RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 A0A1W2PPV4 95 aa12.44□□□□□ -0.42
PNKP-225ENST00000636214 SPINK4O60575 86 aa12.44□□□□□ -0.42
PNKP-225ENST00000636214 TNP2Q05952 138 aa12.44□□□□□ -0.42
PNKP-225ENST00000636214 PRR9Q5T870 116 aa12.44□□□□□ -0.42
PNKP-225ENST00000636214 ZNF575Q86XF7 245 aa12.44□□□□□ -0.42
PNKP-225ENST00000636214 UPK3BQ9BT76 320 aa12.44□□□□□ -0.42
PNKP-225ENST00000636214 DYNC1H1Q14204 4646 aaKnown RBP12.44□□□□□ -0.42
PNKP-225ENST00000636214 PAX4O43316 350 aa12.43□□□□□ -0.42
PNKP-225ENST00000636214 IGHV3-53P01767 116 aa12.43□□□□□ -0.42
PNKP-225ENST00000636214 SLAQ13239 276 aa12.43□□□□□ -0.42
PNKP-225ENST00000636214 ESRGQ1W209 222 aa12.43□□□□□ -0.42
PNKP-225ENST00000636214 ST6GAL2Q96JF0 529 aa12.43□□□□□ -0.42
PNKP-225ENST00000636214 HYLS1Q96M11 299 aa12.43□□□□□ -0.42
PNKP-225ENST00000636214 MRPL16Q9NX20 251 aaKnown RBP12.43□□□□□ -0.42
PNKP-225ENST00000636214 TP53TG3Q9ULZ0 132 aa12.43□□□□□ -0.42
PNKP-225ENST00000636214 RPH3ALQ9UNE2 315 aa12.43□□□□□ -0.42
PNKP-225ENST00000636214 ICOSQ9Y6W8 199 aa12.43□□□□□ -0.42
PNKP-225ENST00000636214 PKD1P98161 4303 aa12.43□□□□□ -0.42
PNKP-225ENST00000636214 A0A1W2PPQ1 181 aa12.42□□□□□ -0.42
PNKP-225ENST00000636214 C16orf90A8MZG2 172 aa12.42□□□□□ -0.42
PNKP-225ENST00000636214 ZNF266Q14584 549 aa12.42□□□□□ -0.42
PNKP-225ENST00000636214 FAM159AQ6UWV7 190 aa12.42□□□□□ -0.42
PNKP-225ENST00000636214 PQLC2Q6ZP29 291 aa12.42□□□□□ -0.42
PNKP-225ENST00000636214 OTORQ9NRC9 128 aa12.42□□□□□ -0.42
PNKP-225ENST00000636214 LENEPQ9Y5L5 61 aa12.42□□□□□ -0.42
PNKP-225ENST00000636214 A0A096LPF7 62 aa12.41□□□□□ -0.42
PNKP-225ENST00000636214 DIRC3C9JPN6 131 aa12.41□□□□□ -0.42
PNKP-225ENST00000636214 MUC21Q5SSG8 566 aa12.41□□□□□ -0.42
PNKP-225ENST00000636214 VSIG2Q96IQ7 327 aa12.41□□□□□ -0.42
PNKP-225ENST00000636214 TRGV11A0A075B6L2 103 aa12.4□□□□□ -0.42
PNKP-225ENST00000636214 BATF3Q9NR55 127 aa12.4□□□□□ -0.42
PNKP-225ENST00000636214 PRO0255Q9UI72 69 aa12.4□□□□□ -0.42
PNKP-225ENST00000636214 NAGKQ9UJ70 344 aa12.4□□□□□ -0.42
PNKP-225ENST00000636214 TRGV4A0A0C4DH28 118 aa12.39□□□□□ -0.43
PNKP-225ENST00000636214 PGPA6NDG6 321 aa12.39□□□□□ -0.43
PNKP-225ENST00000636214 TMEM183BQ1AE95 376 aa12.39□□□□□ -0.43
PNKP-225ENST00000636214 Q6ZQT7 251 aa12.39□□□□□ -0.43
PNKP-225ENST00000636214 TMEM183AQ8IXX5 376 aa12.39□□□□□ -0.43
PNKP-225ENST00000636214 TMED6Q8WW62 240 aa12.39□□□□□ -0.43
PNKP-225ENST00000636214 KRTAP17-1Q9BYP8 105 aa12.39□□□□□ -0.43
PNKP-225ENST00000636214 PCLOQ9Y6V0 5065 aa12.38□□□□□ -0.43
PNKP-225ENST00000636214 BTF3P20290 206 aaKnown RBP12.38□□□□□ -0.43
PNKP-225ENST00000636214 Q6AWC8 147 aa12.38□□□□□ -0.43
PNKP-225ENST00000636214 GOLT1AQ6ZVE7 132 aa12.38□□□□□ -0.43
PNKP-225ENST00000636214 OR10G4Q8NGN3 311 aa12.38□□□□□ -0.43
PNKP-225ENST00000636214 OR10G9Q8NGN4 311 aa12.38□□□□□ -0.43
PNKP-225ENST00000636214 OR10G7Q8NGN6 311 aa12.38□□□□□ -0.43
PNKP-225ENST00000636214 PCNPQ8WW12 178 aaKnown RBP12.38□□□□□ -0.43
PNKP-225ENST00000636214 C8orf49Q96NF6 230 aa12.38□□□□□ -0.43
PNKP-225ENST00000636214 SPXQ9BT56 116 aa12.38□□□□□ -0.43
PNKP-225ENST00000636214 HHLA3Q9XRX5 114 aa12.38□□□□□ -0.43
PNKP-225ENST00000636214 SIVA1O15304 175 aa12.37□□□□□ -0.43
PNKP-225ENST00000636214 EIF3GO75821 320 aaKnown RBP eCLIP12.37□□□□□ -0.43
PNKP-225ENST00000636214 RAB2AP61019 212 aa12.37□□□□□ -0.43
PNKP-225ENST00000636214 MRPL23Q16540 153 aaKnown RBP12.37□□□□□ -0.43
PNKP-225ENST00000636214 WFDC1Q9HC57 220 aa12.37□□□□□ -0.43
PNKP-225ENST00000636214 ALG5Q9Y673 324 aa12.37□□□□□ -0.43
PNKP-225ENST00000636214 RYR1P21817 5038 aa12.36□□□□□ -0.43
PNKP-225ENST00000636214 CDC34P49427 236 aaPredicted RBP12.36□□□□□ -0.43
PNKP-225ENST00000636214 ARL6IP6Q8N6S5 226 aa12.36□□□□□ -0.43
PNKP-225ENST00000636214 NDFIP1Q9BT67 221 aa12.36□□□□□ -0.43
PNKP-225ENST00000636214 MED28Q9H204 178 aa12.36□□□□□ -0.43
PNKP-225ENST00000636214 TRAV21A0A0B4J279 112 aa12.35□□□□□ -0.43
PNKP-225ENST00000636214 NXPH4O95158 308 aa12.35□□□□□ -0.43
PNKP-225ENST00000636214 CRYBA4P53673 196 aa12.35□□□□□ -0.43
PNKP-225ENST00000636214 HSD17B11Q8NBQ5 300 aa12.35□□□□□ -0.43
PNKP-225ENST00000636214 KRTAP1-5Q9BYS1 174 aa12.35□□□□□ -0.43
PNKP-225ENST00000636214 MDFICQ9P1T7 246 aa12.35□□□□□ -0.43
PNKP-225ENST00000636214 K7EQM0 130 aa12.34□□□□□ -0.43
PNKP-225ENST00000636214 HMGB3O15347 200 aaKnown RBP12.34□□□□□ -0.43
PNKP-225ENST00000636214 PTTG1O95997 202 aa12.34□□□□□ -0.43
PNKP-225ENST00000636214 MBP02144 154 aa12.34□□□□□ -0.43
PNKP-225ENST00000636214 SRIP30626 198 aa12.34□□□□□ -0.43
PNKP-225ENST00000636214 NEGR1Q7Z3B1 354 aa12.34□□□□□ -0.43
PNKP-225ENST00000636214 TREM1Q9NP99 234 aa12.34□□□□□ -0.43
PNKP-225ENST00000636214 SERTM2A0A1B0GWG4 89 aa12.33□□□□□ -0.44
PNKP-225ENST00000636214 SFTA3P0C7M3 94 aa12.33□□□□□ -0.44
PNKP-225ENST00000636214 ARL14EPLP0DKL9 152 aa12.33□□□□□ -0.44
PNKP-225ENST00000636214 FHL2Q14192 279 aa12.33□□□□□ -0.44
PNKP-225ENST00000636214 SPATA12Q7Z6I5 190 aa12.33□□□□□ -0.44
PNKP-225ENST00000636214 RASL10AQ92737 203 aa12.33□□□□□ -0.44
PNKP-225ENST00000636214 SDF2L1Q9HCN8 221 aa12.33□□□□□ -0.44
PNKP-225ENST00000636214 F6UZH7 168 aa12.32□□□□□ -0.44
PNKP-225ENST00000636214 ORM1P02763 201 aa12.32□□□□□ -0.44
PNKP-225ENST00000636214 LINC00315P59091 139 aa12.32□□□□□ -0.44
PNKP-225ENST00000636214 GNG5P63218 68 aa12.32□□□□□ -0.44
PNKP-225ENST00000636214 TDRG1Q3Y452 100 aa12.32□□□□□ -0.44
PNKP-225ENST00000636214 OR4C5Q8NGB2 326 aa12.32□□□□□ -0.44
PNKP-225ENST00000636214 OR2G3Q8NGZ4 309 aa12.32□□□□□ -0.44
PNKP-225ENST00000636214 KCNS1Q96KK3 526 aa12.32□□□□□ -0.44
PNKP-225ENST00000636214 PSMG3Q9BT73 122 aaPredicted RBP12.32□□□□□ -0.44
PNKP-225ENST00000636214 TRAV9-2A0A087WT02 112 aa12.31□□□□□ -0.44
PNKP-225ENST00000636214 TRAV8-1A0A0A6YYK1 113 aa12.31□□□□□ -0.44
PNKP-225ENST00000636214 TRAV4A0A0B4J268 109 aa12.31□□□□□ -0.44
PNKP-225ENST00000636214 M0R2P5 195 aa12.31□□□□□ -0.44
PNKP-225ENST00000636214 EREGO14944 169 aa12.31□□□□□ -0.44
PNKP-225ENST00000636214 C5orf17Q8NAS9 161 aa12.31□□□□□ -0.44
PNKP-225ENST00000636214 ZNF479Q96JC4 524 aa12.31□□□□□ -0.44
PNKP-225ENST00000636214 TXNDC17Q9BRA2 123 aa12.31□□□□□ -0.44
PNKP-225ENST00000636214 C9JCJ5 164 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms