RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 DEFB136Q30KP8 78 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 FAM74A3Q4VXF1 159 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 SIGLEC15Q6ZMC9 328 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 NDUFA11Q86Y39 141 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 ARL6IP6Q8N6S5 226 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 CYB561D1Q8N8Q1 229 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 HIST1H2BAQ96A08 127 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 RPUSD4Q96CM3 377 aaKnown RBP4.18□□□□□ -1.74
LINC00254-202ENST00000633813 LINC00052Q96N35 136 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 RHPN1-AS1Q9BWJ2 59 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 Q9H3A6 140 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 OTORQ9NRC9 128 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 CLEC5AQ9NY25 188 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 EPDR1Q9UM22 224 aa4.18□□□□□ -1.74
LINC00254-202ENST00000633813 CARHSP1Q9Y2V2 147 aaKnown RBP4.18□□□□□ -1.74
LINC00254-202ENST00000633813 IGLV7-46A0A075B6I9 117 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 IGHV3OR16-13A0A075B7E8 117 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 IGHV3-49A0A0A0MS15 119 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 IGHV3-74A0A0B4J1X5 117 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 IGHV3-66A0A0C4DH42 116 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 C2orf70A6NJV1 201 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 GGTLC3B5MD39 225 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 H7C423 109 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 UBE2CO00762 179 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 APOC3P02656 99 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 SNRPCP09234 159 aaKnown RBP4.17□□□□□ -1.74
LINC00254-202ENST00000633813 FOLR2P14207 255 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 ADCYAP1P18509 176 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 CEBPGP53567 150 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 KRTAP10-3P60369 221 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 SAMD13Q5VXD3 122 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 SVBPQ8N300 66 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.17□□□□□ -1.74
LINC00254-202ENST00000633813 C5orf17Q8NAS9 161 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 OR9G4Q8NGQ1 327 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 DLX4Q92988 240 aaPredicted RBP4.17□□□□□ -1.74
LINC00254-202ENST00000633813 C11orf52Q96A22 123 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 SLC50A1Q9BRV3 221 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 NIPSNAP3BQ9BS92 247 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 ZNF331Q9NQX6 463 aaPredicted RBP4.17□□□□□ -1.74
LINC00254-202ENST00000633813 F8P00451 2351 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 MTORP42345 2549 aa4.17□□□□□ -1.74
LINC00254-202ENST00000633813 SERTM2A0A1B0GWG4 89 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 ZNF727A8MUV8 499 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 H3BTX0 84 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 SLC17A3O00476 420 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 SLC25A5P05141 298 aaKnown RBP4.16□□□□□ -1.74
LINC00254-202ENST00000633813 S100A9P06702 114 aaKnown RBP4.16□□□□□ -1.74
LINC00254-202ENST00000633813 CSN3P07498 182 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 CSN1S1P47710 185 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 TAS2R60P59551 318 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 ZNF415Q09FC8 603 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 TMEM241Q24JQ0 296 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 PRR27Q6MZM9 219 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 EXOC3-AS1Q8N2X6 119 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 OR10G8Q8NGN5 311 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 CMTM2Q8TAZ6 248 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 CITED1Q99966 193 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 SMIM7Q9BQ49 75 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 ATG101Q9BSB4 218 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 PARLQ9H300 379 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 NRN1Q9NPD7 142 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 SIGLEC8Q9NYZ4 499 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 MLXQ9UH92 298 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 NAT8Q9UHE5 227 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 PRELID1Q9Y255 219 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 KLF12Q9Y4X4 402 aa4.16□□□□□ -1.74
LINC00254-202ENST00000633813 A0A1W2PPQ1 181 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 FBLL1A6NHQ2 334 aaKnown RBP4.15□□□□□ -1.75
LINC00254-202ENST00000633813 B4DEV8 164 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 C9JCJ5 164 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 K7EQM0 130 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 PEX7O00628 323 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 ISLRO14498 428 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 OVOL1O14753 267 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 SNAPINO95295 136 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 TCRAP04437 139 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 RPL35P42766 123 aaKnown RBP4.15□□□□□ -1.75
LINC00254-202ENST00000633813 CNN1P51911 297 aaKnown RBP4.15□□□□□ -1.75
LINC00254-202ENST00000633813 PAFAH1B2P68402 229 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 PSG3Q16557 428 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 ZNF674Q2M3X9 581 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 NSUN5P1Q3KNT7 163 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 LCN12Q6JVE5 192 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 ADAMTSL5Q6ZMM2 481 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 TCF24Q7RTU0 167 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 MRPL53Q96EL3 112 aaKnown RBP4.15□□□□□ -1.75
LINC00254-202ENST00000633813 TVP23CQ96ET8 276 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 DERL1Q9BUN8 251 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 MS4A6AQ9H2W1 248 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 LY96Q9Y6Y9 160 aa4.15□□□□□ -1.75
LINC00254-202ENST00000633813 NSD1Q96L73 2696 aaPredicted RBP4.15□□□□□ -1.75
LINC00254-202ENST00000633813 TRBV20OR9-2A0A075B6H5 130 aa4.14□□□□□ -1.75
LINC00254-202ENST00000633813 TRAV2A0A0B4J234 112 aa4.14□□□□□ -1.75
LINC00254-202ENST00000633813 TRAV8-2A0A0B4J237 113 aa4.14□□□□□ -1.75
LINC00254-202ENST00000633813 TRAV25A0A0B4J276 109 aa4.14□□□□□ -1.75
LINC00254-202ENST00000633813 IGKV3D-20A0A0C4DH25 116 aa4.14□□□□□ -1.75
LINC00254-202ENST00000633813 TRBV6-1A0A0K0K1D8 114 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms