RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 LINC00479Q96M42 142 aa7.18□□□□□ -1.26
SOX2-OT-249ENST00000628810 C20orf144Q9BQM9 153 aa7.18□□□□□ -1.26
SOX2-OT-249ENST00000628810 SMDT1Q9H4I9 107 aa7.18□□□□□ -1.26
SOX2-OT-249ENST00000628810 MED9Q9NWA0 146 aa7.18□□□□□ -1.26
SOX2-OT-249ENST00000628810 PSG8Q9UQ74 426 aa7.18□□□□□ -1.26
SOX2-OT-249ENST00000628810 M0R2Z0 102 aa7.17□□□□□ -1.26
SOX2-OT-249ENST00000628810 INSP01308 110 aa7.17□□□□□ -1.26
SOX2-OT-249ENST00000628810 LTAP01374 205 aa7.17□□□□□ -1.26
SOX2-OT-249ENST00000628810 GFI1BQ5VTD9 330 aa7.17□□□□□ -1.26
SOX2-OT-249ENST00000628810 TVP23CQ96ET8 276 aa7.17□□□□□ -1.26
SOX2-OT-249ENST00000628810 EIF5A2Q9GZV4 153 aaKnown RBP7.17□□□□□ -1.26
SOX2-OT-249ENST00000628810 TRAV34A0A0B4J273 112 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 RAB19A4D1S5 217 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 RPL35P42766 123 aaKnown RBP7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 TAS2R60P59551 318 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 UBE2G1P62253 170 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 SAPCD1Q5SSQ6 148 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 PRR9Q5T870 116 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 ZNF705AQ6ZN79 300 aaPredicted RBP7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 RNF183Q96D59 192 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 SMIM12Q96EX1 92 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 NDFIP1Q9BT67 221 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 DERL1Q9BUN8 251 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 XCL2Q9UBD3 114 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 ZFP30Q9Y2G7 519 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 AGRNO00468 2067 aa7.16□□□□□ -1.26
SOX2-OT-249ENST00000628810 TRAV12-2A0A075B6T6 113 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 C7orf71A4D174 169 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 SRP19P09132 144 aaKnown RBP7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 RBMY1A1P0DJD3 496 aaKnown RBP7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 RBMY1CP0DJD4 496 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 FXYD7P58549 80 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 SRSF3P84103 164 aaKnown RBP7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 KIR3DS1Q14943 382 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 RBMY1FQ15415 496 aaKnown RBP7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 DEFB135Q30KP9 77 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 Q6AWC8 147 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 PRNTQ86SH4 94 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 TMEM183AQ8IXX5 376 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 C1orf158Q8N1D5 194 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 TMEM256Q8N2U0 113 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 SGK494Q96LW2 274 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 RCHY1Q96PM5 261 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 SPATA25Q9BR10 227 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 OVOL2Q9BRP0 275 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 MLST8Q9BVC4 326 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 PARLQ9H300 379 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 TREM1Q9NP99 234 aa7.15□□□□□ -1.26
SOX2-OT-249ENST00000628810 DNAH9Q9NYC9 4486 aa7.15□□□□□ -1.27
SOX2-OT-249ENST00000628810 TRBV20OR9-2A0A075B6H5 130 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 LINC00862A6NCI5 91 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 C9JCJ5 164 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 C9JQL5 133 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 SPRY2O43597 315 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 ZNF324O75467 553 aaPredicted RBP7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 GPX1P07203 203 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 NHLRC4P0CG21 123 aaPredicted RBP7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 BTN1A1Q13410 526 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 PEA15Q15121 130 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 CENPWQ5EE01 88 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 C8orf49Q96NF6 230 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 NEU1Q99519 415 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 ASCL2Q99929 193 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 LINC00467Q9BRT7 94 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 GOLT1BQ9Y3E0 138 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
SOX2-OT-249ENST00000628810 H7BYZ3 331 aa7.13□□□□□ -1.27
SOX2-OT-249ENST00000628810 GCGP01275 180 aa7.13□□□□□ -1.27
SOX2-OT-249ENST00000628810 IGLV2-8P01709 118 aa7.13□□□□□ -1.27
SOX2-OT-249ENST00000628810 PFN1P07737 140 aaKnown RBP7.13□□□□□ -1.27
SOX2-OT-249ENST00000628810 RNASE4P34096 147 aaKnown RBP7.13□□□□□ -1.27
SOX2-OT-249ENST00000628810 SMUG1Q53HV7 270 aa7.13□□□□□ -1.27
SOX2-OT-249ENST00000628810 UQCC3Q6UW78 93 aa7.13□□□□□ -1.27
SOX2-OT-249ENST00000628810 EIF4E3Q8N5X7 224 aaKnown RBP7.13□□□□□ -1.27
SOX2-OT-249ENST00000628810 ZC2HC1AQ96GY0 325 aa7.13□□□□□ -1.27
SOX2-OT-249ENST00000628810 X6R8D5 127 aa7.13□□□□□ -1.27
SOX2-OT-249ENST00000628810 TRAV12-3A0A0B4J271 114 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 TRAV21A0A0B4J279 112 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 SMIM9A6NGZ8 99 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 GNG4P50150 75 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 ZNF80P51504 273 aaPredicted RBP7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 ZNF674Q2M3X9 581 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 TDRG1Q3Y452 100 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 BAGE2Q86Y30 109 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 PYGO2Q9BRQ0 406 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 NIPSNAP3BQ9BS92 247 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 ZMAT4Q9H898 229 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 RETNQ9HD89 108 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 LY96Q9Y6Y9 160 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 HUWE1Q7Z6Z7 4374 aaKnown RBP7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 TENM3Q9P273 2699 aa7.12□□□□□ -1.27
SOX2-OT-249ENST00000628810 J3KRW8 73 aa7.11□□□□□ -1.27
SOX2-OT-249ENST00000628810 MIFP14174 115 aa7.11□□□□□ -1.27
SOX2-OT-249ENST00000628810 CRIP1P50238 77 aa7.11□□□□□ -1.27
SOX2-OT-249ENST00000628810 FAM74A3Q4VXF1 159 aa7.11□□□□□ -1.27
SOX2-OT-249ENST00000628810 Q6ZQT7 251 aa7.11□□□□□ -1.27
SOX2-OT-249ENST00000628810 Q8NAQ8 132 aa7.11□□□□□ -1.27
SOX2-OT-249ENST00000628810 NHLRC2Q8NBF2 726 aa7.11□□□□□ -1.27
SOX2-OT-249ENST00000628810 OR11H2Q8NH07 326 aa7.11□□□□□ -1.27
SOX2-OT-249ENST00000628810 SMIM7Q9BQ49 75 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms