RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 LINC00588Q9Y4M8 146 aa7.8□□□□□ -1.16
TARDBP-221ENST00000619555 KANTRA0A1W2PQU2 76 aa7.79□□□□□ -1.16
TARDBP-221ENST00000619555 NPIPB6E9PJ23 425 aa7.79□□□□□ -1.16
TARDBP-221ENST00000619555 MBP02144 154 aa7.79□□□□□ -1.16
TARDBP-221ENST00000619555 CT45A10P0DMU9 189 aa7.79□□□□□ -1.16
TARDBP-221ENST00000619555 GCHFRP30047 84 aa7.79□□□□□ -1.16
TARDBP-221ENST00000619555 FHITP49789 147 aa7.79□□□□□ -1.16
TARDBP-221ENST00000619555 C4orf48Q5BLP8 95 aa7.79□□□□□ -1.16
TARDBP-221ENST00000619555 SUN5Q8TC36 379 aa7.79□□□□□ -1.16
TARDBP-221ENST00000619555 RNASE8Q8TDE3 154 aaKnown RBP7.79□□□□□ -1.16
TARDBP-221ENST00000619555 ZNF471Q9BX82 626 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-221ENST00000619555 AAMDCQ9H7C9 122 aa7.79□□□□□ -1.16
TARDBP-221ENST00000619555 PRELID1Q9Y255 219 aa7.79□□□□□ -1.16
TARDBP-221ENST00000619555 TIMM8BQ9Y5J9 83 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-221ENST00000619555 H7BYZ3 331 aa7.78□□□□□ -1.16
TARDBP-221ENST00000619555 CCL18P55774 89 aa7.78□□□□□ -1.16
TARDBP-221ENST00000619555 ZNF493Q6ZR52 646 aa7.78□□□□□ -1.16
TARDBP-221ENST00000619555 C6orf223Q8N319 242 aa7.78□□□□□ -1.16
TARDBP-221ENST00000619555 OR10J6PQ8NGY7 276 aa7.78□□□□□ -1.16
TARDBP-221ENST00000619555 TMEM263Q8WUH6 116 aaKnown RBP7.78□□□□□ -1.16
TARDBP-221ENST00000619555 VGLL1Q99990 258 aa7.78□□□□□ -1.16
TARDBP-221ENST00000619555 ACTR3CQ9C0K3 210 aaPredicted RBP7.78□□□□□ -1.16
TARDBP-221ENST00000619555 AGPAT4-IT1Q9H0P7 198 aa7.78□□□□□ -1.16
TARDBP-221ENST00000619555 CTXND1A0A1B0GTU2 59 aa7.77□□□□□ -1.17
TARDBP-221ENST00000619555 J3KRW8 73 aa7.77□□□□□ -1.17
TARDBP-221ENST00000619555 FGF8P55075 233 aaPredicted RBP7.77□□□□□ -1.17
TARDBP-221ENST00000619555 OR5I1Q13606 314 aa7.77□□□□□ -1.17
TARDBP-221ENST00000619555 AKR1C8PQ5T2L2 129 aa7.77□□□□□ -1.17
TARDBP-221ENST00000619555 GFI1BQ5VTD9 330 aa7.77□□□□□ -1.17
TARDBP-221ENST00000619555 C9orf47Q6ZRZ4 202 aa7.77□□□□□ -1.17
TARDBP-221ENST00000619555 LYPD1Q8N2G4 141 aa7.77□□□□□ -1.17
TARDBP-221ENST00000619555 FAM19A4Q96LR4 140 aa7.77□□□□□ -1.17
TARDBP-221ENST00000619555 TMPRSS5Q9H3S3 457 aa7.77□□□□□ -1.17
TARDBP-221ENST00000619555 TRAV26-1A0A087WT03 109 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 A0A0J9YY99 117 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 PGPA6NDG6 321 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 C16orf90A8MZG2 172 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 DIRC3C9JPN6 131 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 PFDN1O60925 122 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 CXorf1O96002 111 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 SEC11BP0C7V7 166 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 GNG5P63218 68 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 PRR9Q5T870 116 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 CCDC28AQ8IWP9 274 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 C9orf62Q8N4C0 152 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 LINC00612Q8N6U2 182 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 Q8TAT8 98 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 STOML3Q8TAV4 291 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 TMED6Q8WW62 240 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 HYLS1Q96M11 299 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 ODF3Q96PU9 254 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 C20orf144Q9BQM9 153 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 OTORQ9NRC9 128 aa7.76□□□□□ -1.17
TARDBP-221ENST00000619555 TRAV12-3A0A0B4J271 114 aa7.75□□□□□ -1.17
TARDBP-221ENST00000619555 GAGE12BA1L429 117 aa7.75□□□□□ -1.17
TARDBP-221ENST00000619555 GGTLC3B5MD39 225 aa7.75□□□□□ -1.17
TARDBP-221ENST00000619555 GAGE7O76087 117 aa7.75□□□□□ -1.17
TARDBP-221ENST00000619555 GAGE12FP0CL80 117 aa7.75□□□□□ -1.17
TARDBP-221ENST00000619555 GAGE12GP0CL81 117 aa7.75□□□□□ -1.17
TARDBP-221ENST00000619555 GAGE12IP0CL82 117 aa7.75□□□□□ -1.17
TARDBP-221ENST00000619555 HOXA5P20719 270 aa7.75□□□□□ -1.17
TARDBP-221ENST00000619555 Q6ZQT7 251 aa7.75□□□□□ -1.17
TARDBP-221ENST00000619555 Q9H8V8 135 aa7.75□□□□□ -1.17
TARDBP-221ENST00000619555 ZNF492Q9P255 531 aa7.75□□□□□ -1.17
TARDBP-221ENST00000619555 RPH3ALQ9UNE2 315 aa7.75□□□□□ -1.17
TARDBP-221ENST00000619555 MAP1LC3B2A6NCE7 125 aa7.74□□□□□ -1.17
TARDBP-221ENST00000619555 KLLNB2CW77 178 aa7.74□□□□□ -1.17
TARDBP-221ENST00000619555 TPT1P13693 172 aaKnown RBP7.74□□□□□ -1.17
TARDBP-221ENST00000619555 NKX2-5P52952 324 aaPredicted RBP7.74□□□□□ -1.17
TARDBP-221ENST00000619555 BTN1A1Q13410 526 aa7.74□□□□□ -1.17
TARDBP-221ENST00000619555 IQCF2Q8IXL9 164 aa7.74□□□□□ -1.17
TARDBP-221ENST00000619555 ZFAND2AQ8N6M9 145 aa7.74□□□□□ -1.17
TARDBP-221ENST00000619555 RXFP4Q8TDU9 374 aa7.74□□□□□ -1.17
TARDBP-221ENST00000619555 LINC00477Q96M19 166 aa7.74□□□□□ -1.17
TARDBP-221ENST00000619555 KRTAP1-5Q9BYS1 174 aa7.74□□□□□ -1.17
TARDBP-221ENST00000619555 MAP1LC3BQ9GZQ8 125 aa7.74□□□□□ -1.17
TARDBP-221ENST00000619555 TMEM167BQ9NRX6 74 aa7.74□□□□□ -1.17
TARDBP-221ENST00000619555 FAT1Q14517 4588 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 TRAV8-1A0A0A6YYK1 113 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 RBAKDNA6NC62 111 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 SNURFLB1AK76 121 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 CRISP2P16562 243 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 LEPP41159 167 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 CSN1S1P47710 185 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 UBE2G2P60604 165 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 ESRGQ1W209 222 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 ZFP69Q49AA0 526 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 TMEM78Q5T7P6 136 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 Q6ZTI0 123 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 GOLT1AQ6ZVE7 132 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 FAM213BQ8TBF2 198 aa7.73□□□□□ -1.17
TARDBP-221ENST00000619555 C7orf71A4D174 169 aa7.72□□□□□ -1.17
TARDBP-221ENST00000619555 FAM74A7A6NL05 159 aa7.72□□□□□ -1.17
TARDBP-221ENST00000619555 UMAD1C9J7I0 102 aa7.72□□□□□ -1.17
TARDBP-221ENST00000619555 ZNF324O75467 553 aaPredicted RBP7.72□□□□□ -1.17
TARDBP-221ENST00000619555 SLC25A5P05141 298 aaKnown RBP7.72□□□□□ -1.17
TARDBP-221ENST00000619555 ZNF138P52744 262 aa7.72□□□□□ -1.17
TARDBP-221ENST00000619555 SUMO1P63165 101 aaKnown RBP7.72□□□□□ -1.17
TARDBP-221ENST00000619555 EIF5AP63241 154 aaKnown RBP7.72□□□□□ -1.17
TARDBP-221ENST00000619555 SLC51BQ86UW2 128 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms