RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 IL4P05112 153 aa13.67□□□□□ -0.22
PCF11-207ENST00000624931 APELAP0DMC3 54 aa13.67□□□□□ -0.22
PCF11-207ENST00000624931 GATA3P23771 443 aa13.67□□□□□ -0.22
PCF11-207ENST00000624931 MFAP4P55083 255 aa13.67□□□□□ -0.22
PCF11-207ENST00000624931 LYZL1Q6UWQ5 148 aa13.67□□□□□ -0.22
PCF11-207ENST00000624931 Q8N6K4 173 aa13.67□□□□□ -0.22
PCF11-207ENST00000624931 TRAV8-6A0A0B4J262 113 aa13.67□□□□□ -0.22
PCF11-207ENST00000624931 TMEM11P17152 192 aa13.67□□□□□ -0.22
PCF11-207ENST00000624931 RPL7P18124 248 aaKnown RBP13.67□□□□□ -0.22
PCF11-207ENST00000624931 FCGR2BP31994 310 aaPredicted RBP13.67□□□□□ -0.22
PCF11-207ENST00000624931 NPBQ8NG41 125 aa13.67□□□□□ -0.22
PCF11-207ENST00000624931 OR8A1Q8NGG7 326 aa13.67□□□□□ -0.22
PCF11-207ENST00000624931 A0A096LNJ9 63 aa13.66□□□□□ -0.22
PCF11-207ENST00000624931 GNG7O60262 68 aa13.66□□□□□ -0.22
PCF11-207ENST00000624931 C17orf77Q96MU5 243 aa13.66□□□□□ -0.22
PCF11-207ENST00000624931 FOXC2Q99958 501 aa13.66□□□□□ -0.22
PCF11-207ENST00000624931 TIMM8BQ9Y5J9 83 aaPredicted RBP13.66□□□□□ -0.22
PCF11-207ENST00000624931 CELSR1Q9NYQ6 3014 aa13.66□□□□□ -0.22
PCF11-207ENST00000624931 LINC01546A6NGU7 62 aa13.65□□□□□ -0.22
PCF11-207ENST00000624931 NPIPB5A8MRT5 1133 aa13.65□□□□□ -0.22
PCF11-207ENST00000624931 SH2D1AO60880 128 aa13.65□□□□□ -0.22
PCF11-207ENST00000624931 NDUFA3O95167 84 aa13.65□□□□□ -0.22
PCF11-207ENST00000624931 NCR2O95944 276 aa13.65□□□□□ -0.22
PCF11-207ENST00000624931 EBI3Q14213 229 aa13.65□□□□□ -0.22
PCF11-207ENST00000624931 IFI27L1Q96BM0 104 aa13.65□□□□□ -0.22
PCF11-207ENST00000624931 MCRIP2Q9BUT9 160 aaKnown RBP13.65□□□□□ -0.22
PCF11-207ENST00000624931 TPPP3Q9BW30 176 aa13.65□□□□□ -0.22
PCF11-207ENST00000624931 TP73-AS1Q9UF72 201 aa13.65□□□□□ -0.22
PCF11-207ENST00000624931 RABAC1Q9UI14 185 aa13.65□□□□□ -0.22
PCF11-207ENST00000624931 NAV3Q8IVL0 2385 aa13.65□□□□□ -0.22
PCF11-207ENST00000624931 ABCA1O95477 2261 aa13.65□□□□□ -0.22
PCF11-207ENST00000624931 NCBP2LA6PVI3 153 aaKnown RBP13.64□□□□□ -0.23
PCF11-207ENST00000624931 MRPL51Q4U2R6 128 aaKnown RBP13.64□□□□□ -0.23
PCF11-207ENST00000624931 UFSP1Q6NVU6 142 aa13.64□□□□□ -0.23
PCF11-207ENST00000624931 BCL6BQ8N143 479 aaPredicted RBP13.64□□□□□ -0.23
PCF11-207ENST00000624931 J3QLI3 93 aa13.64□□□□□ -0.23
PCF11-207ENST00000624931 CKS2P33552 79 aa13.64□□□□□ -0.23
PCF11-207ENST00000624931 C5orf64Q2M2E5 130 aa13.64□□□□□ -0.23
PCF11-207ENST00000624931 TMEM219Q86XT9 240 aa13.64□□□□□ -0.23
PCF11-207ENST00000624931 OR5A1Q8NGJ0 315 aa13.64□□□□□ -0.23
PCF11-207ENST00000624931 THYN1Q9P016 225 aa13.64□□□□□ -0.23
PCF11-207ENST00000624931 AMN1Q8IY45 258 aa13.63□□□□□ -0.23
PCF11-207ENST00000624931 FER1L6-AS1Q8NA97 138 aa13.63□□□□□ -0.23
PCF11-207ENST00000624931 C8orf49Q96NF6 230 aa13.63□□□□□ -0.23
PCF11-207ENST00000624931 CSPG4Q6UVK1 2322 aa13.63□□□□□ -0.23
PCF11-207ENST00000624931 FLNAP21333 2647 aaKnown RBP13.62□□□□□ -0.23
PCF11-207ENST00000624931 LOC389332A0A1B0GUA5 103 aa13.62□□□□□ -0.23
PCF11-207ENST00000624931 FAM106CPP0CH98 169 aa13.62□□□□□ -0.23
PCF11-207ENST00000624931 PRR25Q96S07 402 aa13.62□□□□□ -0.23
PCF11-207ENST00000624931 MAP1LC3AQ9H492 121 aa13.62□□□□□ -0.23
PCF11-207ENST00000624931 K7EP34 96 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 CACNG7P62955 275 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 NDPQ00604 133 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 Q8N9W7 124 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 HIGD1BQ9P298 99 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 SMPXQ9UHP9 88 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 IGLV11-55A0A075B6I3 123 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 TMEM213A2RRL7 107 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 FSHBP01225 129 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 IGLC6P0CF74 106 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 LY6EQ16553 131 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 ADAMTSL5Q6ZMM2 481 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 IL17RELQ6ZVW7 336 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 ERASQ7Z444 233 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 TTC9CQ8N5M4 171 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 CNFNQ9BYD5 112 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 MEGF9Q9H1U4 602 aa13.61□□□□□ -0.23
PCF11-207ENST00000624931 NXT2Q9NPJ8 142 aaKnown RBP13.61□□□□□ -0.23
PCF11-207ENST00000624931 M0R3E3 92 aa13.6□□□□□ -0.23
PCF11-207ENST00000624931 RAB9AP51151 201 aa13.6□□□□□ -0.23
PCF11-207ENST00000624931 H3BUX3 64 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 KRTAP1-1Q07627 177 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 KIR3DS1Q14943 382 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 TWIST1Q15672 202 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 DEFB112Q30KQ8 113 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 FAM106AQ4KMX7 169 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 ZNF562Q6V9R5 426 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 OR2K2Q8NGT1 345 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 A0A0G2JLM5 398 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 HLA-DRB4P13762 266 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 Q71RC1 249 aaPredicted RBP13.59□□□□□ -0.23
PCF11-207ENST00000624931 CSTL1Q9H114 145 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 C21orf62Q9NYP8 219 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 HLA-DRB4X5D2U9 266 aa13.59□□□□□ -0.23
PCF11-207ENST00000624931 ZNF469Q96JG9 3925 aaPredicted RBP13.58□□□□□ -0.23
PCF11-207ENST00000624931 FCER1GP30273 86 aa13.58□□□□□ -0.24
PCF11-207ENST00000624931 AKAP9Q99996 3911 aa13.58□□□□□ -0.24
PCF11-207ENST00000624931 RBAKDNA6NC62 111 aa13.57□□□□□ -0.24
PCF11-207ENST00000624931 FABP5P3A8MUU1 101 aa13.57□□□□□ -0.24
PCF11-207ENST00000624931 SNAI2O43623 268 aa13.57□□□□□ -0.24
PCF11-207ENST00000624931 ATP5LO75964 103 aa13.57□□□□□ -0.24
PCF11-207ENST00000624931 NPYP01303 97 aa13.57□□□□□ -0.24
PCF11-207ENST00000624931 EGR2P11161 476 aaPredicted RBP13.57□□□□□ -0.24
PCF11-207ENST00000624931 FANCD2OSQ96PS1 177 aa13.57□□□□□ -0.24
PCF11-207ENST00000624931 TEX15Q9BXT5 2789 aa13.57□□□□□ -0.24
PCF11-207ENST00000624931 ZMAT4Q9H898 229 aa13.57□□□□□ -0.24
PCF11-207ENST00000624931 IGHV7-81A0A0B4J1V7 117 aa13.56□□□□□ -0.24
PCF11-207ENST00000624931 SMIM17P0DL12 118 aa13.56□□□□□ -0.24
PCF11-207ENST00000624931 ARPC1AQ92747 370 aa13.56□□□□□ -0.24
PCF11-207ENST00000624931 TMSB15BA0A087X1C1 80 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms