RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CCL18P55774 89 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 HERVK_113P61574 105 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 MORN3Q6PF18 240 aaPredicted RBP7□□□□□ -1.29
HDAC9-229ENST00000622668 RAI1Q7Z5J4 1906 aaPredicted RBP7□□□□□ -1.29
HDAC9-229ENST00000622668 SPATA25Q9BR10 227 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 IGKV3D-20A0A0C4DH25 116 aa6.99□□□□□ -1.29
HDAC9-229ENST00000622668 K7EMT4 169 aa6.99□□□□□ -1.29
HDAC9-229ENST00000622668 EBI3Q14213 229 aa6.99□□□□□ -1.29
HDAC9-229ENST00000622668 DEFB1P60022 68 aa6.99□□□□□ -1.29
HDAC9-229ENST00000622668 HBBP68871 147 aa6.99□□□□□ -1.29
HDAC9-229ENST00000622668 ZFAND6Q6FIF0 208 aa6.99□□□□□ -1.29
HDAC9-229ENST00000622668 ZNF705AQ6ZN79 300 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-229ENST00000622668 MRPL16Q9NX20 251 aaKnown RBP6.99□□□□□ -1.29
HDAC9-229ENST00000622668 POLR3KQ9Y2Y1 108 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-229ENST00000622668 LY6LH3BQJ8 138 aa6.99□□□□□ -1.29
HDAC9-229ENST00000622668 SCO1O75880 301 aa6.99□□□□□ -1.29
HDAC9-229ENST00000622668 SCGB1D4Q6XE38 83 aa6.99□□□□□ -1.29
HDAC9-229ENST00000622668 C17orf77Q96MU5 243 aa6.99□□□□□ -1.29
HDAC9-229ENST00000622668 ST20Q9HBF5 79 aa6.99□□□□□ -1.29
HDAC9-229ENST00000622668 SNCGO76070 127 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 TRAV9-2A0A087WT02 112 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 BUB3O43684 328 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 ATP5G1P05496 136 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 Q6AWC8 147 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 LURAP1LQ8IV03 231 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 REV3LO60673 3130 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 SH2D1AO60880 128 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 TCTAP57738 103 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 Q1RN00 199 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 C11orf45Q8TAV5 145 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 ADARB2-AS1A8MUL3 147 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 HLA-DQA1P01909 254 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 DEFB114Q30KQ6 69 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 ZNF506Q5JVG8 444 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 DMRTA1Q5VZB9 504 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 PRELID3AQ96N28 172 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 TCEAL7Q9BRU2 100 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 FLNCQ14315 2725 aa6.98□□□□□ -1.29
HDAC9-229ENST00000622668 ADMP35318 185 aa6.97□□□□□ -1.29
HDAC9-229ENST00000622668 CFAP161Q6P656 301 aa6.97□□□□□ -1.29
HDAC9-229ENST00000622668 Q9HAA7 133 aa6.97□□□□□ -1.29
HDAC9-229ENST00000622668 SPRY2O43597 315 aa6.97□□□□□ -1.29
HDAC9-229ENST00000622668 THAP8Q8NA92 274 aa6.97□□□□□ -1.29
HDAC9-229ENST00000622668 CCDC140Q96MF4 163 aa6.97□□□□□ -1.29
HDAC9-229ENST00000622668 F2Z2F3 143 aa6.97□□□□□ -1.29
HDAC9-229ENST00000622668 F8W735 103 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-229ENST00000622668 CACNG7P62955 275 aa6.97□□□□□ -1.29
HDAC9-229ENST00000622668 ANXA2RQ3ZCQ2 193 aa6.96□□□□□ -1.29
HDAC9-229ENST00000622668 MEIG1Q5JSS6 88 aa6.96□□□□□ -1.29
HDAC9-229ENST00000622668 OCC1Q8TAD7 63 aa6.96□□□□□ -1.29
HDAC9-229ENST00000622668 C8orf49Q96NF6 230 aa6.96□□□□□ -1.29
HDAC9-229ENST00000622668 PYGO2Q9BRQ0 406 aa6.96□□□□□ -1.29
HDAC9-229ENST00000622668 AP5S1Q9NUS5 200 aa6.96□□□□□ -1.29
HDAC9-229ENST00000622668 MT-ND6P03923 174 aa6.96□□□□□ -1.3
HDAC9-229ENST00000622668 PSMB8P28062 276 aa6.96□□□□□ -1.3
HDAC9-229ENST00000622668 C16orf54Q6UWD8 224 aa6.96□□□□□ -1.3
HDAC9-229ENST00000622668 C18orf15Q96N68 181 aa6.96□□□□□ -1.3
HDAC9-229ENST00000622668 DIRC3C9JPN6 131 aa6.96□□□□□ -1.3
HDAC9-229ENST00000622668 GFI1BQ5VTD9 330 aa6.96□□□□□ -1.3
HDAC9-229ENST00000622668 TMEM256Q8N2U0 113 aa6.96□□□□□ -1.3
HDAC9-229ENST00000622668 C2orf88Q9BSF0 95 aa6.96□□□□□ -1.3
HDAC9-229ENST00000622668 MRPL36Q9P0J6 103 aaKnown RBP6.96□□□□□ -1.3
HDAC9-229ENST00000622668 U3KQE9 123 aa6.96□□□□□ -1.3
HDAC9-229ENST00000622668 RHODO00212 210 aa6.96□□□□□ -1.3
HDAC9-229ENST00000622668 APOHP02749 345 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-229ENST00000622668 EVI2AP22794 236 aa6.96□□□□□ -1.3
HDAC9-229ENST00000622668 ZNF114Q8NC26 417 aa6.96□□□□□ -1.3
HDAC9-229ENST00000622668 SLAQ13239 276 aa6.95□□□□□ -1.3
HDAC9-229ENST00000622668 MBD3L1Q8WWY6 194 aa6.95□□□□□ -1.3
HDAC9-229ENST00000622668 DERL1Q9BUN8 251 aa6.95□□□□□ -1.3
HDAC9-229ENST00000622668 AGPAT4-IT1Q9H0P7 198 aa6.95□□□□□ -1.3
HDAC9-229ENST00000622668 CRIP3Q6Q6R5 217 aa6.95□□□□□ -1.3
HDAC9-229ENST00000622668 ZNF493Q6ZR52 646 aa6.95□□□□□ -1.3
HDAC9-229ENST00000622668 CBLN2Q8IUK8 224 aa6.95□□□□□ -1.3
HDAC9-229ENST00000622668 MAP6D1Q9H9H5 199 aa6.95□□□□□ -1.3
HDAC9-229ENST00000622668 TEX48A0A1B0GUV7 120 aa6.95□□□□□ -1.3
HDAC9-229ENST00000622668 PFN1P07737 140 aaKnown RBP6.95□□□□□ -1.3
HDAC9-229ENST00000622668 IFI27P40305 119 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-229ENST00000622668 ORMDL3Q8N138 153 aa6.95□□□□□ -1.3
HDAC9-229ENST00000622668 ZNRF2Q8NHG8 242 aa6.95□□□□□ -1.3
HDAC9-229ENST00000622668 ZNF414Q96IQ9 312 aa6.95□□□□□ -1.3
HDAC9-229ENST00000622668 PTTG1IPP53801 180 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 TMEM170BQ5T4T1 132 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 LYZL1Q6UWQ5 148 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 SRP19P09132 144 aaKnown RBP6.94□□□□□ -1.3
HDAC9-229ENST00000622668 VWC2Q2TAL6 325 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 Q6ZPA2 131 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 NUDT10Q8NFP7 164 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 RNF183Q96D59 192 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 NUDT11Q96G61 164 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 WFDC10AQ9H1F0 79 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 CPAMD8Q8IZJ3 1885 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 NOTCH1P46531 2555 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 TMEM213A2RRL7 107 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 IGLV2-14P01704 120 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 Q86TA4 180 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-229ENST00000622668 MAP1LC3CQ9BXW4 147 aa6.94□□□□□ -1.3
HDAC9-229ENST00000622668 MRPL18Q9H0U6 180 aaKnown RBP6.93□□□□□ -1.3
HDAC9-229ENST00000622668 VCX2Q9H322 139 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms