RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	HLA-DMB	P28068	263 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	GRN	P28799	593 aa	Known RBP	6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	PRDX2	P32119	198 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	FOXA3	P55318	350 aa	Predicted RBP	6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	CACNG7	P62955	275 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	EBI3	Q14213	229 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	DTX2	Q86UW9	622 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	DEFB108B	Q8NET1	73 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	ZNF414	Q96IQ9	312 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	RITA1	Q96K30	269 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	CACNA1D	Q01668	2161 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	IGKV1D-17	A0A075B6S4	117 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	FAM240A	A0A1B0GVK7	77 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	PMS2P5	A8MQ11	134 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	C12orf77	C9JDV5	145 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	IGKV1-39	P01597	117 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	IGKV1D-39	P04432	117 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	RPL13A	P40429	203 aa	Known RBP	6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	ZNRF1	Q8ND25	227 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	OR8A1	Q8NGG7	326 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	IGF2BP2-AS1	Q96M15	143 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	WDR83OS	Q9Y284	106 aa		6.27	□□□□□ -1.41
RTTN-223	ENST00000640931	USP9X	Q93008	2570 aa	Predicted RBP	6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	TLN1	Q9Y490	2541 aa	Known RBP	6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	ZNF785	A8K8V0	405 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931		J3QQQ9	107 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	TIMM23	O14925	209 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	ACTL6B	O94805	426 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	CD40	P25942	277 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	PFN2	P35080	140 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931		Q6ZRM9	215 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	PDPN	Q86YL7	162 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	APRG1	Q8IVJ8	170 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931		Q8N7P7	452 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	LEAP2	Q969E1	77 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	TANC2	Q9HCD6	1990 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	TRBV7-3	A0A075B6L6	115 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	LY6L	H3BQJ8	138 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	PLAU	P00749	431 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	CD3E	P07766	207 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	PLA2G2A	P14555	144 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	BSPH1	Q075Z2	132 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	EXOC3-AS1	Q8N2X6	119 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	HIST1H4G	Q99525	98 aa		6.26	□□□□□ -1.41
RTTN-223	ENST00000640931	TRBV6-6	A0A0A6YYG2	114 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	TRGV8	A0A0C4DH27	118 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	FAM236D	A0A1B0GTK5	79 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	TMEM89	A2RUT3	159 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	HIGD1C	A8MV81	97 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	OXT	P01178	125 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	IGHV1-46	P01743	117 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	APOH	P02749	345 aa	Predicted RBP	6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	LGALS1	P09382	135 aa	Known RBP	6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	FAM236C	P0DP71	79 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	DEFA4	P12838	97 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	LINC00596	Q86U02	117 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	FAM168A	Q92567	244 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	ZMAT4	Q9H898	229 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	TMEM167B	Q9NRX6	74 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	ZNRD1	Q9P1U0	126 aa		6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	DIDO1	Q9BTC0	2240 aa	Known RBP	6.25	□□□□□ -1.41
RTTN-223	ENST00000640931	DYSF	O75923	2080 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	LOC107984156	A0A0G2JMH3	177 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	LINC01548	A6NM66	108 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931		H3BVH4	76 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	SLC25A20	O43772	301 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	IGKC	P01834	107 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	CCL8	P80075	99 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	LCE2C	Q5TA81	110 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	C1orf229	Q6ZS94	237 aa	Predicted RBP	6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	PRIMA1	Q86XR5	153 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	ARL17A	Q8IVW1	177 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931		Q8N1Y9	231 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	DRAM1	Q8N682	238 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	LINC01560	Q8TB33	94 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	TRGV9	Q99603	122 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	ZNF355P	Q9NSJ1	428 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	SLC25A10	Q9UBX3	287 aa	Predicted RBP	6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	PLCE1	Q9P212	2302 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	NBAS	A2RRP1	2371 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	TMSB15B	A0A087X1C1	80 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	TRAV13-1	A0A0B4J241	112 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	TMEM30CP	A0ZSE6	113 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	IGKV1-5	P01602	117 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	BRWD1-AS2	P59051	145 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	PRB3	Q04118	309 aa	Predicted RBP	6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	ZNF816	Q0VGE8	651 aa	Predicted RBP	6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	LINC01559	Q495D7	138 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	SPINK9	Q5DT21	86 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931		Q71RC1	249 aa	Predicted RBP	6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	CCL13	Q99616	98 aa		6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	6.24	□□□□□ -1.41
RTTN-223	ENST00000640931	PKDREJ	Q9NTG1	2253 aa		6.23	□□□□□ -1.41
RTTN-223	ENST00000640931	DCHS2	Q6V1P9	2916 aa		6.23	□□□□□ -1.41
RTTN-223	ENST00000640931	RAI1	Q7Z5J4	1906 aa	Predicted RBP	6.23	□□□□□ -1.41
RTTN-223	ENST00000640931	TRGV11	A0A075B6L2	103 aa		6.23	□□□□□ -1.41
RTTN-223	ENST00000640931		A8MZ25	164 aa		6.23	□□□□□ -1.41
RTTN-223	ENST00000640931		J3QKU1	62 aa		6.23	□□□□□ -1.41
RTTN-223	ENST00000640931	LGALS9	O00182	355 aa		6.23	□□□□□ -1.41
RTTN-223	ENST00000640931	TCL1B	O95988	128 aa		6.23	□□□□□ -1.41

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