RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 BPESC1Q9GZL8 116 aa11.28□□□□□ -0.6
SCARB2-221ENST00000640341 AGPAT4-IT1Q9H0P7 198 aa11.28□□□□□ -0.6
SCARB2-221ENST00000640341 SMAD7O15105 426 aaKnown RBP11.27□□□□□ -0.6
SCARB2-221ENST00000640341 BUB3O43684 328 aa11.27□□□□□ -0.6
SCARB2-221ENST00000640341 LGALS9BQ3B8N2 356 aa11.27□□□□□ -0.6
SCARB2-221ENST00000640341 LGALS9CQ6DKI2 356 aa11.27□□□□□ -0.6
SCARB2-221ENST00000640341 RPS20P60866 119 aaKnown RBP11.27□□□□□ -0.61
SCARB2-221ENST00000640341 C11orf21Q9P2W6 132 aa11.27□□□□□ -0.61
SCARB2-221ENST00000640341 CUBNO60494 3623 aa11.27□□□□□ -0.61
SCARB2-221ENST00000640341 FGF6P10767 208 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 BRD3OSQ6XYD6 125 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 RNF185Q96GF1 192 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 IGLC6P0CF74 106 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 NBL1P41271 181 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 LY6DQ14210 128 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 GLMPQ8WWB7 406 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 MYO18BQ8IUG5 2567 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 IGKV3D-20A0A0C4DH25 116 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 H3BVH4 76 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 OCIAD2Q56VL3 154 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 C16orf92Q96LL3 132 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 PKD1L2Q7Z442 2459 aa11.26□□□□□ -0.61
SCARB2-221ENST00000640341 A6NDN8 102 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 M0R381 172 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 SAP30O75446 220 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 IGF1P05019 195 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 ZNF502Q8TBZ5 544 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 CCDC140Q96MF4 163 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 U3KQK5 164 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 IGHV3-11P01762 117 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 FCER1GP30273 86 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 SMIM15Q7Z3B0 74 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 METTL26Q96S19 204 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 SORL1Q92673 2214 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 LY6EQ16553 131 aa11.25□□□□□ -0.61
SCARB2-221ENST00000640341 EFNA4P52798 201 aa11.24□□□□□ -0.61
SCARB2-221ENST00000640341 Q8N6K4 173 aa11.24□□□□□ -0.61
SCARB2-221ENST00000640341 GATD1Q8NB37 220 aa11.24□□□□□ -0.61
SCARB2-221ENST00000640341 JMJD8Q96S16 334 aa11.24□□□□□ -0.61
SCARB2-221ENST00000640341 K7ERJ3 54 aa11.24□□□□□ -0.61
SCARB2-221ENST00000640341 CDKN1BP46527 198 aa11.24□□□□□ -0.61
SCARB2-221ENST00000640341 ZC2HC1BQ5TFG8 222 aa11.24□□□□□ -0.61
SCARB2-221ENST00000640341 LCNL1Q6ZST4 164 aa11.24□□□□□ -0.61
SCARB2-221ENST00000640341 C8orf86Q6ZUL3 223 aa11.24□□□□□ -0.61
SCARB2-221ENST00000640341 ZNF575Q86XF7 245 aa11.24□□□□□ -0.61
SCARB2-221ENST00000640341 BOD1L2Q8IYS8 172 aa11.24□□□□□ -0.61
SCARB2-221ENST00000640341 WFDC12Q8WWY7 111 aa11.24□□□□□ -0.61
SCARB2-221ENST00000640341 TRAV40A0A0B4J280 105 aa11.23□□□□□ -0.61
SCARB2-221ENST00000640341 A0A0G2JLM5 398 aa11.23□□□□□ -0.61
SCARB2-221ENST00000640341 SEC11AP67812 179 aa11.23□□□□□ -0.61
SCARB2-221ENST00000640341 C11orf71Q6IPW1 123 aa11.23□□□□□ -0.61
SCARB2-221ENST00000640341 ZFAND3Q9H8U3 227 aa11.23□□□□□ -0.61
SCARB2-221ENST00000640341 USP9YO00507 2555 aaPredicted RBP11.23□□□□□ -0.61
SCARB2-221ENST00000640341 CRYBG3Q68DQ2 2970 aa11.23□□□□□ -0.61
SCARB2-221ENST00000640341 SRD5A1P18405 259 aa11.23□□□□□ -0.61
SCARB2-221ENST00000640341 S100A4P26447 101 aaKnown RBP11.23□□□□□ -0.61
SCARB2-221ENST00000640341 KLRB1Q12918 225 aa11.23□□□□□ -0.61
SCARB2-221ENST00000640341 MINOS1Q5TGZ0 78 aa11.23□□□□□ -0.61
SCARB2-221ENST00000640341 FAM110DQ8TAY7 271 aaPredicted RBP11.23□□□□□ -0.61
SCARB2-221ENST00000640341 MINOS1-NBL1R4GNA1 71 aa11.23□□□□□ -0.61
SCARB2-221ENST00000640341 TMEM8BA6NDV4 472 aa11.22□□□□□ -0.61
SCARB2-221ENST00000640341 FBXL19-AS1Q494R0 122 aa11.22□□□□□ -0.61
SCARB2-221ENST00000640341 ZNF48Q96MX3 618 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-221ENST00000640341 SMIM17P0DL12 118 aa11.22□□□□□ -0.61
SCARB2-221ENST00000640341 EEF1AKMT3Q96AZ1 226 aa11.22□□□□□ -0.61
SCARB2-221ENST00000640341 SIRPDQ9H106 197 aa11.22□□□□□ -0.61
SCARB2-221ENST00000640341 CLPSL1A2RUU4 121 aa11.22□□□□□ -0.61
SCARB2-221ENST00000640341 RIPPLY3P57055 190 aa11.22□□□□□ -0.61
SCARB2-221ENST00000640341 HSD52Q0P140 79 aa11.22□□□□□ -0.61
SCARB2-221ENST00000640341 OR2K2Q8NGT1 345 aa11.22□□□□□ -0.61
SCARB2-221ENST00000640341 TRBV12-3P01733 135 aa11.21□□□□□ -0.62
SCARB2-221ENST00000640341 IGKCP01834 107 aa11.21□□□□□ -0.62
SCARB2-221ENST00000640341 NXT2Q9NPJ8 142 aaKnown RBP11.21□□□□□ -0.62
SCARB2-221ENST00000640341 MRPL35Q9NZE8 188 aaKnown RBP11.21□□□□□ -0.62
SCARB2-221ENST00000640341 F6UB75 175 aa11.21□□□□□ -0.62
SCARB2-221ENST00000640341 ATP5G2Q06055 141 aa11.21□□□□□ -0.62
SCARB2-221ENST00000640341 ODF1Q14990 250 aa11.21□□□□□ -0.62
SCARB2-221ENST00000640341 OR1N2Q8NGR9 330 aa11.21□□□□□ -0.62
SCARB2-221ENST00000640341 MEGF9Q9H1U4 602 aa11.21□□□□□ -0.62
SCARB2-221ENST00000640341 CELSR2Q9HCU4 2923 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 PPBPP02775 128 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 MGPP08493 103 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 FXYD2P54710 66 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 GTF2H5Q6ZYL4 71 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 MYOZ3Q8TDC0 251 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 NHP2Q9NX24 153 aaKnown RBP11.2□□□□□ -0.62
SCARB2-221ENST00000640341 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 C9orf118A6NHY6 69 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 UBE2E1P51965 193 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 PAX8Q06710 450 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 SLC50A1Q9BRV3 221 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 SPCS1Q9Y6A9 102 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 POLQO75417 2590 aa11.2□□□□□ -0.62
SCARB2-221ENST00000640341 OR9G4Q8NGQ1 327 aa11.19□□□□□ -0.62
SCARB2-221ENST00000640341 LINC01559Q495D7 138 aa11.19□□□□□ -0.62
SCARB2-221ENST00000640341 PRR9Q5T870 116 aa11.19□□□□□ -0.62
SCARB2-221ENST00000640341 UNQ9165/PRO28630Q6UXU0 137 aa11.19□□□□□ -0.62
SCARB2-221ENST00000640341 ADAMTSL5Q6ZMM2 481 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms