RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 BRK1Q8WUW1 75 aa0.35□□□□□ -2.35
SCARNA4-202ENST00000625402 NAT14Q8WUY8 206 aa0.35□□□□□ -2.35
SCARNA4-202ENST00000625402 LINC00208Q96KT6 92 aa0.35□□□□□ -2.35
SCARNA4-202ENST00000625402 DSPPQ9NZW4 1301 aa0.35□□□□□ -2.35
SCARNA4-202ENST00000625402 FRAS1Q86XX4 4008 aa0.34□□□□□ -2.35
SCARNA4-202ENST00000625402 A0A1W2PPB8 328 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 A0A1W2PRS3 328 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 KIR3DP1A8MWS1 328 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 H0YJX3 145 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 CDC42EP2O14613 210 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 PFDN1O60925 122 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 FAM107AO95990 144 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 HBDP02042 147 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 PRH1P02810 166 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 SLC25A5P05141 298 aaKnown RBP0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 NBEAP1P0C6P0 100 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 KRTAP2-3P0C7H8 128 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 CCL4P13236 92 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 S100GP29377 79 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 SPINT3P49223 89 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 Q5XG85 94 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 FGD6Q6ZV73 1430 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 SMIM15Q7Z3B0 74 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 C10orf111Q8N326 155 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 TCTEX1D1Q8N7M0 179 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 TMEM35BQ8NCS4 154 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 KRTAP2-4Q9BYR9 128 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 KRTAP2-1Q9BYU5 128 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 MYH1P12882 1939 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 XIRP1Q702N8 1843 aaKnown RBP0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 BDP1A6H8Y1 2624 aa0.34□□□□□ -2.36
SCARNA4-202ENST00000625402 NBDYA0A0U1RRE5 68 aa0.33□□□□□ -2.36
SCARNA4-202ENST00000625402 LOC107986453A0A1B0GWG9 222 aa0.33□□□□□ -2.36
SCARNA4-202ENST00000625402 SULT1C4O75897 302 aa0.33□□□□□ -2.36
SCARNA4-202ENST00000625402 IGKCP01834 107 aa0.33□□□□□ -2.36
SCARNA4-202ENST00000625402 GYPBP06028 91 aa0.33□□□□□ -2.36
SCARNA4-202ENST00000625402 GTF2A1P52655 376 aaPredicted RBP0.33□□□□□ -2.36
SCARNA4-202ENST00000625402 SNRPD3P62318 126 aaKnown RBP0.33□□□□□ -2.36
SCARNA4-202ENST00000625402 RPS28P62857 69 aaKnown RBP0.33□□□□□ -2.36
SCARNA4-202ENST00000625402 MRPL40Q9NQ50 206 aaKnown RBP0.33□□□□□ -2.36
SCARNA4-202ENST00000625402 MRPL36Q9P0J6 103 aaKnown RBP0.33□□□□□ -2.36
SCARNA4-202ENST00000625402 A2MP01023 1474 aa0.33□□□□□ -2.36
SCARNA4-202ENST00000625402 USP54Q70EL1 1684 aa0.33□□□□□ -2.36
SCARNA4-202ENST00000625402 ESPL1Q14674 2120 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 ZCCHC11Q5TAX3 1644 aaKnown RBP0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 KIAA1549LQ6ZVL6 1849 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 MED13LQ71F56 2210 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 MEGF8Q7Z7M0 2845 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 LOC101927531A0A1B0GV80 90 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 TMEM189A5PLL7 270 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 ARL5CA6NH57 179 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 BBIP1A8MTZ0 92 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 LY6G6CO95867 125 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 TCRAP04437 139 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 SDC4P31431 198 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 SRP9P49458 86 aaKnown RBP0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 ZNF137PP52743 207 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 DNAJB13P59910 316 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 GLYATL3Q5SZD4 288 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 C6orf52Q5T4I8 152 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 XAF1Q6GPH4 301 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 LYPD5Q6UWN5 251 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 OR5A2Q8NGI9 324 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 FAM103A1Q9BTL3 118 aaKnown RBP0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 TNCP24821 2201 aa0.32□□□□□ -2.36
SCARNA4-202ENST00000625402 NAV2Q8IVL1 2488 aa0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 ATG2AQ2TAZ0 1938 aa0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 A0A1B0GW64 132 aa0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 EDF1O60869 148 aaKnown RBP0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 MT-ND4LP03901 98 aa0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 CAV3P56539 151 aa0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 FXYD3Q14802 87 aa0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 CCSMST1Q4G0I0 132 aa0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 DEFB132Q7Z7B7 95 aa0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 C5orf56Q8N8D9 126 aa0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 OTOSQ8NHW6 89 aa0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 C19orf12Q9NSK7 152 aa0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 GINS2Q9Y248 185 aa0.31□□□□□ -2.36
SCARNA4-202ENST00000625402 HELZP42694 1942 aaKnown RBP0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 LOC285556D6RIA3 1793 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 GNG14A0A1W2PPG7 69 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 TMEM30CPA0ZSE6 113 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 IFITM5A6NNB3 132 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 UQCRQO14949 82 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 IGF2P01344 180 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 IL7P13232 177 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 CKS2P33552 79 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 RHOHQ15669 191 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 ZNF56Q15929 161 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 ASB16-AS1Q495Z4 193 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 TMEM244Q5VVB8 128 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 Q6ZS92 163 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 C3orf62Q6ZUJ4 267 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 AP1S3Q96PC3 154 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 SMR3AQ99954 134 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 MED23Q9ULK4 1368 aa0.3□□□□□ -2.36
SCARNA4-202ENST00000625402 TRAV36DV7A0A075B6V5 113 aa0.29□□□□□ -2.36
SCARNA4-202ENST00000625402 IGHV1-24A0A0C4DH33 117 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms