RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 Q6ZVH6 145 aa7.01□□□□□ -1.29
PATJ-216ENST00000635214 SH2D6Q7Z4S9 175 aa7.01□□□□□ -1.29
PATJ-216ENST00000635214 Q8TCH9 128 aa7.01□□□□□ -1.29
PATJ-216ENST00000635214 BUB1B-PAK6H3BSN5 160 aa7.01□□□□□ -1.29
PATJ-216ENST00000635214 VMO1Q7Z5L0 202 aa7.01□□□□□ -1.29
PATJ-216ENST00000635214 Q8NFD4 153 aa7.01□□□□□ -1.29
PATJ-216ENST00000635214 GAFA1Q96PS6 74 aa7.01□□□□□ -1.29
PATJ-216ENST00000635214 ZNF581Q9P0T4 197 aa7.01□□□□□ -1.29
PATJ-216ENST00000635214 DKK2Q9UBU2 259 aa7.01□□□□□ -1.29
PATJ-216ENST00000635214 EP300Q09472 2414 aaPredicted RBP7□□□□□ -1.29
PATJ-216ENST00000635214 TRBV25-1A0A075B6N4 114 aa7□□□□□ -1.29
PATJ-216ENST00000635214 K7EM74 188 aa7□□□□□ -1.29
PATJ-216ENST00000635214 FOXG1P55316 489 aaPredicted RBP7□□□□□ -1.29
PATJ-216ENST00000635214 HIGD1BQ9P298 99 aa7□□□□□ -1.29
PATJ-216ENST00000635214 IGKV1D-17A0A075B6S4 117 aa7□□□□□ -1.29
PATJ-216ENST00000635214 CRLF1O75462 422 aa7□□□□□ -1.29
PATJ-216ENST00000635214 PRB4P10163 310 aaPredicted RBP7□□□□□ -1.29
PATJ-216ENST00000635214 SUMO4Q6EEV6 95 aa7□□□□□ -1.29
PATJ-216ENST00000635214 PROK2Q9HC23 129 aa7□□□□□ -1.29
PATJ-216ENST00000635214 INTS1Q8N201 2190 aaKnown RBP7□□□□□ -1.29
PATJ-216ENST00000635214 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7□□□□□ -1.29
PATJ-216ENST00000635214 KNCNA6PVL3 124 aa7□□□□□ -1.29
PATJ-216ENST00000635214 G3V4G9 280 aa7□□□□□ -1.29
PATJ-216ENST00000635214 IGKV1-16P04430 117 aa7□□□□□ -1.29
PATJ-216ENST00000635214 ABCA7Q8IZY2 2146 aa7□□□□□ -1.29
PATJ-216ENST00000635214 DEFB104AQ8WTQ1 72 aa7□□□□□ -1.29
PATJ-216ENST00000635214 C8orf49Q96NF6 230 aa7□□□□□ -1.29
PATJ-216ENST00000635214 RHPN1-AS1Q9BWJ2 59 aa7□□□□□ -1.29
PATJ-216ENST00000635214 IGFL4Q6B9Z1 124 aa7□□□□□ -1.29
PATJ-216ENST00000635214 KIAA2026Q5HYC2 2103 aa7□□□□□ -1.29
PATJ-216ENST00000635214 PRSS29PA6NIE9 313 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 IGKV1-39P01597 117 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 IGKV1D-39P04432 117 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 LY6DQ14210 128 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 ANXA2RQ3ZCQ2 193 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 ZNF493Q6ZR52 646 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 ATP6V0E2Q8NHE4 81 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 TMEM243Q9BU79 118 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 SCRT2Q9NQ03 307 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 NDPQ00604 133 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 DAZ1Q9NQZ3 744 aaKnown RBP6.99□□□□□ -1.29
PATJ-216ENST00000635214 MED12Q93074 2177 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 TRAV26-1A0A087WT03 109 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 A0A0B4J2C4 111 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 BAALC-AS2P0C853 105 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 HERVK_113P63121 156 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 PRB3Q04118 309 aaPredicted RBP6.99□□□□□ -1.29
PATJ-216ENST00000635214 PCP2Q8IVA1 136 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 IGHV1-69DA0A0B4J2H0 117 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 TAX1BP3O14907 124 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 LINC00205P59089 165 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 PRR20EP86478 221 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 PRR20CP86479 221 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 PRR20DP86480 221 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 PRR20BP86481 221 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 PRR20AP86496 221 aa6.99□□□□□ -1.29
PATJ-216ENST00000635214 LTAP01374 205 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 HOXD3P31249 432 aaPredicted RBP6.98□□□□□ -1.29
PATJ-216ENST00000635214 FOXI1Q12951 378 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 ZNF672Q499Z4 452 aaPredicted RBP6.98□□□□□ -1.29
PATJ-216ENST00000635214 SPRY4Q9C004 299 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 ATP5G1P05496 136 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 DOCK10Q96BY6 2186 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 H3BRN7 92 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 K7EN84 100 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 ATRXP46100 2492 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 CEP192Q8TEP8 1941 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 PRSS47A8MTI9 375 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 EFNA4P52798 201 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 KRTAP27-1Q3LI81 207 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 THAP8Q8NA92 274 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 FXYD5Q96DB9 178 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 ZC2HC1AQ96GY0 325 aa6.98□□□□□ -1.29
PATJ-216ENST00000635214 WIPF3A6NGB9 483 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 RHOHQ15669 191 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 TRAV12-1A0A0B4J245 112 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 FAM236AA0A1B0GUQ0 79 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 FAM236BA0A1B0GV22 79 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 F6UB75 175 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 PFN2P35080 140 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 IGFL2Q6UWQ7 119 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 FAM110DQ8TAY7 271 aaPredicted RBP6.97□□□□□ -1.29
PATJ-216ENST00000635214 LINC00527Q9UJ94 153 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 A0A1B0GX51 115 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 IGLV1-44P01699 117 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 WFDC2Q14508 124 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 CR1LQ2VPA4 569 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 ORMDL1Q9P0S3 153 aa6.97□□□□□ -1.29
PATJ-216ENST00000635214 TINCRA0A1B0GVN0 87 aa6.96□□□□□ -1.29
PATJ-216ENST00000635214 LYNX1G3V0Z9 82 aa6.96□□□□□ -1.29
PATJ-216ENST00000635214 LYNX1P0DP58 116 aa6.96□□□□□ -1.29
PATJ-216ENST00000635214 H0YGX0 51 aa6.96□□□□□ -1.29
PATJ-216ENST00000635214 IGHV3-53P01767 116 aa6.96□□□□□ -1.29
PATJ-216ENST00000635214 LINC01620Q4KN68 170 aa6.96□□□□□ -1.29
PATJ-216ENST00000635214 TTC28Q96AY4 2481 aa6.96□□□□□ -1.3
PATJ-216ENST00000635214 IGHV1OR15-1A0A075B7D0 117 aa6.96□□□□□ -1.3
PATJ-216ENST00000635214 ANKRD39Q53RE8 183 aa6.96□□□□□ -1.3
PATJ-216ENST00000635214 C8orf31Q8N9H6 132 aa6.96□□□□□ -1.3
PATJ-216ENST00000635214 GVINP1Q7Z2Y8 2422 aa6.96□□□□□ -1.3
PATJ-216ENST00000635214 A0A1W2PRX2 142 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms