RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 F2Z2F3 143 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 KRTAP24-1Q3LI83 254 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 DEFB121Q5J5C9 76 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 GTSCR1Q86UQ5 136 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 M0R2Z0 102 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 S100A4P26447 101 aaKnown RBP9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 PSMB8P28062 276 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 SSTP61278 116 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 COTL1Q14019 142 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 OR10J3Q5JRS4 329 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 OR10J6PQ8NGY7 276 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 GRIFINA4D1Z8 144 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 ZNF688P0C7X2 276 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 PPIFP30405 207 aaKnown RBP9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 KIAA1644Q3SXP7 199 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 EXOC3-AS1Q8N2X6 119 aa9.58□□□□□ -0.88
SYNGAP1-207ENST00000628646 IGKV1-17P01599 117 aa9.57□□□□□ -0.88
SYNGAP1-207ENST00000628646 NEU1Q99519 415 aa9.57□□□□□ -0.88
SYNGAP1-207ENST00000628646 CBY1Q9Y3M2 126 aa9.57□□□□□ -0.88
SYNGAP1-207ENST00000628646 NSD1Q96L73 2696 aaPredicted RBP9.57□□□□□ -0.88
SYNGAP1-207ENST00000628646 TMEM136Q6ZRR5 245 aa9.57□□□□□ -0.88
SYNGAP1-207ENST00000628646 MCRIP2Q9BUT9 160 aaKnown RBP9.57□□□□□ -0.88
SYNGAP1-207ENST00000628646 MRPL27Q9P0M9 148 aaKnown RBP9.57□□□□□ -0.88
SYNGAP1-207ENST00000628646 NAGKQ9UJ70 344 aa9.57□□□□□ -0.88
SYNGAP1-207ENST00000628646 A8MWP6 167 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 GFRA4Q9GZZ7 299 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 HIST1H1AQ02539 215 aaPredicted RBP9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 C1orf194Q5T5A4 169 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 CCDC140Q96MF4 163 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 GP9P14770 177 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 PSG3Q16557 428 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 ZNF705AQ6ZN79 300 aaPredicted RBP9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 TMEM75Q8N9X5 138 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 OR9G4Q8NGQ1 327 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 DLX4Q92988 240 aaPredicted RBP9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 ASCL2Q99929 193 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 PRO1933Q9H354 126 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 IGHV3OR16-12A0A075B7B8 117 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 PSMG4Q5JS54 123 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 Q86TA4 180 aa9.56□□□□□ -0.88
SYNGAP1-207ENST00000628646 TMSB15BA0A087X1C1 80 aa9.55□□□□□ -0.88
SYNGAP1-207ENST00000628646 FABP5P3A8MUU1 101 aa9.55□□□□□ -0.88
SYNGAP1-207ENST00000628646 DDTP30046 118 aa9.55□□□□□ -0.88
SYNGAP1-207ENST00000628646 ATP6V0BQ99437 205 aa9.55□□□□□ -0.88
SYNGAP1-207ENST00000628646 KLF12Q9Y4X4 402 aa9.55□□□□□ -0.88
SYNGAP1-207ENST00000628646 Q0VG73 95 aa9.55□□□□□ -0.88
SYNGAP1-207ENST00000628646 C16orf95Q9H693 158 aa9.55□□□□□ -0.88
SYNGAP1-207ENST00000628646 IGLV1-40P01703 118 aa9.55□□□□□ -0.88
SYNGAP1-207ENST00000628646 Q6ZWC4 215 aa9.55□□□□□ -0.88
SYNGAP1-207ENST00000628646 MLST8Q9BVC4 326 aa9.55□□□□□ -0.88
SYNGAP1-207ENST00000628646 HSPB8Q9UJY1 196 aa9.55□□□□□ -0.88
SYNGAP1-207ENST00000628646 PROK1P58294 105 aa9.54□□□□□ -0.88
SYNGAP1-207ENST00000628646 CA1P00915 261 aaPredicted RBP9.54□□□□□ -0.88
SYNGAP1-207ENST00000628646 GDF5OSQ5U4N7 250 aa9.54□□□□□ -0.88
SYNGAP1-207ENST00000628646 IGFL4Q6B9Z1 124 aa9.54□□□□□ -0.88
SYNGAP1-207ENST00000628646 UNQ9165/PRO28630Q6UXU0 137 aa9.54□□□□□ -0.88
SYNGAP1-207ENST00000628646 NUP35Q8NFH5 326 aa9.54□□□□□ -0.88
SYNGAP1-207ENST00000628646 GLMPQ8WWB7 406 aa9.54□□□□□ -0.88
SYNGAP1-207ENST00000628646 NIPBLQ6KC79 2804 aaeCLIP9.54□□□□□ -0.88
SYNGAP1-207ENST00000628646 IGHV7-4-1A0A0J9YVY3 117 aa9.54□□□□□ -0.88
SYNGAP1-207ENST00000628646 DIRC3C9JPN6 131 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 LCN12Q6JVE5 192 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 WFDC12Q8WWY7 111 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 SERF1AO75920 110 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 PMCHL1Q16048 86 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 LINC00322Q6ZN03 302 aaPredicted RBP9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 Q8N976 141 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 TMEM191AQ9H0A3 160 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 SMPXQ9UHP9 88 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 CELSR1Q9NYQ6 3014 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 WI2-2373I1.2A0A1W2PRP0 233 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 C9orf66Q5T8R8 295 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 REC114Q7Z4M0 266 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 RAX2Q96IS3 184 aa9.53□□□□□ -0.88
SYNGAP1-207ENST00000628646 STHQ8IWL8 128 aa9.52□□□□□ -0.88
SYNGAP1-207ENST00000628646 TWIST1Q15672 202 aa9.52□□□□□ -0.89
SYNGAP1-207ENST00000628646 GPHB5Q86YW7 130 aa9.52□□□□□ -0.89
SYNGAP1-207ENST00000628646 ZNF414Q96IQ9 312 aa9.52□□□□□ -0.89
SYNGAP1-207ENST00000628646 KCNS1Q96KK3 526 aa9.52□□□□□ -0.89
SYNGAP1-207ENST00000628646 MAP1LC3CQ9BXW4 147 aa9.52□□□□□ -0.89
SYNGAP1-207ENST00000628646 C2orf70A6NJV1 201 aa9.52□□□□□ -0.89
SYNGAP1-207ENST00000628646 OR11H12B2RN74 326 aa9.52□□□□□ -0.89
SYNGAP1-207ENST00000628646 OR5AL1P0C617 328 aa9.52□□□□□ -0.89
SYNGAP1-207ENST00000628646 RNF151Q2KHN1 245 aa9.52□□□□□ -0.89
SYNGAP1-207ENST00000628646 WIPF2Q8TF74 440 aaPredicted RBP9.52□□□□□ -0.89
SYNGAP1-207ENST00000628646 NRN1Q9NPD7 142 aa9.52□□□□□ -0.89
SYNGAP1-207ENST00000628646 MGAM2Q2M2H8 2515 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 CSN3P07498 182 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 DEFB131AP59861 70 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 RCHY1Q96PM5 261 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 KIR2DL5BA0A0G2JN68 375 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 KIR2DL5BA0A0G2JPC4 375 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 LTAP01374 205 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 SMIM17P0DL12 118 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 KIR2DL5AQ8N109 375 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 TRAV8-1A0A0A6YYK1 113 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 IGLV2-11P01706 119 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 FER1L6-AS1Q8NA97 138 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 TRBV6-1A0A0K0K1D8 114 aa9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 M0R3E3 92 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms