RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 M0R3E3 92 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 NCR2O95944 276 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 SMAGPQ0VAQ4 97 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 MTURNQ8N3F0 131 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 DMXL1Q9Y485 3027 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 A0A1B0GV72 72 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 K7EP34 96 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 LINC00310P59036 64 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 PRB3Q04118 309 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-210ENST00000640652 NPIPB6E9PJ23 425 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 EVI2AP22794 236 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 SRSF2Q01130 221 aaKnown RBP4.39□□□□□ -1.71
SCN3A-210ENST00000640652 C1orf229Q6ZS94 237 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-210ENST00000640652 PRSS33Q8NF86 280 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 FAM110DQ8TAY7 271 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-210ENST00000640652 LENEPQ9Y5L5 61 aa4.39□□□□□ -1.71
SCN3A-210ENST00000640652 MRPL53Q96EL3 112 aaKnown RBP4.39□□□□□ -1.71
SCN3A-210ENST00000640652 IGLV11-55A0A075B6I3 123 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 CD24P25063 80 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 RITA1Q96K30 269 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 NDUFA3O95167 84 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 UBE2E1P51965 193 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 ASPHD1Q5U4P2 390 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 Q8N8P6 123 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 ATP6V0BQ99437 205 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 H3BVH4 76 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 CHAC1Q9BUX1 264 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 COL8A2P25067 703 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 TRAV41A0A0B4J266 112 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 LYNX1G3V0Z9 82 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 FRMD6-AS1P0C7T7 363 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 LYNX1P0DP58 116 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 LGALS3P17931 250 aaKnown RBP4.38□□□□□ -1.71
SCN3A-210ENST00000640652 PRSS57Q6UWY2 283 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 KLK15Q9H2R5 256 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 DPH3P1Q9H4G8 78 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 NHP2Q9NX24 153 aaKnown RBP4.38□□□□□ -1.71
SCN3A-210ENST00000640652 ATMQ13315 3056 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 ITPR3Q14573 2671 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 HOXB4P17483 251 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-210ENST00000640652 RNASE4P34096 147 aaKnown RBP4.38□□□□□ -1.71
SCN3A-210ENST00000640652 CHTOPQ9Y3Y2 248 aaKnown RBP4.38□□□□□ -1.71
SCN3A-210ENST00000640652 A0A1W2PPM0 123 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 SAA4P35542 130 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 TMEM158Q8WZ71 300 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 IGSF10Q6WRI0 2623 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 LOC400499M0QZD8 3231 aa4.38□□□□□ -1.71
SCN3A-210ENST00000640652 IGHV3-35A0A0C4DH35 117 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 LOC107984156A0A0G2JMH3 177 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 TMEM213A2RRL7 107 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 F8W1H4 67 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 RPL13AP40429 203 aaKnown RBP4.37□□□□□ -1.71
SCN3A-210ENST00000640652 ARL17AQ8IVW1 177 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 ADGRG4Q8IZF6 3080 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 TMEM8BA6NDV4 472 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 ZZEF1O43149 2961 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 DLX1P56177 255 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 SUMO2P61956 95 aaKnown RBP4.37□□□□□ -1.71
SCN3A-210ENST00000640652 UTF1Q5T230 341 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 GDF5OSQ5U4N7 250 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 IGHV3OR16-8A0A075B7F1 116 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 K7ENP7 123 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 IGLV2-11P01706 119 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 PSMB2P49721 201 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 EFNA4P52798 201 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 ZNF479Q96JC4 524 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 VGLL1Q99990 258 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 U3KQK5 164 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 CRYGBP07316 175 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 HIGD1BQ9P298 99 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 ZNF56Q15929 161 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 GAGE13Q4V321 117 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 FAM120AOSQ5T036 256 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 C8orf86Q6ZUL3 223 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 WI2-2373I1.2A0A1W2PRP0 233 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 KLRD1Q13241 179 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 SPOCK3Q9BQ16 436 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 MEGF9Q9H1U4 602 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 J3KRW8 73 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 APOMO95445 188 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 HLA-DRB4P13762 266 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 TAL2Q16559 108 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 WFDC3Q8IUB2 231 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 DLX4Q92988 240 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-210ENST00000640652 DAZ1Q9NQZ3 744 aaKnown RBP4.37□□□□□ -1.71
SCN3A-210ENST00000640652 HLA-DRB4X5D2U9 266 aa4.37□□□□□ -1.71
SCN3A-210ENST00000640652 IGHV3OR16-13A0A075B7E8 117 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 IGHV3-74A0A0B4J1X5 117 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 C20orf78Q9BR46 151 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 IGHV3-66A0A0C4DH42 116 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 SMKR1H3BMG3 65 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 NDUFS7O75251 213 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 PF4V1P10720 104 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 PRR31Q5SQ13 230 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 ZC2HC1BQ5TFG8 222 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 F8VRH5 84 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 MRPL36Q9P0J6 103 aaKnown RBP4.36□□□□□ -1.71
SCN3A-210ENST00000640652 ITPR1Q14643 2758 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 IGHV3-49A0A0A0MS15 119 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 EGR2P11161 476 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms