RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 SGK494Q96LW2 274 aa5.52□□□□□ -1.53
BRCA1-230ENST00000634433 FOXC2Q99958 501 aa5.52□□□□□ -1.53
BRCA1-230ENST00000634433 VPS25Q9BRG1 176 aa5.52□□□□□ -1.53
BRCA1-230ENST00000634433 SLC50A1Q9BRV3 221 aa5.52□□□□□ -1.53
BRCA1-230ENST00000634433 TMEM208Q9BTX3 173 aa5.52□□□□□ -1.53
BRCA1-230ENST00000634433 UFC1Q9Y3C8 167 aa5.52□□□□□ -1.53
BRCA1-230ENST00000634433 BUB3O43684 328 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 AVPP01185 164 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 IGLV2-11P01706 119 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 CT45A10P0DMU9 189 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 PPIFP30405 207 aaKnown RBP5.51□□□□□ -1.53
BRCA1-230ENST00000634433 PDZD11Q5EBL8 140 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 ZNF738Q8NE65 137 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 NUP35Q8NFH5 326 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 HIST1H2BLQ99880 126 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 NIT2Q9NQR4 276 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 HIGD1CA8MV81 97 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 ZNF207O43670 478 aaKnown RBP5.51□□□□□ -1.53
BRCA1-230ENST00000634433 APCSP02743 223 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 PAFAH1B2P68402 229 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 Q0VG73 95 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 MRPL54Q6P161 138 aaKnown RBP5.51□□□□□ -1.53
BRCA1-230ENST00000634433 SMAD5-AS1Q9Y6J3 95 aa5.51□□□□□ -1.53
BRCA1-230ENST00000634433 TRAV8-1A0A0A6YYK1 113 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 IGHV3-35A0A0C4DH35 117 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 NDUFA4O00483 81 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 PRYO14603 147 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 SPINK4O60575 86 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 IGHV4-31P0DP07 118 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 DEFB112Q30KQ8 113 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 OR10J3Q5JRS4 329 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 C9orf139Q6ZV77 190 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 CIARTQ8N365 385 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-230ENST00000634433 TEX29Q8N6K0 151 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 PPDPFQ9H3Y8 114 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 SIGLEC8Q9NYZ4 499 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 LINC00527Q9UJ94 153 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.5□□□□□ -1.532e-7■■■■■ 43.6
BRCA1-230ENST00000634433 A0A1W2PS18 150 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 RBAKDNA6NC62 111 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 SMIM9A6NGZ8 99 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 Q6AWC8 147 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 COX8CQ7Z4L0 72 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 BAGE3Q86Y29 109 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 NDFIP1Q9BT67 221 aa5.5□□□□□ -1.53
BRCA1-230ENST00000634433 CLPSL1A2RUU4 121 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 M0R3E3 92 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 CHEK1O14757 476 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 IGLV1-40P01703 118 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 AMBPP02760 352 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 FOXA3P55318 350 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-230ENST00000634433 BLCAPP62952 87 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 HBBP68871 147 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 SLC35B1P78383 322 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 GAGE1Q13065 139 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 LCN12Q6JVE5 192 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 PRR25Q96S07 402 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 ESDP10768 282 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 RPS20P60866 119 aaKnown RBP5.49□□□□□ -1.53
BRCA1-230ENST00000634433 FAM162BQ5T6X4 162 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 LINC00322Q6ZN03 302 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-230ENST00000634433 C11orf45Q8TAV5 145 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 BORCS7Q96B45 105 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 ZC2HC1AQ96GY0 325 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 NOL4LQ96MY1 436 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-230ENST00000634433 MDFIQ99750 246 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 PDZD2O15018 2839 aa5.49□□□□□ -1.53
BRCA1-230ENST00000634433 A0A1B0GXF2 115 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 FSHBP01225 129 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 GYPEP15421 78 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 KRTAP10-9P60411 292 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 RIGQ13278 110 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 PYY3Q5JQD4 70 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 TCF24Q7RTU0 167 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 OR4X2Q8NGF9 303 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 PGLYRP4Q96LB8 373 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 IGHV3OR16-8A0A075B7F1 116 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 A8MWP6 167 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 IGHV4-59P01825 116 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 ORM1P02763 201 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 CFHR3Q02985 330 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 JOSD1Q15040 202 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-230ENST00000634433 Q6YL49 198 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 Q96MF0 132 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 NPFFR1Q9GZQ6 430 aa5.48□□□□□ -1.53
BRCA1-230ENST00000634433 IGKV2-40A0A087WW87 121 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-230ENST00000634433 GRIFINA4D1Z8 144 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 TMEM189A5PLL7 270 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 HSBP1O75506 76 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 NDUFA7O95182 113 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 IGKV2D-40P01614 121 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-230ENST00000634433 IGHG4P01861 327 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 FRMD6-AS1P0C7T7 363 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 TAL2Q16559 108 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 FAM106AQ4KMX7 169 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 C12orf54Q6X4T0 127 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 TMEM256Q8N2U0 113 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 A0A1B0GUT8 65 aa5.47□□□□□ -1.53
BRCA1-230ENST00000634433 TINCRA0A1B0GVN0 87 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms