 H7BYZ3 331 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 SPRY2O43597 315 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 PFN1P07737 140 aaKnown RBP8.95□□□□□ -0.98
LINC00339-213ENST00000642137 SFTA3P0C7M3 94 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 CRIP1P50238 77 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 ZNF705AQ6ZN79 300 aaPredicted RBP8.95□□□□□ -0.98
LINC00339-213ENST00000642137 NHLRC2Q8NBF2 726 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 ZC2HC1AQ96GY0 325 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 LINC01587Q99440 93 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 NEU1Q99519 415 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 TM2D3Q9BRN9 247 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 LINC00467Q9BRT7 94 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 NAT8Q9UHE5 227 aa8.95□□□□□ -0.98
LINC00339-213ENST00000642137 RBMY1A1P0DJD3 496 aaKnown RBP8.94□□□□□ -0.98
LINC00339-213ENST00000642137 RBMY1CP0DJD4 496 aa8.94□□□□□ -0.98
LINC00339-213ENST00000642137 MGST1P10620 155 aaKnown RBP8.94□□□□□ -0.98
LINC00339-213ENST00000642137 RBMY1FQ15415 496 aaKnown RBP8.94□□□□□ -0.98
LINC00339-213ENST00000642137 DEFB135Q30KP9 77 aa8.94□□□□□ -0.98
LINC00339-213ENST00000642137 FAM162BQ5T6X4 162 aa8.94□□□□□ -0.98
LINC00339-213ENST00000642137 SPATA25Q9BR10 227 aa8.94□□□□□ -0.98
LINC00339-213ENST00000642137 OVOL2Q9BRP0 275 aa8.94□□□□□ -0.98
LINC00339-213ENST00000642137 PYGO2Q9BRQ0 406 aa8.94□□□□□ -0.98
LINC00339-213ENST00000642137 TMEM208Q9BTX3 173 aa8.94□□□□□ -0.98
LINC00339-213ENST00000642137 SDF2L1Q9HCN8 221 aa8.94□□□□□ -0.98
LINC00339-213ENST00000642137 PGPEP1LA6NFU8 196 aa8.93□□□□□ -0.98
LINC00339-213ENST00000642137 SMIM9A6NGZ8 99 aa8.93□□□□□ -0.98
LINC00339-213ENST00000642137 NHLRC4P0CG21 123 aaPredicted RBP8.93□□□□□ -0.98
LINC00339-213ENST00000642137 Q6ZQT7 251 aa8.93□□□□□ -0.98
LINC00339-213ENST00000642137 ZMAT4Q9H898 229 aa8.93□□□□□ -0.98
LINC00339-213ENST00000642137 IGHV3OR16-12A0A075B7B8 117 aa8.92□□□□□ -0.98
LINC00339-213ENST00000642137 IGHV1OR15-1A0A075B7D0 117 aa8.92□□□□□ -0.98
LINC00339-213ENST00000642137 F8W036 122 aa8.92□□□□□ -0.98
LINC00339-213ENST00000642137 K7EN84 100 aa8.92□□□□□ -0.98
LINC00339-213ENST00000642137 SH2D1AO60880 128 aa8.92□□□□□ -0.98
LINC00339-213ENST00000642137 RPL23P62829 140 aaKnown RBP8.92□□□□□ -0.98
LINC00339-213ENST00000642137 TDRG1Q3Y452 100 aa8.92□□□□□ -0.98
LINC00339-213ENST00000642137 FAM159AQ6UWV7 190 aa8.92□□□□□ -0.98
LINC00339-213ENST00000642137 LINC01551Q86U37 167 aa8.92□□□□□ -0.98
LINC00339-213ENST00000642137 OR11H2Q8NH07 326 aa8.92□□□□□ -0.98
LINC00339-213ENST00000642137 DAZAP1Q96EP5 407 aaKnown RBP8.92□□□□□ -0.98
LINC00339-213ENST00000642137 KCNS1Q96KK3 526 aa8.92□□□□□ -0.98
LINC00339-213ENST00000642137 SEC11CQ9BY50 192 aa8.92□□□□□ -0.98
LINC00339-213ENST00000642137 X6R8D5 127 aa8.92□□□□□ -0.98
LINC00339-213ENST00000642137 C19orf71A6NCJ1 209 aa8.91□□□□□ -0.98
LINC00339-213ENST00000642137 OR5I1Q13606 314 aa8.91□□□□□ -0.98
LINC00339-213ENST00000642137 ANXA2RQ3ZCQ2 193 aa8.91□□□□□ -0.98
LINC00339-213ENST00000642137 C10orf91Q5T1B1 145 aa8.91□□□□□ -0.98
LINC00339-213ENST00000642137 PRR27Q6MZM9 219 aa8.91□□□□□ -0.98
LINC00339-213ENST00000642137 FAM231DQ6ZW35 169 aa8.91□□□□□ -0.98
LINC00339-213ENST00000642137 SLC7A5P1Q8MH63 180 aa8.91□□□□□ -0.98
LINC00339-213ENST00000642137 IGKV3D-20A0A0C4DH25 116 aa8.9□□□□□ -0.98
LINC00339-213ENST00000642137 ZNF705GA8MUZ8 300 aaPredicted RBP8.9□□□□□ -0.98
LINC00339-213ENST00000642137 ORM1P02763 201 aa8.9□□□□□ -0.98
LINC00339-213ENST00000642137 MIFP14174 115 aa8.9□□□□□ -0.98
LINC00339-213ENST00000642137 PNRC1Q12796 327 aaPredicted RBP8.9□□□□□ -0.98
LINC00339-213ENST00000642137 RRN3P1Q2M238 152 aa8.9□□□□□ -0.98
LINC00339-213ENST00000642137 LINC01559Q495D7 138 aa8.9□□□□□ -0.98
LINC00339-213ENST00000642137 ZNF493Q6ZR52 646 aa8.9□□□□□ -0.98
LINC00339-213ENST00000642137 NUDT10Q8NFP7 164 aa8.9□□□□□ -0.98
LINC00339-213ENST00000642137 NUDT11Q96G61 164 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms