RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 MAP1LC3AQ9H492 121 aa11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 FBLL1A6NHQ2 334 aaKnown RBP11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 FABP5P3A8MUU1 101 aa11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 GCSHP23434 173 aa11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 DTX2Q86UW9 622 aa11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 BOD1L2Q8IYS8 172 aa11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 KLK15Q9H2R5 256 aa11.05□□□□□ -0.64
PCDHGA3-203ENST00000619750 CCDC140Q96MF4 163 aa11.04□□□□□ -0.64
PCDHGA3-203ENST00000619750 AGPAT4-IT1Q9H0P7 198 aa11.04□□□□□ -0.64
PCDHGA3-203ENST00000619750 M0R1W7 72 aa11.04□□□□□ -0.64
PCDHGA3-203ENST00000619750 SAA4P35542 130 aa11.04□□□□□ -0.64
PCDHGA3-203ENST00000619750 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.04□□□□□ -0.64
PCDHGA3-203ENST00000619750 Q8N6K4 173 aa11.04□□□□□ -0.64
PCDHGA3-203ENST00000619750 UTP20O75691 2785 aaKnown RBP11.04□□□□□ -0.64
PCDHGA3-203ENST00000619750 ITPR1Q14643 2758 aa11.04□□□□□ -0.64
PCDHGA3-203ENST00000619750 BUB3O43684 328 aa11.03□□□□□ -0.64
PCDHGA3-203ENST00000619750 RIPPLY3P57055 190 aa11.03□□□□□ -0.64
PCDHGA3-203ENST00000619750 S100A7AQ86SG5 101 aa11.03□□□□□ -0.64
PCDHGA3-203ENST00000619750 CCDC144NLQ6NUI1 221 aa11.03□□□□□ -0.64
PCDHGA3-203ENST00000619750 ZFAND3Q9H8U3 227 aa11.03□□□□□ -0.64
PCDHGA3-203ENST00000619750 UBTD1Q9HAC8 227 aa11.03□□□□□ -0.64
PCDHGA3-203ENST00000619750 TMEM160Q9NX00 188 aa11.03□□□□□ -0.64
PCDHGA3-203ENST00000619750 CLPSL1A2RUU4 121 aa11.02□□□□□ -0.64
PCDHGA3-203ENST00000619750 EFNA4P52798 201 aa11.02□□□□□ -0.64
PCDHGA3-203ENST00000619750 ADAMTSL5Q6ZMM2 481 aa11.02□□□□□ -0.64
PCDHGA3-203ENST00000619750 ZNF502Q8TBZ5 544 aa11.02□□□□□ -0.64
PCDHGA3-203ENST00000619750 AGRNO00468 2067 aa11.02□□□□□ -0.64
PCDHGA3-203ENST00000619750 A0A0G2JLM5 398 aa11.02□□□□□ -0.65
PCDHGA3-203ENST00000619750 FXYD2P54710 66 aa11.02□□□□□ -0.65
PCDHGA3-203ENST00000619750 C11orf71Q6IPW1 123 aa11.02□□□□□ -0.65
PCDHGA3-203ENST00000619750 CSPG4Q6UVK1 2322 aa11.01□□□□□ -0.65
PCDHGA3-203ENST00000619750 H3BVH4 76 aa11.01□□□□□ -0.65
PCDHGA3-203ENST00000619750 SEC11AP67812 179 aa11.01□□□□□ -0.65
PCDHGA3-203ENST00000619750 ODF1Q14990 250 aa11.01□□□□□ -0.65
PCDHGA3-203ENST00000619750 MEGF9Q9H1U4 602 aa11.01□□□□□ -0.65
PCDHGA3-203ENST00000619750 TRAV40A0A0B4J280 105 aa11.01□□□□□ -0.65
PCDHGA3-203ENST00000619750 PRR9Q5T870 116 aa11.01□□□□□ -0.65
PCDHGA3-203ENST00000619750 ZC2HC1BQ5TFG8 222 aa11.01□□□□□ -0.65
PCDHGA3-203ENST00000619750 ZNF48Q96MX3 618 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA3-203ENST00000619750 ABCA2Q9BZC7 2435 aa11□□□□□ -0.65
PCDHGA3-203ENST00000619750 TRAV8-2A0A0B4J237 113 aa11□□□□□ -0.65
PCDHGA3-203ENST00000619750 A6NDN8 102 aa11□□□□□ -0.65
PCDHGA3-203ENST00000619750 C9orf118A6NHY6 69 aa11□□□□□ -0.65
PCDHGA3-203ENST00000619750 LCNL1Q6ZST4 164 aa11□□□□□ -0.65
PCDHGA3-203ENST00000619750 C8orf86Q6ZUL3 223 aa11□□□□□ -0.65
PCDHGA3-203ENST00000619750 GLMPQ8WWB7 406 aa11□□□□□ -0.65
PCDHGA3-203ENST00000619750 RPS20P60866 119 aaKnown RBP11□□□□□ -0.65
PCDHGA3-203ENST00000619750 HSD52Q0P140 79 aa11□□□□□ -0.65
PCDHGA3-203ENST00000619750 BRD3OSQ6XYD6 125 aa11□□□□□ -0.65
PCDHGA3-203ENST00000619750 PSMG3-AS1Q96PY0 264 aa11□□□□□ -0.65
PCDHGA3-203ENST00000619750 BPESC1Q9GZL8 116 aa11□□□□□ -0.65
PCDHGA3-203ENST00000619750 DOPEY2Q9Y3R5 2298 aa10.99□□□□□ -0.65
PCDHGA3-203ENST00000619750 GOSR1O95249 250 aa10.99□□□□□ -0.65
PCDHGA3-203ENST00000619750 TRBV12-3P01733 135 aa10.99□□□□□ -0.65
PCDHGA3-203ENST00000619750 TMEM78Q5T7P6 136 aa10.99□□□□□ -0.65
PCDHGA3-203ENST00000619750 SPANXN1Q5VSR9 72 aa10.99□□□□□ -0.65
PCDHGA3-203ENST00000619750 SIRPDQ9H106 197 aa10.99□□□□□ -0.65
PCDHGA3-203ENST00000619750 HHLA3Q9XRX5 114 aa10.99□□□□□ -0.65
PCDHGA3-203ENST00000619750 M0R381 172 aa10.99□□□□□ -0.65
PCDHGA3-203ENST00000619750 FCER1GP30273 86 aa10.99□□□□□ -0.65
PCDHGA3-203ENST00000619750 OR1N2Q8NGR9 330 aa10.99□□□□□ -0.65
PCDHGA3-203ENST00000619750 AJUBAQ96IF1 538 aa10.99□□□□□ -0.65
PCDHGA3-203ENST00000619750 MRPL35Q9NZE8 188 aaKnown RBP10.99□□□□□ -0.65
PCDHGA3-203ENST00000619750 CENPEQ02224 2701 aa10.98□□□□□ -0.65
PCDHGA3-203ENST00000619750 SMIM17P0DL12 118 aa10.98□□□□□ -0.65
PCDHGA3-203ENST00000619750 OR2K2Q8NGT1 345 aa10.98□□□□□ -0.65
PCDHGA3-203ENST00000619750 FAM110DQ8TAY7 271 aaPredicted RBP10.98□□□□□ -0.65
PCDHGA3-203ENST00000619750 WFDC12Q8WWY7 111 aa10.98□□□□□ -0.65
PCDHGA3-203ENST00000619750 SORL1Q92673 2214 aa10.98□□□□□ -0.65
PCDHGA3-203ENST00000619750 SCGB2A1O75556 95 aa10.98□□□□□ -0.65
PCDHGA3-203ENST00000619750 IGHV3-11P01762 117 aa10.98□□□□□ -0.65
PCDHGA3-203ENST00000619750 IGKCP01834 107 aa10.98□□□□□ -0.65
PCDHGA3-203ENST00000619750 RPL11P62913 178 aaKnown RBP10.98□□□□□ -0.65
PCDHGA3-203ENST00000619750 COTL1Q14019 142 aa10.98□□□□□ -0.65
PCDHGA3-203ENST00000619750 SPCS1Q9Y6A9 102 aa10.98□□□□□ -0.65
PCDHGA3-203ENST00000619750 F6UB75 175 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 H3BRM9 83 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 FBXL19-AS1Q494R0 122 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 C16orf92Q96LL3 132 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 C20orf173Q96LM9 149 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 HIF1ANQ9NWT6 349 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 NHP2Q9NX24 153 aaKnown RBP10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 IGHV7-4-1A0A0J9YVY3 117 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 UNQ9165/PRO28630Q6UXU0 137 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 COX8CQ7Z4L0 72 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 MTURNQ8N3F0 131 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 OR9G4Q8NGQ1 327 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 CHAC1Q9BUX1 264 aa10.97□□□□□ -0.65
PCDHGA3-203ENST00000619750 SRD5A1P18405 259 aa10.96□□□□□ -0.65
PCDHGA3-203ENST00000619750 UFSP1Q6NVU6 142 aa10.96□□□□□ -0.65
PCDHGA3-203ENST00000619750 MAPKAPK5-AS1Q8N8E1 139 aa10.96□□□□□ -0.65
PCDHGA3-203ENST00000619750 METTL26Q96S19 204 aa10.96□□□□□ -0.65
PCDHGA3-203ENST00000619750 EBI3Q14213 229 aa10.96□□□□□ -0.66
PCDHGA3-203ENST00000619750 LY6EQ16553 131 aa10.96□□□□□ -0.66
PCDHGA3-203ENST00000619750 TRBV25-1A0A075B6N4 114 aa10.95□□□□□ -0.66
PCDHGA3-203ENST00000619750 K7EP34 96 aa10.95□□□□□ -0.66
PCDHGA3-203ENST00000619750 MINOS1Q5TGZ0 78 aa10.95□□□□□ -0.66
PCDHGA3-203ENST00000619750 NEGR1Q7Z3B1 354 aa10.95□□□□□ -0.66
PCDHGA3-203ENST00000619750 NXT2Q9NPJ8 142 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms