RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 TMEM258P61165 79 aa5.81□□□□□ -1.48
PDE6A-205ENST00000617647 UBE2D2P62837 147 aa5.81□□□□□ -1.48
PDE6A-205ENST00000617647 ODF3Q96PU9 254 aa5.81□□□□□ -1.48
PDE6A-205ENST00000617647 PRR14LQ5THK1 2151 aa5.81□□□□□ -1.48
PDE6A-205ENST00000617647 IGLV3-32A0A0A0MS00 114 aa5.81□□□□□ -1.48
PDE6A-205ENST00000617647 INS-IGF2F8WCM5 200 aa5.81□□□□□ -1.48
PDE6A-205ENST00000617647 NSUN5P1Q3KNT7 163 aa5.81□□□□□ -1.48
PDE6A-205ENST00000617647 C1orf195Q5TG92 126 aa5.81□□□□□ -1.48
PDE6A-205ENST00000617647 LINC00643Q86TS7 51 aa5.81□□□□□ -1.48
PDE6A-205ENST00000617647 TMEM243Q9BU79 118 aa5.81□□□□□ -1.48
PDE6A-205ENST00000617647 JPT2Q9H910 190 aa5.81□□□□□ -1.48
PDE6A-205ENST00000617647 PHLDA3Q9Y5J5 127 aa5.81□□□□□ -1.48
PDE6A-205ENST00000617647 SRRM4A7MD48 611 aaKnown RBP5.8□□□□□ -1.48
PDE6A-205ENST00000617647 CXCL12P48061 93 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 KLF14Q8TD94 323 aaPredicted RBP5.8□□□□□ -1.48
PDE6A-205ENST00000617647 PLA2G2FQ9BZM2 168 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 IGKV3D-7A0A0C4DH55 119 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 ERCC8Q13216 396 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.8□□□□□ -1.48
PDE6A-205ENST00000617647 CLEC2BQ92478 149 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 C7orf69Q9H7B7 122 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 WNK2Q9Y3S1 2297 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 FREM1Q5H8C1 2179 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 PTPRSQ13332 1948 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 C5orf67F2Z3F1 127 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 PFN2P35080 140 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 UTF1Q5T230 341 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 ZCCHC24Q8N2G6 241 aaKnown RBP5.8□□□□□ -1.48
PDE6A-205ENST00000617647 C17orf77Q96MU5 243 aa5.8□□□□□ -1.48
PDE6A-205ENST00000617647 H3BT86 120 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 J3QQQ9 107 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 WIPF1O43516 503 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 ZNF134P52741 427 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 IGFL4Q6B9Z1 124 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 WDR86Q86TI4 376 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 MUSTN1Q8IVN3 82 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 CRYGBP07316 175 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 EGR2P11161 476 aaPredicted RBP5.79□□□□□ -1.48
PDE6A-205ENST00000617647 ZNF22P17026 224 aaPredicted RBP5.79□□□□□ -1.48
PDE6A-205ENST00000617647 PMS2CLQ68D20 193 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 CCL13Q99616 98 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 RP1L1Q8IWN7 2480 aaPredicted RBP5.79□□□□□ -1.48
PDE6A-205ENST00000617647 A0A0B4J2C4 111 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 IGHV3-35A0A0C4DH35 117 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 CEMP1Q6PRD7 247 aaPredicted RBP5.79□□□□□ -1.48
PDE6A-205ENST00000617647 KIR2DL5BQ8NHK3 375 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 PRR25Q96S07 402 aa5.79□□□□□ -1.48
PDE6A-205ENST00000617647 NCKAP5O14513 1909 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 IGHV3OR16-8A0A075B7F1 116 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 TRAV17A0A0B4J275 112 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 A0A0U1RRA0 63 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 RFPL3SP0C7P2 107 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 MYCNOSP40205 109 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 RPL11P62913 178 aaKnown RBP5.78□□□□□ -1.48
PDE6A-205ENST00000617647 RHOHQ15669 191 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 FAM201AQ5SY85 155 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 CD177Q8N6Q3 437 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 METTL26Q96S19 204 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 PRO0628Q9UI54 55 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 TRBV19A0A075B6N1 114 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 LMO7DNF2Z398 122 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 GP9P14770 177 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 UBE2D1P51668 147 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 RNF182Q8N6D2 247 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 SMIM2Q9BVW6 85 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 IMUPQ9GZP8 106 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 FAM236DA0A1B0GTK5 79 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 FAM236CP0DP71 79 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 RBM3P98179 157 aaKnown RBP5.78□□□□□ -1.48
PDE6A-205ENST00000617647 CIRBPQ14011 172 aaKnown RBP5.78□□□□□ -1.48
PDE6A-205ENST00000617647 DEFB127Q9H1M4 99 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 ZNRD1Q9P1U0 126 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 ICOSQ9Y6W8 199 aa5.78□□□□□ -1.48
PDE6A-205ENST00000617647 ADARB2-AS1A8MUL3 147 aa5.77□□□□□ -1.48
PDE6A-205ENST00000617647 NDUFC2O95298 119 aa5.77□□□□□ -1.48
PDE6A-205ENST00000617647 S100A7L2Q5SY68 101 aa5.77□□□□□ -1.48
PDE6A-205ENST00000617647 MBD3L2Q8NHZ7 208 aaPredicted RBP5.77□□□□□ -1.48
PDE6A-205ENST00000617647 COPS9Q8WXC6 57 aa5.77□□□□□ -1.48
PDE6A-205ENST00000617647 RNF125Q96EQ8 232 aa5.77□□□□□ -1.48
PDE6A-205ENST00000617647 THADAQ6YHU6 1953 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 RBMY1BA6NDE4 496 aaKnown RBP5.77□□□□□ -1.49
PDE6A-205ENST00000617647 RBMY1EA6NEQ0 496 aaKnown RBP5.77□□□□□ -1.49
PDE6A-205ENST00000617647 IGHV3-33P01772 117 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 RBMY1DP0C7P1 496 aaKnown RBP5.77□□□□□ -1.49
PDE6A-205ENST00000617647 RBMY1A1P0DJD3 496 aaKnown RBP5.77□□□□□ -1.49
PDE6A-205ENST00000617647 RBMY1CP0DJD4 496 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 MALP21145 153 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 WT1-ASQ06250 92 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 RBMY1FQ15415 496 aaKnown RBP5.77□□□□□ -1.49
PDE6A-205ENST00000617647 EML6Q6ZMW3 1958 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 SPRY2O43597 315 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 SUMO2P61956 95 aaKnown RBP5.77□□□□□ -1.49
PDE6A-205ENST00000617647 TP53TG1Q9Y2A0 90 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 U3KQK5 164 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 TRAV12-1A0A0B4J245 112 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 A0A0J9YY99 117 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 INAFM2P0DMQ5 153 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 SPINK14Q6IE38 97 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 ZMAT4Q9H898 229 aa5.77□□□□□ -1.49
PDE6A-205ENST00000617647 NDUFA4L2Q9NRX3 87 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms