RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 CUBNO60494 3623 aa5.65□□□□□ -1.51
PTP4A1-206ENST00000627002 NSD1Q96L73 2696 aaPredicted RBP5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 TGIF2-C20orf24A0A0A6YYL0 155 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 A0A0J9YX75 114 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 A0A1W2PPQ1 181 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 SMIM27A0A1W2PRY6 76 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 XKRY2A2RUG3 117 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 FAM231BA6NCW3 169 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 FABP5P3A8MUU1 101 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 SH2D1AO60880 128 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 CD33P20138 364 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 FAM3BP58499 235 aaPredicted RBP5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 RPS20P60866 119 aaKnown RBP5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 LINC00322Q6ZN03 302 aaPredicted RBP5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 LINC00482Q8N8I6 264 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 OR2D3Q8NGH3 330 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 TSKUQ8WUA8 353 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 FAM19A4Q96LR4 140 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 ODF3Q96PU9 254 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 GPR61Q9BZJ8 451 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 GFRA4Q9GZZ7 299 aa5.64□□□□□ -1.51
PTP4A1-206ENST00000627002 TMEM189A5PLL7 270 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 F6UB75 175 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 IGLV1-51P01701 117 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 TYMSP04818 313 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 CXCL1P09341 107 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 ZNF705DP0CH99 300 aaPredicted RBP5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 ZNF705BP0CI00 300 aaPredicted RBP5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 CRISP2P16562 243 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 LEPP41159 167 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 CRIP1P50238 77 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 INSL3P51460 131 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 TNP2Q05952 138 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 KRTAP24-1Q3LI83 254 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 COX19Q49B96 90 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 Q6AWC8 147 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 SAV1Q9H4B6 383 aaPredicted RBP5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 NAT8BQ9UHF3 227 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 COL6A5A8TX70 2615 aa5.63□□□□□ -1.51
PTP4A1-206ENST00000627002 TRAV21A0A0B4J279 112 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 IZUMO1RA6ND01 250 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 C1orf196B1AJZ1 125 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 CA1P00915 261 aaPredicted RBP5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 HLA-DRB4P13762 266 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 TSPOP30536 169 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 RPS10P46783 165 aaKnown RBP5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 ZNF80P51504 273 aaPredicted RBP5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 DEFB131AP59861 70 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 APRG1Q8IVJ8 170 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 ZFAND2AQ8N6M9 145 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 NEU1Q99519 415 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 ZNF747Q9BV97 191 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 SRD5A3Q9H8P0 318 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 MAP6D1Q9H9H5 199 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 ZNF256Q9Y2P7 627 aaPredicted RBP5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 HLA-DRB4X5D2U9 266 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 STAB1Q9NY15 2570 aa5.62□□□□□ -1.51
PTP4A1-206ENST00000627002 A8MTW9 85 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 HIGD1CA8MV81 97 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 OR11H12B2RN74 326 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 ORM1P02763 201 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 GPX1P07203 203 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 FBN1P35555 2871 aaKnown RBP5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 FOXA3P55318 350 aaPredicted RBP5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 TCL1AP56279 114 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 DEFB1P60022 68 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 C9orf66Q5T8R8 295 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 WDR73Q6P4I2 378 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 RASL11AQ6T310 242 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 ATP5L2Q7Z4Y8 100 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 NUP35Q8NFH5 326 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 CLUHP3Q96NS8 147 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 FAM110AQ9BQ89 295 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 MCRIP2Q9BUT9 160 aaKnown RBP5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 TMA7Q9Y2S6 64 aaKnown RBP5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 ATRQ13535 2644 aa5.61□□□□□ -1.51
PTP4A1-206ENST00000627002 KLLNB2CW77 178 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 H3BMM0 161 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 RNASE4P34096 147 aaKnown RBP5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 CDKN1BP46527 198 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 RAB5BP61020 215 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 BEAN1Q3B7T3 259 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 ACTL10Q5JWF8 245 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 SAMD5Q5TGI4 173 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 GDF5OSQ5U4N7 250 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 SHISA2Q6UWI4 295 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 C12orf54Q6X4T0 127 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 C3orf56Q8N813 242 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 GTSF1Q8WW33 167 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 BORCS7Q96B45 105 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 PGLYRP4Q96LB8 373 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 GNB1LQ9BYB4 327 aa5.6□□□□□ -1.51
PTP4A1-206ENST00000627002 A0A1B0GW15 77 aa5.59□□□□□ -1.51
PTP4A1-206ENST00000627002 C7orf71A4D174 169 aa5.59□□□□□ -1.51
PTP4A1-206ENST00000627002 KNCNA6PVL3 124 aa5.59□□□□□ -1.51
PTP4A1-206ENST00000627002 AMBPP02760 352 aa5.59□□□□□ -1.51
PTP4A1-206ENST00000627002 MT-ND6P03923 174 aa5.59□□□□□ -1.51
PTP4A1-206ENST00000627002 S100A8P05109 93 aa5.59□□□□□ -1.51
PTP4A1-206ENST00000627002 GZMBP10144 247 aa5.59□□□□□ -1.51
PTP4A1-206ENST00000627002 RIGQ13278 110 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms