RNA–Protein interactions for RNA: ENST00000620149.1

SPTSSB-205, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 BASIC

Gene SPTSSB, Length 231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-205ENST00000620149 IGLV3-32A0A0A0MS00 114 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 TMEM30CPA0ZSE6 113 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 LINC00587B1AMM8 73 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 ATP6V1G2-DDX39BF2Z307 99 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 CD3DP04234 171 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 CD14P08571 375 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 HIST1H1DP16402 221 aaKnown RBP0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 ADCYAP1P18509 176 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 GNG4P50150 75 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 ROMO1P60602 79 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 PPP3R1P63098 170 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 MIR22HGQ0VDD5 57 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 IQCJQ1A5X6 159 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 ASB16-AS1Q495Z4 193 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 SPANXN1Q5VSR9 72 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 Q5XG85 94 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 OR2T2Q6IF00 324 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 MRPL54Q6P161 138 aaKnown RBP0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 Q6ZUT4 128 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 SLC25A26Q70HW3 274 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 VSTM2AQ8TAG5 236 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 DYNLRB2Q8TF09 96 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 MRPL57Q9BQC6 102 aaKnown RBP0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 NAA38Q9BRA0 125 aaKnown RBP0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 SEC11CQ9BY50 192 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 TMEM106BQ9NUM4 274 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 TMEM242Q9NWH2 141 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 ZFP30Q9Y2G7 519 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 LSM2Q9Y333 95 aaKnown RBP0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 DNAJC15Q9Y5T4 150 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 SCN3AQ9NY46 2000 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 COL1A2P08123 1366 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 KTN1Q86UP2 1357 aaKnown RBP0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 SPEF2Q9C093 1822 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 FAM135BQ49AJ0 1406 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 NCOA3Q9Y6Q9 1424 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 ARID1AO14497 2285 aa0.8□□□□□ -2.28
SPTSSB-205ENST00000620149 MYH1P12882 1939 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 MYH9P35579 1960 aaKnown RBP0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 SYNJ1O43426 1573 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 ATRXP46100 2492 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 MPDZO75970 2070 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 KIAA2026Q5HYC2 2103 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 TRAV12-2A0A075B6T6 113 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 IGKV2-40A0A087WW87 121 aaPredicted RBP0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 TRBV6-7A0A0A0MS04 114 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 TRAV2A0A0B4J234 112 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 TCRBV3S1A0A5B6 114 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 FAM24AA6NFZ4 105 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 APOC4-APOC2K7ER74 178 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 CORTO00230 105 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 CCL16O15467 120 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 KLF7O75840 302 aaPredicted RBP0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 NDUFB6O95139 128 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 PPYP01298 95 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 IGKV2D-40P01614 121 aaPredicted RBP0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 IGLV1-51P01701 117 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 APOC2P02655 101 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 PRB4P10163 310 aaPredicted RBP0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 PDE6HQ13956 83 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 RHOHQ15669 191 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 MPV17LQ2QL34 196 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 Q56UQ5 140 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 OCIAD2Q56VL3 154 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 C10orf55Q5SWW7 151 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 MIC13Q5XKP0 118 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 ATP11AUNQ6ZP68 121 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 FOXI2Q6ZQN5 318 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 LINC00299Q6ZSB3 139 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 ZNF833PQ6ZTB9 187 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 C8orf59Q8N0T1 100 aaPredicted RBP0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 CCL4L1Q8NHW4 92 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 Q8TAT8 98 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 PP6455Q8WZ26 134 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 PPP3R2Q96LZ3 170 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 LINC00052Q96N35 136 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 WFDC10AQ9H1F0 79 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 RPRMQ9NS64 109 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 MED9Q9NWA0 146 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 SCN3BQ9NY72 215 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 PCDH15Q96QU1 1955 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 PTPRGP23470 1445 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 FGD6Q6ZV73 1430 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 FAM135AQ9P2D6 1515 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 SDK2Q58EX2 2172 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 GLI3P10071 1580 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 BICRAQ9NZM4 1560 aa0.79□□□□□ -2.28
SPTSSB-205ENST00000620149 MYH13Q9UKX3 1938 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 MICAL3Q7RTP6 2002 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 A0A087WSZ3 146 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 TRBV6-4A0A1B0GX49 114 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 B4DSR2 109 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 JMJD7-PLA2G4BH0Y9G9 81 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 CCDC179H3BU77 68 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 M0R2P5 195 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 IGF2P01344 180 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 IFNA17P01571 189 aa0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 PRB2P02812 416 aaPredicted RBP0.78□□□□□ -2.28
SPTSSB-205ENST00000620149 PIRTP0C851 137 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms