RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 UFC1Q9Y3C8 167 aa11.94□□□□□ -0.5
NR1H3-235ENST00000616973 FAM208BQ5VWN6 2430 aa11.93□□□□□ -0.5
NR1H3-235ENST00000616973 FOXE3Q13461 319 aa11.93□□□□□ -0.5
NR1H3-235ENST00000616973 TWIST1Q15672 202 aa11.93□□□□□ -0.5
NR1H3-235ENST00000616973 PMCHL1Q16048 86 aa11.93□□□□□ -0.5
NR1H3-235ENST00000616973 SAMD13Q5VXD3 122 aa11.93□□□□□ -0.5
NR1H3-235ENST00000616973 AMN1Q8IY45 258 aa11.93□□□□□ -0.5
NR1H3-235ENST00000616973 OR10J6PQ8NGY7 276 aa11.93□□□□□ -0.5
NR1H3-235ENST00000616973 MYOZ3Q8TDC0 251 aa11.93□□□□□ -0.5
NR1H3-235ENST00000616973 ZNF702PQ9H963 129 aa11.93□□□□□ -0.5
NR1H3-235ENST00000616973 C11orf21Q9P2W6 132 aa11.93□□□□□ -0.5
NR1H3-235ENST00000616973 VPS13CQ709C8 3753 aa11.93□□□□□ -0.5
NR1H3-235ENST00000616973 FBN2P35556 2912 aa11.93□□□□□ -0.5
NR1H3-235ENST00000616973 ELANEP08246 267 aa11.92□□□□□ -0.5
NR1H3-235ENST00000616973 MRPL51Q4U2R6 128 aaKnown RBP11.92□□□□□ -0.5
NR1H3-235ENST00000616973 ORMDL3Q8N138 153 aa11.92□□□□□ -0.5
NR1H3-235ENST00000616973 KMT2BQ9UMN6 2715 aaPredicted RBP11.92□□□□□ -0.5
NR1H3-235ENST00000616973 CELSR1Q9NYQ6 3014 aa11.92□□□□□ -0.5
NR1H3-235ENST00000616973 TRBV7-9A0A0J9YWB2 115 aa11.92□□□□□ -0.5
NR1H3-235ENST00000616973 D6R8Y8 96 aa11.92□□□□□ -0.5
NR1H3-235ENST00000616973 LRRK2Q5S007 2527 aa11.91□□□□□ -0.5
NR1H3-235ENST00000616973 CRXO43186 299 aaPredicted RBP11.91□□□□□ -0.5
NR1H3-235ENST00000616973 LEPROTL1O95214 131 aa11.91□□□□□ -0.5
NR1H3-235ENST00000616973 FAM19A4Q96LR4 140 aa11.91□□□□□ -0.5
NR1H3-235ENST00000616973 PRELID3AQ96N28 172 aa11.91□□□□□ -0.5
NR1H3-235ENST00000616973 TMEM70Q9BUB7 260 aa11.91□□□□□ -0.5
NR1H3-235ENST00000616973 PAM16Q9Y3D7 125 aa11.91□□□□□ -0.5
NR1H3-235ENST00000616973 SVEP1Q4LDE5 3571 aa11.91□□□□□ -0.5
NR1H3-235ENST00000616973 RPL11P62913 178 aaKnown RBP11.9□□□□□ -0.5
NR1H3-235ENST00000616973 ZNF124Q15973 351 aa11.9□□□□□ -0.5
NR1H3-235ENST00000616973 C10orf99Q6UWK7 81 aa11.9□□□□□ -0.5
NR1H3-235ENST00000616973 RNF152Q8N8N0 203 aa11.9□□□□□ -0.5
NR1H3-235ENST00000616973 MIEN1Q9BRT3 115 aa11.9□□□□□ -0.5
NR1H3-235ENST00000616973 AP5S1Q9NUS5 200 aa11.9□□□□□ -0.5
NR1H3-235ENST00000616973 MUC21A0A0G2JKD1 596 aa11.9□□□□□ -0.51
NR1H3-235ENST00000616973 MUC21A0A140T8X8 626 aa11.9□□□□□ -0.51
NR1H3-235ENST00000616973 HOXA3O43365 443 aaPredicted RBP11.9□□□□□ -0.51
NR1H3-235ENST00000616973 RPLP1P05386 114 aaKnown RBP11.9□□□□□ -0.51
NR1H3-235ENST00000616973 CSN3P07498 182 aa11.9□□□□□ -0.51
NR1H3-235ENST00000616973 MUC21Q5SSG8 566 aa11.9□□□□□ -0.51
NR1H3-235ENST00000616973 ZFAND2AQ8N6M9 145 aa11.9□□□□□ -0.51
NR1H3-235ENST00000616973 PRSS3P2Q8NHM4 247 aa11.9□□□□□ -0.51
NR1H3-235ENST00000616973 PPBPP02775 128 aa11.89□□□□□ -0.51
NR1H3-235ENST00000616973 LGALS1P09382 135 aaKnown RBP11.89□□□□□ -0.51
NR1H3-235ENST00000616973 FA2HQ7L5A8 372 aa11.89□□□□□ -0.51
NR1H3-235ENST00000616973 APRG1Q8IVJ8 170 aa11.89□□□□□ -0.51
NR1H3-235ENST00000616973 Q8N2B8 174 aa11.89□□□□□ -0.51
NR1H3-235ENST00000616973 OR8A1Q8NGG7 326 aa11.89□□□□□ -0.51
NR1H3-235ENST00000616973 MSRB1Q9NZV6 116 aa11.89□□□□□ -0.51
NR1H3-235ENST00000616973 CELSR2Q9HCU4 2923 aa11.89□□□□□ -0.51
NR1H3-235ENST00000616973 IGHV4-4A0A075B6R2 117 aa11.88□□□□□ -0.51
NR1H3-235ENST00000616973 SNAI2O43623 268 aa11.88□□□□□ -0.51
NR1H3-235ENST00000616973 ID1P41134 155 aa11.88□□□□□ -0.51
NR1H3-235ENST00000616973 PRR9Q5T870 116 aa11.88□□□□□ -0.51
NR1H3-235ENST00000616973 RNF185Q96GF1 192 aa11.88□□□□□ -0.51
NR1H3-235ENST00000616973 UBE2E2Q96LR5 201 aa11.88□□□□□ -0.51
NR1H3-235ENST00000616973 HSPB8Q9UJY1 196 aa11.88□□□□□ -0.51
NR1H3-235ENST00000616973 SYS1-DBNDD2H3BUS1 97 aa11.88□□□□□ -0.51
NR1H3-235ENST00000616973 LGALS9O00182 355 aa11.88□□□□□ -0.51
NR1H3-235ENST00000616973 CKS2P33552 79 aa11.88□□□□□ -0.51
NR1H3-235ENST00000616973 SIGLEC8Q9NYZ4 499 aa11.88□□□□□ -0.51
NR1H3-235ENST00000616973 LAMTOR2Q9Y2Q5 125 aa11.88□□□□□ -0.51
NR1H3-235ENST00000616973 TRAV21A0A0B4J279 112 aa11.87□□□□□ -0.51
NR1H3-235ENST00000616973 CACNG7P62955 275 aa11.87□□□□□ -0.51
NR1H3-235ENST00000616973 SPATA45Q537H7 98 aa11.87□□□□□ -0.51
NR1H3-235ENST00000616973 MRPL52Q86TS9 123 aaKnown RBP11.87□□□□□ -0.51
NR1H3-235ENST00000616973 TEX29Q8N6K0 151 aa11.87□□□□□ -0.51
NR1H3-235ENST00000616973 DCANP1Q8TF63 244 aa11.87□□□□□ -0.51
NR1H3-235ENST00000616973 ZFHX3Q15911 3703 aa11.87□□□□□ -0.51
NR1H3-235ENST00000616973 C20orf202A1L168 122 aa11.86□□□□□ -0.51
NR1H3-235ENST00000616973 IFI27P40305 119 aaPredicted RBP11.86□□□□□ -0.51
NR1H3-235ENST00000616973 C2orf88Q9BSF0 95 aa11.86□□□□□ -0.51
NR1H3-235ENST00000616973 EDN2P20800 178 aa11.86□□□□□ -0.51
NR1H3-235ENST00000616973 PET117Q6UWS5 81 aa11.86□□□□□ -0.51
NR1H3-235ENST00000616973 LINC00173Q6ZV60 143 aa11.86□□□□□ -0.51
NR1H3-235ENST00000616973 OR10AG1Q8NH19 301 aa11.86□□□□□ -0.51
NR1H3-235ENST00000616973 MAP1LC3CQ9BXW4 147 aa11.86□□□□□ -0.51
NR1H3-235ENST00000616973 CSMD2Q7Z408 3487 aa11.85□□□□□ -0.51
NR1H3-235ENST00000616973 TRAV9-2A0A087WT02 112 aa11.85□□□□□ -0.51
NR1H3-235ENST00000616973 NPYP01303 97 aa11.85□□□□□ -0.51
NR1H3-235ENST00000616973 SPATA12Q7Z6I5 190 aa11.85□□□□□ -0.51
NR1H3-235ENST00000616973 KLHDC1Q8N7A1 406 aa11.85□□□□□ -0.51
NR1H3-235ENST00000616973 TCF21O43680 179 aa11.84□□□□□ -0.51
NR1H3-235ENST00000616973 Q6ZQT7 251 aa11.84□□□□□ -0.51
NR1H3-235ENST00000616973 TMEM86BQ8N661 226 aa11.84□□□□□ -0.51
NR1H3-235ENST00000616973 CENPEQ02224 2701 aa11.84□□□□□ -0.51
NR1H3-235ENST00000616973 IGKV3-7A0A075B6H7 116 aa11.84□□□□□ -0.51
NR1H3-235ENST00000616973 LINC01546A6NGU7 62 aa11.84□□□□□ -0.51
NR1H3-235ENST00000616973 F6UB75 175 aa11.84□□□□□ -0.51
NR1H3-235ENST00000616973 MED14OSP0DP75 135 aa11.84□□□□□ -0.51
NR1H3-235ENST00000616973 DEFB1P60022 68 aa11.84□□□□□ -0.51
NR1H3-235ENST00000616973 ZNF747Q9BV97 191 aa11.84□□□□□ -0.51
NR1H3-235ENST00000616973 NBPF19A0A087WUL8 3843 aa11.83□□□□□ -0.52
NR1H3-235ENST00000616973 USP9YO00507 2555 aaPredicted RBP11.83□□□□□ -0.52
NR1H3-235ENST00000616973 IGHV4OR15-8A0A075B7B6 117 aa11.83□□□□□ -0.52
NR1H3-235ENST00000616973 A0A087WW49 117 aa11.83□□□□□ -0.52
NR1H3-235ENST00000616973 LOC389332A0A1B0GUA5 103 aa11.83□□□□□ -0.52
NR1H3-235ENST00000616973 A0A1B0GV90 55 aa11.83□□□□□ -0.52
NR1H3-235ENST00000616973 ZNF705AQ6ZN79 300 aaPredicted RBP11.83□□□□□ -0.52
NR1H3-235ENST00000616973 SMIM15Q7Z3B0 74 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms