RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 IGHV1-24A0A0C4DH33 117 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 FABP5P3A8MUU1 101 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 IGLV1-40P01703 118 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 RAB4AP20338 218 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 CTRLP40313 264 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 C10orf99Q6UWK7 81 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 C8orf86Q6ZUL3 223 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 USMG5Q96IX5 58 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 PMCHL1Q16048 86 aa11.53□□□□□ -0.56
TRIM3-215ENST00000639856 TMEM213A2RRL7 107 aa11.53□□□□□ -0.56
TRIM3-215ENST00000639856 ZNF575Q86XF7 245 aa11.53□□□□□ -0.56
TRIM3-215ENST00000639856 FER1L6-AS1Q8NA97 138 aa11.53□□□□□ -0.56
TRIM3-215ENST00000639856 CLEC5AQ9NY25 188 aa11.53□□□□□ -0.56
TRIM3-215ENST00000639856 NDUFA4O00483 81 aa11.52□□□□□ -0.57
TRIM3-215ENST00000639856 IGLC6P0CF74 106 aa11.52□□□□□ -0.57
TRIM3-215ENST00000639856 SPATA45Q537H7 98 aa11.52□□□□□ -0.57
TRIM3-215ENST00000639856 ZNF705AQ6ZN79 300 aaPredicted RBP11.52□□□□□ -0.57
TRIM3-215ENST00000639856 GLMPQ8WWB7 406 aa11.52□□□□□ -0.57
TRIM3-215ENST00000639856 AGPAT4-IT1Q9H0P7 198 aa11.52□□□□□ -0.57
TRIM3-215ENST00000639856 EREGO14944 169 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 ORM1P02763 201 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 ZNF138P52744 262 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 KRTAP1-1Q07627 177 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 FAM104BQ5XKR9 115 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 FOXC2Q99958 501 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 TMEM70Q9BUB7 260 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 SNHG12Q9BXW3 62 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 LEPROTL1O95214 131 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 CSN3P07498 182 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 OR5AL1P0C617 328 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 UNQ9165/PRO28630Q6UXU0 137 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 NOTCH2Q04721 2471 aa11.51□□□□□ -0.57
TRIM3-215ENST00000639856 M0R143 59 aa11.5□□□□□ -0.57
TRIM3-215ENST00000639856 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
TRIM3-215ENST00000639856 TMEM78Q5T7P6 136 aa11.5□□□□□ -0.57
TRIM3-215ENST00000639856 AKAP9Q99996 3911 aa11.5□□□□□ -0.57
TRIM3-215ENST00000639856 LINC01559Q495D7 138 aa11.5□□□□□ -0.57
TRIM3-215ENST00000639856 C9orf47Q6ZRZ4 202 aa11.5□□□□□ -0.57
TRIM3-215ENST00000639856 AMN1Q8IY45 258 aa11.5□□□□□ -0.57
TRIM3-215ENST00000639856 ATOH7Q8N100 152 aa11.5□□□□□ -0.57
TRIM3-215ENST00000639856 OR4X2Q8NGF9 303 aa11.5□□□□□ -0.57
TRIM3-215ENST00000639856 ZNF702PQ9H963 129 aa11.5□□□□□ -0.57
TRIM3-215ENST00000639856 ZNF580Q9UK33 172 aa11.5□□□□□ -0.57
TRIM3-215ENST00000639856 U3KQK5 164 aa11.5□□□□□ -0.57
TRIM3-215ENST00000639856 MTORP42345 2549 aa11.49□□□□□ -0.57
TRIM3-215ENST00000639856 MUC21A0A0G2JKD1 596 aa11.49□□□□□ -0.57
TRIM3-215ENST00000639856 MUC21A0A140T8X8 626 aa11.49□□□□□ -0.57
TRIM3-215ENST00000639856 MUC21Q5SSG8 566 aa11.49□□□□□ -0.57
TRIM3-215ENST00000639856 C16orf92Q96LL3 132 aa11.49□□□□□ -0.57
TRIM3-215ENST00000639856 CNFNQ9BYD5 112 aa11.49□□□□□ -0.57
TRIM3-215ENST00000639856 AP5S1Q9NUS5 200 aa11.49□□□□□ -0.57
TRIM3-215ENST00000639856 D6R8Y8 96 aa11.48□□□□□ -0.57
TRIM3-215ENST00000639856 PSMB8P28062 276 aa11.48□□□□□ -0.57
TRIM3-215ENST00000639856 TWIST1Q15672 202 aa11.48□□□□□ -0.57
TRIM3-215ENST00000639856 LINC00173Q6ZV60 143 aa11.48□□□□□ -0.57
TRIM3-215ENST00000639856 MRPL52Q86TS9 123 aaKnown RBP11.48□□□□□ -0.57
TRIM3-215ENST00000639856 PPP1R14DQ9NXH3 145 aa11.48□□□□□ -0.57
TRIM3-215ENST00000639856 A0A0G2JLM5 398 aa11.48□□□□□ -0.57
TRIM3-215ENST00000639856 HIST1H1AQ02539 215 aaPredicted RBP11.48□□□□□ -0.57
TRIM3-215ENST00000639856 SPATA12Q7Z6I5 190 aa11.48□□□□□ -0.57
TRIM3-215ENST00000639856 ORMDL3Q8N138 153 aa11.48□□□□□ -0.57
TRIM3-215ENST00000639856 KLHDC1Q8N7A1 406 aa11.48□□□□□ -0.57
TRIM3-215ENST00000639856 PRSS3P2Q8NHM4 247 aa11.48□□□□□ -0.57
TRIM3-215ENST00000639856 NPFFR1Q9GZQ6 430 aa11.48□□□□□ -0.57
TRIM3-215ENST00000639856 SYS1-DBNDD2H3BUS1 97 aa11.47□□□□□ -0.57
TRIM3-215ENST00000639856 IGLC3P0DOY3 106 aa11.47□□□□□ -0.57
TRIM3-215ENST00000639856 MRPL51Q4U2R6 128 aaKnown RBP11.47□□□□□ -0.57
TRIM3-215ENST00000639856 PRELID3AQ96N28 172 aa11.47□□□□□ -0.57
TRIM3-215ENST00000639856 TRAV9-2A0A087WT02 112 aa11.47□□□□□ -0.57
TRIM3-215ENST00000639856 FA2HQ7L5A8 372 aa11.47□□□□□ -0.57
TRIM3-215ENST00000639856 GPHB5Q86YW7 130 aa11.47□□□□□ -0.57
TRIM3-215ENST00000639856 TMEM191AQ9H0A3 160 aa11.47□□□□□ -0.57
TRIM3-215ENST00000639856 IGKV3D-20A0A0C4DH25 116 aa11.46□□□□□ -0.57
TRIM3-215ENST00000639856 MAJINQ3KP22 176 aa11.46□□□□□ -0.57
TRIM3-215ENST00000639856 UQCR10Q9UDW1 63 aa11.46□□□□□ -0.57
TRIM3-215ENST00000639856 HSPB8Q9UJY1 196 aa11.46□□□□□ -0.57
TRIM3-215ENST00000639856 C20orf202A1L168 122 aa11.45□□□□□ -0.58
TRIM3-215ENST00000639856 RPLP1P05386 114 aaKnown RBP11.45□□□□□ -0.58
TRIM3-215ENST00000639856 IFI27P40305 119 aaPredicted RBP11.45□□□□□ -0.58
TRIM3-215ENST00000639856 C20orf173Q96LM9 149 aa11.45□□□□□ -0.58
TRIM3-215ENST00000639856 MAP1LC3CQ9BXW4 147 aa11.45□□□□□ -0.58
TRIM3-215ENST00000639856 C11orf21Q9P2W6 132 aa11.45□□□□□ -0.58
TRIM3-215ENST00000639856 NF1P21359 2839 aa11.45□□□□□ -0.58
TRIM3-215ENST00000639856 TCAPO15273 167 aa11.45□□□□□ -0.58
TRIM3-215ENST00000639856 ZNF738Q8NE65 137 aa11.45□□□□□ -0.58
TRIM3-215ENST00000639856 YAE1D1Q9NRH1 226 aa11.45□□□□□ -0.58
TRIM3-215ENST00000639856 SIGLEC8Q9NYZ4 499 aa11.45□□□□□ -0.58
TRIM3-215ENST00000639856 MSRB1Q9NZV6 116 aa11.45□□□□□ -0.58
TRIM3-215ENST00000639856 LENEPQ9Y5L5 61 aa11.45□□□□□ -0.58
TRIM3-215ENST00000639856 OR4C46A6NHA9 309 aa11.44□□□□□ -0.58
TRIM3-215ENST00000639856 SOCS3O14543 225 aa11.44□□□□□ -0.58
TRIM3-215ENST00000639856 CD5LO43866 347 aa11.44□□□□□ -0.58
TRIM3-215ENST00000639856 OR10AG1Q8NH19 301 aa11.44□□□□□ -0.58
TRIM3-215ENST00000639856 CKS2P33552 79 aa11.44□□□□□ -0.58
TRIM3-215ENST00000639856 LOC389332A0A1B0GUA5 103 aa11.43□□□□□ -0.58
TRIM3-215ENST00000639856 IGLL1P15814 213 aa11.43□□□□□ -0.58
TRIM3-215ENST00000639856 PET117Q6UWS5 81 aa11.43□□□□□ -0.58
TRIM3-215ENST00000639856 PEF1Q9UBV8 284 aaKnown RBP11.43□□□□□ -0.58
TRIM3-215ENST00000639856 CUBNO60494 3623 aa11.43□□□□□ -0.58
TRIM3-215ENST00000639856 IGHV7-4-1A0A0J9YVY3 117 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms