RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 TMEM8BA6NDV4 472 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 HIST1H1AQ02539 215 aaPredicted RBP6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 LY6EQ16553 131 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 TMEM78Q5T7P6 136 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 NRGNQ92686 78 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 TIMM8BQ9Y5J9 83 aaPredicted RBP6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 KMT2BQ9UMN6 2715 aaPredicted RBP6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 A6NDX4 124 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 H3BUA1 57 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 H3BUX3 64 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 BRI3O95415 125 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 IGHG2P01859 326 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 MSMBP08118 114 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 CKS2P33552 79 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 GLMPQ8WWB7 406 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 ZNF747Q9BV97 191 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 NAV2Q8IVL1 2488 aa6.38□□□□□ -1.39
SND1-IT1-201ENST00000623342 AKAP9Q99996 3911 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 HSBP1L1C9JCN9 74 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 H0Y8G0 127 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 ZNF25P17030 456 aaPredicted RBP6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 PPIFP30405 207 aaKnown RBP6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 FAM106AQ4KMX7 169 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 LINC01545Q5VT33 79 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 C9orf47Q6ZRZ4 202 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 USMG5Q96IX5 58 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 C16orf92Q96LL3 132 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 hDV102S1A0JD36 115 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 NDUFA4O00483 81 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 G0S2P27469 103 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 C9orf139Q6ZV77 190 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 PPP1R14DQ9NXH3 145 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 MSRB1Q9NZV6 116 aa6.37□□□□□ -1.39
SND1-IT1-201ENST00000623342 A0A096LNJ9 63 aa6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 IGKV3D-20A0A0C4DH25 116 aa6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 SMKR1H3BMG3 65 aa6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 TRBV12-3P01733 135 aa6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 PPBPP02775 128 aa6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 LOXL1Q08397 574 aaPredicted RBP6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 RNF185Q96GF1 192 aa6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 NPYP01303 97 aa6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 UNQ9165/PRO28630Q6UXU0 137 aa6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 STPG4Q8N801 248 aa6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 SPOCK3Q9BQ16 436 aa6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 MCRIP2Q9BUT9 160 aaKnown RBP6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 MS4A6AQ9H2W1 248 aa6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 C11orf21Q9P2W6 132 aa6.36□□□□□ -1.39
SND1-IT1-201ENST00000623342 SONP18583 2426 aaKnown RBP6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 ITPR3Q14573 2671 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 NIPBLQ6KC79 2804 aaeCLIP6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 B4DSR2 109 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 SMAD7O15105 426 aaKnown RBP6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 TCF21O43680 179 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 NCR2O95944 276 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 HBDP02042 147 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 PF4V1P10720 104 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 TFPI2P48307 235 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 BLCAPP62952 87 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 TMEM208Q9BTX3 173 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 IGHV3-11P01762 117 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 HINT1P49773 126 aaPredicted RBP6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 DSCR9P59020 149 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 SRSF1Q07955 248 aaKnown RBP eCLIP6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 PRSS57Q6UWY2 283 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 ZNF738Q8NE65 137 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 PMCHL2Q9BQD1 86 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 KLK15Q9H2R5 256 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 MAP1LC3AQ9H492 121 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 LENEPQ9Y5L5 61 aa6.35□□□□□ -1.39
SND1-IT1-201ENST00000623342 DLEU1O43261 78 aa6.34□□□□□ -1.39
SND1-IT1-201ENST00000623342 GAGE1Q13065 139 aa6.34□□□□□ -1.39
SND1-IT1-201ENST00000623342 SLC25A34Q6PIV7 304 aa6.34□□□□□ -1.39
SND1-IT1-201ENST00000623342 OR4X2Q8NGF9 303 aa6.34□□□□□ -1.39
SND1-IT1-201ENST00000623342 OR8A1Q8NGG7 326 aa6.34□□□□□ -1.39
SND1-IT1-201ENST00000623342 C20orf173Q96LM9 149 aa6.34□□□□□ -1.39
SND1-IT1-201ENST00000623342 SCRT2Q9NQ03 307 aa6.34□□□□□ -1.39
SND1-IT1-201ENST00000623342 ACANP16112 2415 aa6.34□□□□□ -1.39
SND1-IT1-201ENST00000623342 HECTD1Q9ULT8 2610 aa6.34□□□□□ -1.39
SND1-IT1-201ENST00000623342 A0A0G2JLM5 398 aa6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 IGHV7-4-1A0A0J9YVY3 117 aa6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 OVOL1O14753 267 aa6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 AVPP01185 164 aa6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 IGLV1-40P01703 118 aa6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 GATA3P23771 443 aa6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 FOXE3Q13461 319 aa6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 Q6ZS46 218 aa6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 GPHB5Q86YW7 130 aa6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 LINC00477Q96M19 166 aa6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 NPFFR1Q9GZQ6 430 aa6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 SETD2Q9BYW2 2564 aaPredicted RBP6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 FLNAP21333 2647 aaKnown RBP6.34□□□□□ -1.4
SND1-IT1-201ENST00000623342 LINC01546A6NGU7 62 aa6.33□□□□□ -1.4
SND1-IT1-201ENST00000623342 SOCS3O14543 225 aa6.33□□□□□ -1.4
SND1-IT1-201ENST00000623342 TNFRSF6BO95407 300 aa6.33□□□□□ -1.4
SND1-IT1-201ENST00000623342 LGALS9BQ3B8N2 356 aa6.33□□□□□ -1.4
SND1-IT1-201ENST00000623342 LGALS9CQ6DKI2 356 aa6.33□□□□□ -1.4
SND1-IT1-201ENST00000623342 SMIM15Q7Z3B0 74 aa6.33□□□□□ -1.4
SND1-IT1-201ENST00000623342 OR10J6PQ8NGY7 276 aa6.33□□□□□ -1.4
SND1-IT1-201ENST00000623342 FXYD7P58549 80 aa6.33□□□□□ -1.4
SND1-IT1-201ENST00000623342 CFHR3Q02985 330 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms