RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 MSRB1Q9NZV6 116 aa16.38■□□□□ 0.21
CLN6-224ENST00000638076 C11orf21Q9P2W6 132 aa16.38■□□□□ 0.21
CLN6-224ENST00000638076 MAJINQ3KP22 176 aa16.37■□□□□ 0.21
CLN6-224ENST00000638076 PRELID3AQ96N28 172 aa16.37■□□□□ 0.21
CLN6-224ENST00000638076 CNFNQ9BYD5 112 aa16.37■□□□□ 0.21
CLN6-224ENST00000638076 OR5AL1P0C617 328 aa16.37■□□□□ 0.21
CLN6-224ENST00000638076 RPL11P62913 178 aaKnown RBP16.37■□□□□ 0.21
CLN6-224ENST00000638076 LOXL1Q08397 574 aaPredicted RBP16.37■□□□□ 0.21
CLN6-224ENST00000638076 TM4SF20Q53R12 229 aa16.37■□□□□ 0.21
CLN6-224ENST00000638076 PPP1R14DQ9NXH3 145 aa16.37■□□□□ 0.21
CLN6-224ENST00000638076 ZNF580Q9UK33 172 aa16.37■□□□□ 0.21
CLN6-224ENST00000638076 SOCS3O14543 225 aa16.36■□□□□ 0.21
CLN6-224ENST00000638076 CRXO43186 299 aaPredicted RBP16.36■□□□□ 0.21
CLN6-224ENST00000638076 CYB5R2Q6BCY4 276 aa16.36■□□□□ 0.21
CLN6-224ENST00000638076 FA2HQ7L5A8 372 aa16.36■□□□□ 0.21
CLN6-224ENST00000638076 LRRK2Q5S007 2527 aa16.36■□□□□ 0.21
CLN6-224ENST00000638076 M0R143 59 aa16.36■□□□□ 0.21
CLN6-224ENST00000638076 IFI27P40305 119 aaPredicted RBP16.36■□□□□ 0.21
CLN6-224ENST00000638076 POLQO75417 2590 aa16.35■□□□□ 0.21
CLN6-224ENST00000638076 IGHV7-4-1A0A0J9YVY3 117 aa16.35■□□□□ 0.21
CLN6-224ENST00000638076 LOC389332A0A1B0GUA5 103 aa16.35■□□□□ 0.21
CLN6-224ENST00000638076 SYS1-DBNDD2H3BUS1 97 aa16.35■□□□□ 0.21
CLN6-224ENST00000638076 RHPN1-AS1Q9BWJ2 59 aa16.35■□□□□ 0.21
CLN6-224ENST00000638076 TMEM191AQ9H0A3 160 aa16.35■□□□□ 0.21
CLN6-224ENST00000638076 PEF1Q9UBV8 284 aaKnown RBP16.35■□□□□ 0.21
CLN6-224ENST00000638076 TIMM8BQ9Y5J9 83 aaPredicted RBP16.35■□□□□ 0.21
CLN6-224ENST00000638076 PSMB8P28062 276 aa16.35■□□□□ 0.21
CLN6-224ENST00000638076 FOXE3Q13461 319 aa16.35■□□□□ 0.21
CLN6-224ENST00000638076 Q6ZQT7 251 aa16.35■□□□□ 0.21
CLN6-224ENST00000638076 DAZ1Q9NQZ3 744 aaKnown RBP16.35■□□□□ 0.21
CLN6-224ENST00000638076 USP9YO00507 2555 aaPredicted RBP16.34■□□□□ 0.21
CLN6-224ENST00000638076 C10orf99Q6UWK7 81 aa16.34■□□□□ 0.21
CLN6-224ENST00000638076 SIGLEC8Q9NYZ4 499 aa16.34■□□□□ 0.21
CLN6-224ENST00000638076 IGKV3-7A0A075B6H7 116 aa16.34■□□□□ 0.21
CLN6-224ENST00000638076 SMKR1H3BMG3 65 aa16.34■□□□□ 0.21
CLN6-224ENST00000638076 IGHV4-31P0DP07 118 aa16.34■□□□□ 0.21
CLN6-224ENST00000638076 CKS2P33552 79 aa16.34■□□□□ 0.21
CLN6-224ENST00000638076 TRAV9-2A0A087WT02 112 aa16.33■□□□□ 0.2
CLN6-224ENST00000638076 IGLC3P0DOY3 106 aa16.33■□□□□ 0.2
CLN6-224ENST00000638076 FAM106AQ4KMX7 169 aa16.33■□□□□ 0.2
CLN6-224ENST00000638076 HSPB8Q9UJY1 196 aa16.33■□□□□ 0.2
CLN6-224ENST00000638076 SELENOKQ9Y6D0 94 aa16.33■□□□□ 0.2
CLN6-224ENST00000638076 PRR9Q5T870 116 aa16.33■□□□□ 0.2
CLN6-224ENST00000638076 MAP1LC3CQ9BXW4 147 aa16.33■□□□□ 0.2
CLN6-224ENST00000638076 ZANQ9Y493 2812 aa16.32■□□□□ 0.2
CLN6-224ENST00000638076 DEFB1P60022 68 aa16.32■□□□□ 0.2
CLN6-224ENST00000638076 KLHDC1Q8N7A1 406 aa16.32■□□□□ 0.2
CLN6-224ENST00000638076 OR10J6PQ8NGY7 276 aa16.32■□□□□ 0.2
CLN6-224ENST00000638076 RNF185Q96GF1 192 aa16.32■□□□□ 0.2
CLN6-224ENST00000638076 LENEPQ9Y5L5 61 aa16.32■□□□□ 0.2
CLN6-224ENST00000638076 OR4C46A6NHA9 309 aa16.31■□□□□ 0.2
CLN6-224ENST00000638076 OVOL1O14753 267 aa16.31■□□□□ 0.2
CLN6-224ENST00000638076 NCR2O95944 276 aa16.31■□□□□ 0.2
CLN6-224ENST00000638076 DEFB113Q30KQ7 82 aa16.31■□□□□ 0.2
CLN6-224ENST00000638076 LINC00477Q96M19 166 aa16.31■□□□□ 0.2
CLN6-224ENST00000638076 UQCR10Q9UDW1 63 aa16.31■□□□□ 0.2
CLN6-224ENST00000638076 CENPEQ02224 2701 aa16.31■□□□□ 0.2
CLN6-224ENST00000638076 NPYP01303 97 aa16.31■□□□□ 0.2
CLN6-224ENST00000638076 EDN2P20800 178 aa16.31■□□□□ 0.2
CLN6-224ENST00000638076 OR10AG1Q8NH19 301 aa16.31■□□□□ 0.2
CLN6-224ENST00000638076 SMPXQ9UHP9 88 aa16.31■□□□□ 0.2
CLN6-224ENST00000638076 J3KRW8 73 aa16.3■□□□□ 0.2
CLN6-224ENST00000638076 Q5PR19 223 aa16.3■□□□□ 0.2
CLN6-224ENST00000638076 PRSS57Q6UWY2 283 aa16.3■□□□□ 0.2
CLN6-224ENST00000638076 VPREB3Q9UKI3 123 aa16.3■□□□□ 0.2
CLN6-224ENST00000638076 C20orf202A1L168 122 aa16.3■□□□□ 0.2
CLN6-224ENST00000638076 FSHBP01225 129 aa16.3■□□□□ 0.2
CLN6-224ENST00000638076 BEX4Q9NWD9 120 aaPredicted RBP16.3■□□□□ 0.2
CLN6-224ENST00000638076 H0Y8G0 127 aa16.29■□□□□ 0.2
CLN6-224ENST00000638076 K7EMT4 169 aa16.29■□□□□ 0.2
CLN6-224ENST00000638076 IGLL1P15814 213 aa16.29■□□□□ 0.2
CLN6-224ENST00000638076 SRD5A1P18405 259 aa16.28■□□□□ 0.2
CLN6-224ENST00000638076 PET117Q6UWS5 81 aa16.28■□□□□ 0.2
CLN6-224ENST00000638076 Q6YL49 198 aa16.28■□□□□ 0.2
CLN6-224ENST00000638076 MRPL52Q86TS9 123 aaKnown RBP16.28■□□□□ 0.2
CLN6-224ENST00000638076 A0A096LNJ9 63 aa16.28■□□□□ 0.2
CLN6-224ENST00000638076 F6UB75 175 aa16.28■□□□□ 0.2
CLN6-224ENST00000638076 ZFAND2AQ8N6M9 145 aa16.28■□□□□ 0.2
CLN6-224ENST00000638076 MCRIP2Q9BUT9 160 aaKnown RBP16.28■□□□□ 0.2
CLN6-224ENST00000638076 ZNF747Q9BV97 191 aa16.28■□□□□ 0.2
CLN6-224ENST00000638076 RPLP1P05386 114 aaKnown RBP16.27■□□□□ 0.2
CLN6-224ENST00000638076 Q6ZN92 141 aa16.27■□□□□ 0.2
CLN6-224ENST00000638076 PTPN13Q12923 2485 aa16.27■□□□□ 0.2
CLN6-224ENST00000638076 TMEM89A2RUT3 159 aa16.27■□□□□ 0.19
CLN6-224ENST00000638076 GAS8-AS1O95177 125 aa16.27■□□□□ 0.19
CLN6-224ENST00000638076 LRRC75A-AS1Q8N1F1 130 aa16.27■□□□□ 0.19
CLN6-224ENST00000638076 CR1P17927 2039 aa16.26■□□□□ 0.19
CLN6-224ENST00000638076 PPBPP02775 128 aa16.26■□□□□ 0.19
CLN6-224ENST00000638076 OR8A1Q8NGG7 326 aa16.26■□□□□ 0.19
CLN6-224ENST00000638076 TCAPO15273 167 aa16.25■□□□□ 0.19
CLN6-224ENST00000638076 TCF21O43680 179 aa16.25■□□□□ 0.19
CLN6-224ENST00000638076 EVI2AP22794 236 aa16.25■□□□□ 0.19
CLN6-224ENST00000638076 FXYD7P58549 80 aa16.25■□□□□ 0.19
CLN6-224ENST00000638076 NUTF2P61970 127 aaKnown RBP16.25■□□□□ 0.19
CLN6-224ENST00000638076 Q96MF0 132 aa16.25■□□□□ 0.19
CLN6-224ENST00000638076 UFC1Q9Y3C8 167 aa16.25■□□□□ 0.19
CLN6-224ENST00000638076 HOXA3O43365 443 aaPredicted RBP16.24■□□□□ 0.19
CLN6-224ENST00000638076 SNAI2O43623 268 aa16.24■□□□□ 0.19
CLN6-224ENST00000638076 EPG5Q9HCE0 2579 aa16.24■□□□□ 0.19
CLN6-224ENST00000638076 TRAV21A0A0B4J279 112 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms