RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	CACNA1E	Q15878	2313 aa		4.2	□□□□□ -1.74
RYR3-223	ENST00000636845		A8MZ25	164 aa		4.2	□□□□□ -1.74
RYR3-223	ENST00000636845		H7C2G1	150 aa		4.2	□□□□□ -1.74
RYR3-223	ENST00000636845		J3QL48	77 aa		4.2	□□□□□ -1.74
RYR3-223	ENST00000636845	CRLF1	O75462	422 aa		4.2	□□□□□ -1.74
RYR3-223	ENST00000636845	BRI3	O95415	125 aa		4.2	□□□□□ -1.74
RYR3-223	ENST00000636845	ID1	P41134	155 aa		4.2	□□□□□ -1.74
RYR3-223	ENST00000636845	UBE2D1	P51668	147 aa		4.2	□□□□□ -1.74
RYR3-223	ENST00000636845	NDUFA11	Q86Y39	141 aa		4.2	□□□□□ -1.74
RYR3-223	ENST00000636845	TNRC18	O15417	2968 aa	Predicted RBP	4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	TRAV8-4	A0A0B4J246	113 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	IGLV2-23	P01705	113 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	IGLC6	P0CF74	106 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	SLC25A16	P16260	332 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	TNFAIP6	P98066	277 aa	Predicted RBP	4.19	□□□□□ -1.74
RYR3-223	ENST00000636845		Q1RN00	199 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	C15orf53	Q8NAA6	179 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	GAFA1	Q96PS6	74 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	SPRY4	Q9C004	299 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	BEX4	Q9NWD9	120 aa	Predicted RBP	4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	TRANK1	O15050	2925 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	TRAV26-2	A0A0B4J265	109 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	LINC01546	A6NGU7	62 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845		H3BRN7	92 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	LCE2B	O14633	110 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	LHB	P01229	141 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	IGKV1-17	P01599	117 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	RPL7	P18124	248 aa	Known RBP	4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	PDE6H	Q13956	83 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	TMEM155	Q4W5P6	130 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	C1orf210	Q8IVY1	113 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	C10orf126	Q8N4M7	172 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	NTN5	Q8WTR8	489 aa	Predicted RBP	4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	CCDC140	Q96MF4	163 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	SIRPD	Q9H106	197 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	SPRR3	Q9UBC9	169 aa		4.19	□□□□□ -1.74
RYR3-223	ENST00000636845	IGHV1-18	A0A0C4DH31	117 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845		M0R1B8	84 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	CEACAM4	O75871	244 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	ZNF80	P51504	273 aa	Predicted RBP	4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	HERVK_113	P61574	105 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845		Q6Q795	121 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845		Q6ZQT7	251 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	C3orf56	Q8N813	242 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	KLHL30-AS1	Q8NEE0	82 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	PLEKHB2	Q96CS7	222 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	PRO1854	Q9UHT4	67 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	NBEA	Q8NFP9	2946 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	CFAP54	Q96N23	3096 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	DSCAML1	Q8TD84	2053 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	TRAV2	A0A0B4J234	112 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	TRAV12-1	A0A0B4J245	112 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	PVRIG	Q6DKI7	326 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	TDH	Q8IZJ6	230 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	LINC00574	Q9H8X3	128 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	VPREB3	Q9UKI3	123 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	PLCE1	Q9P212	2302 aa		4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	TPR	P12270	2363 aa	Known RBP	4.18	□□□□□ -1.74
RYR3-223	ENST00000636845	CD7	P09564	240 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	MSMP	Q1L6U9	139 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	SPANXN1	Q5VSR9	72 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	SBSPON	Q8IVN8	264 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845		Q8N1Y9	231 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	ZNF491	Q8N8L2	437 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	PPDPF	Q9H3Y8	114 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845		S4R3C0	116 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	IGLV2-18	A0A075B6J9	118 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845		M0QXV9	152 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	CNTFR	P26992	372 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	HLA-DMB	P28068	263 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	EMP1	P54849	157 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	ORMDL2	Q53FV1	153 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	IGFL4	Q6B9Z1	124 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	TRPT1	Q86TN4	253 aa	Known RBP	4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	FAM57A	Q8TBR7	257 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	TMEM126A	Q9H061	195 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	TRIOBP	Q9H2D6	2365 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	FRY	Q5TBA9	3013 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845		I3L2K1	104 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	IGHV4-39	P01824	125 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	TRGV3	P03979	118 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	CFC1B	P0CG36	223 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	CFC1	P0CG37	223 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	CXCL12	P48061	93 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	CNFN	Q9BYD5	112 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	RAB1B	Q9H0U4	201 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	CTSZ	Q9UBR2	303 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	SIGLEC9	Q9Y336	463 aa		4.17	□□□□□ -1.74
RYR3-223	ENST00000636845	TEX49	A0A1B0GTD5	131 aa		4.16	□□□□□ -1.74
RYR3-223	ENST00000636845	NTN3	O00634	580 aa	Predicted RBP	4.16	□□□□□ -1.74
RYR3-223	ENST00000636845	IGLV1-44	P01699	117 aa		4.16	□□□□□ -1.74
RYR3-223	ENST00000636845	CCL8	P80075	99 aa		4.16	□□□□□ -1.74
RYR3-223	ENST00000636845	FOXC1	Q12948	553 aa		4.16	□□□□□ -1.74
RYR3-223	ENST00000636845	HES1	Q14469	280 aa		4.16	□□□□□ -1.74
RYR3-223	ENST00000636845	PRR30	Q53SZ7	412 aa	Predicted RBP	4.16	□□□□□ -1.74
RYR3-223	ENST00000636845	TMEM200B	Q69YZ2	307 aa		4.16	□□□□□ -1.74
RYR3-223	ENST00000636845	TIMD4	Q96H15	378 aa		4.16	□□□□□ -1.74
RYR3-223	ENST00000636845	SMIM2	Q9BVW6	85 aa		4.16	□□□□□ -1.74
RYR3-223	ENST00000636845	DSCAM	O60469	2012 aa		4.16	□□□□□ -1.74
RYR3-223	ENST00000636845	ZGRF1	Q86YA3	2104 aa		4.16	□□□□□ -1.74

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