RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 PEF1Q9UBV8 284 aaKnown RBP11.65□□□□□ -0.54
SCN8A-214ENST00000637709 LOC389332A0A1B0GUA5 103 aa11.65□□□□□ -0.54
SCN8A-214ENST00000637709 FXYD7P58549 80 aa11.65□□□□□ -0.54
SCN8A-214ENST00000637709 TWIST1Q15672 202 aa11.65□□□□□ -0.54
SCN8A-214ENST00000637709 TMEM78Q5T7P6 136 aa11.65□□□□□ -0.54
SCN8A-214ENST00000637709 NDFIP1Q9BT67 221 aa11.65□□□□□ -0.54
SCN8A-214ENST00000637709 MCRIP2Q9BUT9 160 aaKnown RBP11.65□□□□□ -0.54
SCN8A-214ENST00000637709 PAM16Q9Y3D7 125 aa11.65□□□□□ -0.54
SCN8A-214ENST00000637709 J3QLI3 93 aa11.64□□□□□ -0.55
SCN8A-214ENST00000637709 M0R2Z0 102 aa11.64□□□□□ -0.55
SCN8A-214ENST00000637709 GAS8-AS1O95177 125 aa11.64□□□□□ -0.55
SCN8A-214ENST00000637709 Q6YL49 198 aa11.64□□□□□ -0.55
SCN8A-214ENST00000637709 A0A0G2JLM5 398 aa11.64□□□□□ -0.55
SCN8A-214ENST00000637709 NCR2O95944 276 aa11.64□□□□□ -0.55
SCN8A-214ENST00000637709 S100A7P31151 101 aa11.64□□□□□ -0.55
SCN8A-214ENST00000637709 IGKV3D-20A0A0C4DH25 116 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 H0Y8G0 127 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 C3orf79P0CE67 100 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 FAM106AQ4KMX7 169 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 FER1L6-AS1Q8NA97 138 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 ZNF702PQ9H963 129 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 FAM231BA6NCW3 169 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 TSTD3H0UI37 97 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 PLA2G2AP14555 144 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 DDTP30046 118 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 SYNJ2BPP57105 145 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 PKIAP61925 76 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 HIST1H1AQ02539 215 aaPredicted RBP11.63□□□□□ -0.55
SCN8A-214ENST00000637709 RIGQ13278 110 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 MAJINQ3KP22 176 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 C11orf44Q8N8P7 122 aa11.63□□□□□ -0.55
SCN8A-214ENST00000637709 DAZ1Q9NQZ3 744 aaKnown RBP11.63□□□□□ -0.55
SCN8A-214ENST00000637709 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
SCN8A-214ENST00000637709 FABP5P3A8MUU1 101 aa11.62□□□□□ -0.55
SCN8A-214ENST00000637709 D6R8Y8 96 aa11.62□□□□□ -0.55
SCN8A-214ENST00000637709 FSHBP01225 129 aa11.62□□□□□ -0.55
SCN8A-214ENST00000637709 H3BUA1 57 aa11.62□□□□□ -0.55
SCN8A-214ENST00000637709 IGKV3-20P01619 116 aa11.61□□□□□ -0.55
SCN8A-214ENST00000637709 KLF5Q13887 457 aaPredicted RBP11.61□□□□□ -0.55
SCN8A-214ENST00000637709 KHDC1LQ5JSQ8 128 aa11.61□□□□□ -0.55
SCN8A-214ENST00000637709 CYB5R2Q6BCY4 276 aa11.61□□□□□ -0.55
SCN8A-214ENST00000637709 EBLN2Q6P2I7 272 aa11.61□□□□□ -0.55
SCN8A-214ENST00000637709 SPATA12Q7Z6I5 190 aa11.61□□□□□ -0.55
SCN8A-214ENST00000637709 Q8N976 141 aa11.61□□□□□ -0.55
SCN8A-214ENST00000637709 BORCS7Q96B45 105 aa11.61□□□□□ -0.55
SCN8A-214ENST00000637709 IGHV4OR15-8A0A075B7B6 117 aa11.61□□□□□ -0.55
SCN8A-214ENST00000637709 A0A087WW49 117 aa11.61□□□□□ -0.55
SCN8A-214ENST00000637709 SOCS3O14543 225 aa11.61□□□□□ -0.55
SCN8A-214ENST00000637709 FAM209BQ5JX69 171 aa11.61□□□□□ -0.55
SCN8A-214ENST00000637709 BMI1P35226 326 aa11.6□□□□□ -0.55
SCN8A-214ENST00000637709 IGHV1-24A0A0C4DH33 117 aa11.6□□□□□ -0.55
SCN8A-214ENST00000637709 OR10AG1Q8NH19 301 aa11.6□□□□□ -0.55
SCN8A-214ENST00000637709 NOTCH3Q9UM47 2321 aa11.59□□□□□ -0.55
SCN8A-214ENST00000637709 C14orf144Q96I85 54 aa11.59□□□□□ -0.55
SCN8A-214ENST00000637709 SMPXQ9UHP9 88 aa11.59□□□□□ -0.55
SCN8A-214ENST00000637709 SETXQ7Z333 2677 aaKnown RBP11.59□□□□□ -0.55
SCN8A-214ENST00000637709 ANK3Q12955 4377 aaKnown RBP11.59□□□□□ -0.55
SCN8A-214ENST00000637709 OTOGQ6ZRI0 2925 aa11.59□□□□□ -0.55
SCN8A-214ENST00000637709 GATA1P15976 413 aaPredicted RBP11.59□□□□□ -0.55
SCN8A-214ENST00000637709 IFI27P40305 119 aaPredicted RBP11.59□□□□□ -0.55
SCN8A-214ENST00000637709 DEFA6Q01524 100 aa11.59□□□□□ -0.55
SCN8A-214ENST00000637709 C9orf139Q6ZV77 190 aa11.59□□□□□ -0.55
SCN8A-214ENST00000637709 PSMG3-AS1Q96PY0 264 aa11.59□□□□□ -0.55
SCN8A-214ENST00000637709 ZNF688P0C7X2 276 aa11.58□□□□□ -0.56
SCN8A-214ENST00000637709 LINC00614P0C842 121 aa11.58□□□□□ -0.56
SCN8A-214ENST00000637709 IGLC6P0CF74 106 aa11.58□□□□□ -0.56
SCN8A-214ENST00000637709 JMJD1CQ15652 2540 aa11.58□□□□□ -0.56
SCN8A-214ENST00000637709 RBAKDNA6NC62 111 aa11.58□□□□□ -0.56
SCN8A-214ENST00000637709 H3BVH4 76 aa11.58□□□□□ -0.56
SCN8A-214ENST00000637709 J3QKU1 62 aa11.58□□□□□ -0.56
SCN8A-214ENST00000637709 RNASE4P34096 147 aaKnown RBP11.58□□□□□ -0.56
SCN8A-214ENST00000637709 SLURP1P55000 103 aa11.58□□□□□ -0.56
SCN8A-214ENST00000637709 MRPL51Q4U2R6 128 aaKnown RBP11.58□□□□□ -0.56
SCN8A-214ENST00000637709 C9orf47Q6ZRZ4 202 aa11.58□□□□□ -0.56
SCN8A-214ENST00000637709 COX8CQ7Z4L0 72 aa11.58□□□□□ -0.56
SCN8A-214ENST00000637709 LRRC75A-AS1Q8N1F1 130 aa11.58□□□□□ -0.56
SCN8A-214ENST00000637709 PMCHL2Q9BQD1 86 aa11.58□□□□□ -0.56
SCN8A-214ENST00000637709 EVI2AP22794 236 aa11.57□□□□□ -0.56
SCN8A-214ENST00000637709 PRSS57Q6UWY2 283 aa11.57□□□□□ -0.56
SCN8A-214ENST00000637709 TRAV26-2A0A0B4J265 109 aa11.57□□□□□ -0.56
SCN8A-214ENST00000637709 HOXD3P31249 432 aaPredicted RBP11.57□□□□□ -0.56
SCN8A-214ENST00000637709 OR10J6PQ8NGY7 276 aa11.57□□□□□ -0.56
SCN8A-214ENST00000637709 TP73-AS1Q9UF72 201 aa11.57□□□□□ -0.56
SCN8A-214ENST00000637709 FAM104BQ5XKR9 115 aa11.56□□□□□ -0.56
SCN8A-214ENST00000637709 ATP6V0BQ99437 205 aa11.56□□□□□ -0.56
SCN8A-214ENST00000637709 BRI3O95415 125 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 CTRLP40313 264 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 LINC01559Q495D7 138 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 Q6AWC8 147 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 ZFAND2AQ8N6M9 145 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 VAMP8Q9BV40 100 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 UFC1Q9Y3C8 167 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 NPYP01303 97 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 PSMG4Q5JS54 123 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 ARL6IP6Q8N6S5 226 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 KLHDC1Q8N7A1 406 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 PRSS3P2Q8NHM4 247 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 SMR3AQ99954 134 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 MS4A6AQ9H2W1 248 aa11.55□□□□□ -0.56
SCN8A-214ENST00000637709 MUC4Q99102 2169 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms