RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 IGHV1-45A0A0A0MS14 117 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 IGHV1-69DA0A0B4J2H0 117 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 A0A0U1RQV1 116 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 TMEM223A0PJW6 202 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 PRSS38A1L453 326 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 PLAC8L1A1L4L8 177 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 RBMY1BA6NDE4 496 aaKnown RBP1.47□□□□□ -2.17
TCF4-264ENST00000628391 RBMY1EA6NEQ0 496 aaKnown RBP1.47□□□□□ -2.17
TCF4-264ENST00000628391 LILRA5A6NI73 299 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 IQCF6A8MYZ5 107 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 C12orf77C9JDV5 145 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 USP17L23D6RBM5 183 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 SMKR1H3BMG3 65 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 BCE1O60756 84 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 SS18L1O75177 396 aaPredicted RBP1.47□□□□□ -2.17
TCF4-264ENST00000628391 DKK1O94907 266 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 IGLV2-11P01706 119 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 IGHG2P01859 326 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 RBMY1DP0C7P1 496 aaKnown RBP1.47□□□□□ -2.17
TCF4-264ENST00000628391 RBMY1A1P0DJD3 496 aaKnown RBP1.47□□□□□ -2.17
TCF4-264ENST00000628391 RBMY1CP0DJD4 496 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 RNASE2P10153 161 aaKnown RBP1.47□□□□□ -2.17
TCF4-264ENST00000628391 ZNF32P17041 273 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 LGALS3P17931 250 aaKnown RBP1.47□□□□□ -2.17
TCF4-264ENST00000628391 CD40P25942 277 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 SUB1P53999 127 aaKnown RBP eCLIP1.47□□□□□ -2.17
TCF4-264ENST00000628391 ERCC8Q13216 396 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 FHL2Q14192 279 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 RBMY1FQ15415 496 aaKnown RBP1.47□□□□□ -2.17
TCF4-264ENST00000628391 ORMDL2Q53FV1 153 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 C4orf48Q5BLP8 95 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 LYZL1Q6UWQ5 148 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 PATE2Q6UY27 113 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 C9orf139Q6ZV77 190 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 FP248Q71RG6 208 aaPredicted RBP1.47□□□□□ -2.17
TCF4-264ENST00000628391 LINC00305Q7Z4B0 112 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 COX8CQ7Z4L0 72 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 PRNTQ86SH4 94 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 STHQ8IWL8 128 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 LYPD1Q8N2G4 141 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 FAM216BQ8N7L0 139 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 LINC00482Q8N8I6 264 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 ZNF784Q8NCA9 323 aaPredicted RBP1.47□□□□□ -2.17
TCF4-264ENST00000628391 NFAM1Q8NET5 270 aaPredicted RBP1.47□□□□□ -2.17
TCF4-264ENST00000628391 IL17DQ8TAD2 202 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 DCANP1Q8TF63 244 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 RNASE6Q93091 150 aaKnown RBP1.47□□□□□ -2.17
TCF4-264ENST00000628391 TOMM6Q96B49 74 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 RNF185Q96GF1 192 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 HS3ST6Q96QI5 342 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 TIMM21Q9BVV7 248 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 SMIM2Q9BVW6 85 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 PROK2Q9HC23 129 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 FSCN3Q9NQT6 498 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 TMEM14CQ9P0S9 112 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 RNF7Q9UBF6 113 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 SHANK1Q9Y566 2161 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 C2orf16Q68DN1 1984 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 TANC2Q9HCD6 1990 aa1.47□□□□□ -2.17
TCF4-264ENST00000628391 IGLV4-69A0A075B6H9 119 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 TRBV19A0A075B6N1 114 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 IGKV1D-37A0A075B6S9 117 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 TRAV3A0A0B4J244 114 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 A0A1W2PNR3 127 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 A0A1W2PQU0 124 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 CGB1A6NKQ9 187 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 TEX22C9J3V5 150 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 H7BZZ5 65 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 M0R3E3 92 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 CCL21O00585 134 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 NDUFC1O43677 76 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 EFNA2O43921 213 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 EIF4EBP3O60516 100 aaPredicted RBP1.46□□□□□ -2.18
TCF4-264ENST00000628391 TIMM17BO60830 172 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 SH2D1AO60880 128 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 DNAL4O96015 105 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 PF4P02776 101 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 VEGFBP49765 207 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 PRSS12P56730 875 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 SNRPD3P62318 126 aaKnown RBP1.46□□□□□ -2.18
TCF4-264ENST00000628391 FKBP1BP68106 108 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 ADORA2A-AS1P86434 159 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 KLKP1Q107X0 134 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 FOXF2Q12947 444 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 PCOLCEQ15113 449 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 DEFB110Q30KQ9 67 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 LY6G5CQ5SRR4 150 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 S100A7L2Q5SY68 101 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 FAM53AQ6NSI3 398 aaPredicted RBP1.46□□□□□ -2.18
TCF4-264ENST00000628391 MRPL14Q6P1L8 145 aaKnown RBP1.46□□□□□ -2.18
TCF4-264ENST00000628391 IGFL2Q6UWQ7 119 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 GFRALQ6UXV0 394 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 Q6ZS46 218 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 DAZ4Q86SG3 579 aaKnown RBP1.46□□□□□ -2.18
TCF4-264ENST00000628391 DYNAPQ8N1N2 210 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 ZCCHC24Q8N2G6 241 aaKnown RBP1.46□□□□□ -2.18
TCF4-264ENST00000628391 RNF182Q8N6D2 247 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 NUP37Q8NFH4 326 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 C17orf77Q96MU5 243 aa1.46□□□□□ -2.18
TCF4-264ENST00000628391 SCGB3A1Q96QR1 104 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms