RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 IGKV3-7A0A075B6H7 116 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 SMAD7O15105 426 aaKnown RBP8.58□□□□□ -1.04
TP53-223ENST00000618944 IGF1P05019 195 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 ARL3P36405 182 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 DEFB1P60022 68 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 CACNG7P62955 275 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 C18orf15Q96N68 181 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 PIMREGQ9BSJ6 248 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 RBAKDNA6NC62 111 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 UBE2V1Q13404 147 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 Q6ZS46 218 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 ORAOV1Q8WV07 137 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 MS4A6AQ9H2W1 248 aa8.58□□□□□ -1.04
TP53-223ENST00000618944 CELSR2Q9HCU4 2923 aa8.57□□□□□ -1.04
TP53-223ENST00000618944 SPRY2O43597 315 aa8.57□□□□□ -1.04
TP53-223ENST00000618944 HBDP02042 147 aa8.57□□□□□ -1.04
TP53-223ENST00000618944 BLCAPP62952 87 aa8.57□□□□□ -1.04
TP53-223ENST00000618944 C20orf173Q96LM9 149 aa8.57□□□□□ -1.04
TP53-223ENST00000618944 KLK15Q9H2R5 256 aa8.57□□□□□ -1.04
TP53-223ENST00000618944 IGHV4-30-2A0A087WSY4 118 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 H3BUX3 64 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 RPL11P62913 178 aaKnown RBP8.56□□□□□ -1.04
TP53-223ENST00000618944 SRSF2Q01130 221 aaKnown RBP8.56□□□□□ -1.04
TP53-223ENST00000618944 VAMP3Q15836 100 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 ZNF738Q8NE65 137 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 MAP1LC3AQ9H492 121 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 U3KQE9 123 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 PKD1L2Q7Z442 2459 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 CSMD2Q7Z408 3487 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 TRAV26-2A0A0B4J265 109 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 TNFRSF6BO95407 300 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 ATP5J2P56134 94 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 ANKRD39Q53RE8 183 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 C19orf54Q5BKX5 351 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 BVES-AS1Q5T3Y7 98 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 OR4C5Q8NGB2 326 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 IFI27L1Q96BM0 104 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 CFAP46Q8IYW2 2715 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 ABCA2Q9BZC7 2435 aa8.56□□□□□ -1.04
TP53-223ENST00000618944 FAM223BA6NKX1 122 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 LEPP41159 167 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 HIST1H1AQ02539 215 aaPredicted RBP8.55□□□□□ -1.04
TP53-223ENST00000618944 FAM223AQ8IWN6 122 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 C10orf105Q8TEF2 133 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 CNFNQ9BYD5 112 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 UFC1Q9Y3C8 167 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 CBY3A6NI87 242 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 COX8AP10176 69 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 PF4V1P10720 104 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 PRR9Q5T870 116 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 GLMPQ8WWB7 406 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 MEGF9Q9H1U4 602 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 DKK2Q9UBU2 259 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 CRYBG3Q68DQ2 2970 aa8.55□□□□□ -1.04
TP53-223ENST00000618944 CLEC2AQ6UVW9 174 aa8.54□□□□□ -1.04
TP53-223ENST00000618944 C9orf47Q6ZRZ4 202 aa8.54□□□□□ -1.04
TP53-223ENST00000618944 NRGNQ92686 78 aa8.54□□□□□ -1.04
TP53-223ENST00000618944 UTP20O75691 2785 aaKnown RBP8.54□□□□□ -1.04
TP53-223ENST00000618944 IGHV7-4-1A0A0J9YVY3 117 aa8.54□□□□□ -1.04
TP53-223ENST00000618944 SRD5A1P18405 259 aa8.54□□□□□ -1.04
TP53-223ENST00000618944 SPANXN1Q5VSR9 72 aa8.54□□□□□ -1.04
TP53-223ENST00000618944 PPBPP02775 128 aa8.53□□□□□ -1.04
TP53-223ENST00000618944 LGALS9BQ3B8N2 356 aa8.53□□□□□ -1.04
TP53-223ENST00000618944 LGALS9CQ6DKI2 356 aa8.53□□□□□ -1.04
TP53-223ENST00000618944 C2orf91Q6ZV80 131 aa8.53□□□□□ -1.04
TP53-223ENST00000618944 GPHB5Q86YW7 130 aa8.53□□□□□ -1.04
TP53-223ENST00000618944 FLNCQ14315 2725 aa8.53□□□□□ -1.04
TP53-223ENST00000618944 F6UB75 175 aa8.53□□□□□ -1.04
TP53-223ENST00000618944 H3BVH4 76 aa8.53□□□□□ -1.04
TP53-223ENST00000618944 AVPP01185 164 aa8.53□□□□□ -1.04
TP53-223ENST00000618944 C12orf54Q6X4T0 127 aa8.53□□□□□ -1.04
TP53-223ENST00000618944 OR4X2Q8NGF9 303 aa8.53□□□□□ -1.04
TP53-223ENST00000618944 OR2K2Q8NGT1 345 aa8.53□□□□□ -1.04
TP53-223ENST00000618944 MRPL53Q96EL3 112 aaKnown RBP8.53□□□□□ -1.04
TP53-223ENST00000618944 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.52□□□□□ -1.055e-10■■■■□ 21
TP53-223ENST00000618944 TAX1BP3O14907 124 aa8.52□□□□□ -1.05
TP53-223ENST00000618944 TM4SF20Q53R12 229 aa8.52□□□□□ -1.05
TP53-223ENST00000618944 HIF1ANQ9NWT6 349 aa8.52□□□□□ -1.05
TP53-223ENST00000618944 A6NDX4 124 aa8.52□□□□□ -1.05
TP53-223ENST00000618944 NDUFA4O00483 81 aa8.52□□□□□ -1.05
TP53-223ENST00000618944 IGHG2P01859 326 aa8.52□□□□□ -1.05
TP53-223ENST00000618944 PRSS1P07477 247 aa8.52□□□□□ -1.05
TP53-223ENST00000618944 MSMBP08118 114 aa8.52□□□□□ -1.05
TP53-223ENST00000618944 EDN2P20800 178 aa8.52□□□□□ -1.05
TP53-223ENST00000618944 NMUP48645 174 aa8.52□□□□□ -1.05
TP53-223ENST00000618944 SMIM15Q7Z3B0 74 aa8.52□□□□□ -1.05
TP53-223ENST00000618944 TMEM158Q8WZ71 300 aa8.52□□□□□ -1.05
TP53-223ENST00000618944 FCER1GP30273 86 aa8.51□□□□□ -1.05
TP53-223ENST00000618944 CRIP2P52943 208 aaPredicted RBP8.51□□□□□ -1.05
TP53-223ENST00000618944 KIR3DS1Q14943 382 aa8.51□□□□□ -1.05
TP53-223ENST00000618944 C9orf139Q6ZV77 190 aa8.51□□□□□ -1.05
TP53-223ENST00000618944 NPFFR1Q9GZQ6 430 aa8.51□□□□□ -1.05
TP53-223ENST00000618944 PIEZO1Q92508 2521 aa8.51□□□□□ -1.05
TP53-223ENST00000618944 M0R381 172 aa8.51□□□□□ -1.05
TP53-223ENST00000618944 FGF6P10767 208 aa8.51□□□□□ -1.05
TP53-223ENST00000618944 RNASE4P34096 147 aaKnown RBP8.51□□□□□ -1.05
TP53-223ENST00000618944 TMEM95Q3KNT9 176 aa8.51□□□□□ -1.05
TP53-223ENST00000618944 AMMECR1LQ6DCA0 310 aa8.51□□□□□ -1.05
TP53-223ENST00000618944 PCP2Q8IVA1 136 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms