RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 CCDC179H3BU77 68 aa6.63□□□□□ -1.35
NECAP1-227ENST00000640648 J3QQQ9 107 aa6.63□□□□□ -1.35
NECAP1-227ENST00000640648 CCL21O00585 134 aa6.63□□□□□ -1.35
NECAP1-227ENST00000640648 XGP55808 180 aa6.63□□□□□ -1.35
NECAP1-227ENST00000640648 TRAV12-2A0A075B6T6 113 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 WIPF3A6NGB9 483 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 JMJD7-PLA2G4BH0Y9G9 81 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 IGHV3-23P01764 117 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 PDE6GP18545 87 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 ZNF138P52744 262 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 TMEM167AQ8TBQ9 72 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 THSD7BQ9C0I4 1608 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 TINCRA0A1B0GVN0 87 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 FAM19A5Q7Z5A7 132 aaPredicted RBP6.62□□□□□ -1.35
NECAP1-227ENST00000640648 TMEM105Q8N8V8 129 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 SSC4DQ8WTU2 575 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 LSM4Q9Y4Z0 139 aaKnown RBP6.62□□□□□ -1.35
NECAP1-227ENST00000640648 TRGV11A0A075B6L2 103 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 NTN3O00634 580 aaPredicted RBP6.62□□□□□ -1.35
NECAP1-227ENST00000640648 TRAV3A0A0B4J244 114 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 TRAV12-3A0A0B4J271 114 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 F6UB75 175 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 PF4P02776 101 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 PHLDA1Q8WV24 401 aaPredicted RBP6.62□□□□□ -1.35
NECAP1-227ENST00000640648 SMIM2Q9BVW6 85 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 TP53TG3Q9ULZ0 132 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 LINC00312Q9Y6C7 94 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 SELENOKQ9Y6D0 94 aa6.62□□□□□ -1.35
NECAP1-227ENST00000640648 NPPCP23582 126 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 C10orf55Q5SWW7 151 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 ZNF474Q6S9Z5 364 aaPredicted RBP6.61□□□□□ -1.35
NECAP1-227ENST00000640648 IGLV3-1P01715 115 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 PSMB8P28062 276 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 C2orf66Q6UXQ4 117 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 NDUFA11Q86Y39 141 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 DKK2Q9UBU2 259 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 PLXNA4Q9HCM2 1894 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 LINC00694P0DN24 101 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 MYOD1P15172 320 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 C2orf91Q6ZV80 131 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 THAP8Q8NA92 274 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 IGHV3-66A0A0C4DH42 116 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 IGKV1-6A0A0C4DH72 117 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 LINC00473A8K010 186 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 M0R381 172 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 TMEM14BQ9NUH8 114 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 SPRR3Q9UBC9 169 aa6.61□□□□□ -1.35
NECAP1-227ENST00000640648 DENND4CQ5VZ89 1909 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 RPL18AQ02543 176 aaKnown RBP6.6□□□□□ -1.35
NECAP1-227ENST00000640648 DAND5Q8N907 189 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 Q0VFX4 171 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 TMEM200BQ69YZ2 307 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 Q8N976 141 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 C21orf62Q9NYP8 219 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 ICOSQ9Y6W8 199 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 IGKV3D-15A0A087WSY6 115 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 RHOHQ15669 191 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 IL17RELQ6ZVW7 336 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 LINC00477Q96M19 166 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 CHCHD5Q9BSY4 110 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 GTF3C1Q12789 2109 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 SPG11Q96JI7 2443 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 TRBV30A0A0K0K1B3 111 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 BAALC-AS2P0C853 105 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 IGLC6P0CF74 106 aa6.6□□□□□ -1.35
NECAP1-227ENST00000640648 CD24P25063 80 aa6.59□□□□□ -1.35
NECAP1-227ENST00000640648 MDFICQ9P1T7 246 aa6.59□□□□□ -1.35
NECAP1-227ENST00000640648 CD28P10747 220 aa6.59□□□□□ -1.35
NECAP1-227ENST00000640648 LINC01560Q8TB33 94 aa6.59□□□□□ -1.35
NECAP1-227ENST00000640648 RNASE2P10153 161 aaKnown RBP6.59□□□□□ -1.35
NECAP1-227ENST00000640648 RS1O15537 224 aa6.59□□□□□ -1.36
NECAP1-227ENST00000640648 IGKV3-15P01624 115 aa6.59□□□□□ -1.36
NECAP1-227ENST00000640648 CFHR2P36980 270 aa6.59□□□□□ -1.36
NECAP1-227ENST00000640648 SHANK2-AS3Q9BTD1 123 aa6.59□□□□□ -1.36
NECAP1-227ENST00000640648 MCRIP2Q9BUT9 160 aaKnown RBP6.59□□□□□ -1.36
NECAP1-227ENST00000640648 SDHAF1A6NFY7 115 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 VPREB1P12018 145 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 BSPH1Q075Z2 132 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 EEF1AKMT3Q96AZ1 226 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 PLXNA2O75051 1894 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 C11orf86A6NJI1 115 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 PFN2P35080 140 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 B3GALT5-AS1P59052 145 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 TNRC6AQ8NDV7 1962 aaKnown RBP6.58□□□□□ -1.36
NECAP1-227ENST00000640648 IGHV1-18A0A0C4DH31 117 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 PKIGQ9Y2B9 76 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 LENEPQ9Y5L5 61 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 IGHV3OR16-10A0A075B7F0 116 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 BCE1O60756 84 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 TCL1BO95988 128 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 CRYGBP07316 175 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 DDB2Q92466 427 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 MBD6Q96DN6 1003 aa6.58□□□□□ -1.36
NECAP1-227ENST00000640648 TRBV7-7A0A0K0K1E9 115 aa6.57□□□□□ -1.36
NECAP1-227ENST00000640648 RSPO1Q2MKA7 263 aaPredicted RBP6.57□□□□□ -1.36
NECAP1-227ENST00000640648 ZFHX2Q9C0A1 2572 aaPredicted RBP6.57□□□□□ -1.36
NECAP1-227ENST00000640648 FREM1Q5H8C1 2179 aa6.57□□□□□ -1.36
NECAP1-227ENST00000640648 MALRD1Q5VYJ5 2156 aa6.57□□□□□ -1.36
NECAP1-227ENST00000640648 A0A0J9YXY3 114 aa6.57□□□□□ -1.36
NECAP1-227ENST00000640648 LYNX1G3V0Z9 82 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms