RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CYTL1Q9NRR1 136 aa10.13□□□□□ -0.79
TCF4-248ENST00000616053 TRBV20-1A0A075B6N2 111 aa10.12□□□□□ -0.79
TCF4-248ENST00000616053 BAALC-AS2P0C853 105 aa10.12□□□□□ -0.79
TCF4-248ENST00000616053 CD177Q8N6Q3 437 aa10.12□□□□□ -0.79
TCF4-248ENST00000616053 LINC00479Q96M42 142 aa10.12□□□□□ -0.79
TCF4-248ENST00000616053 FOXI2Q6ZQN5 318 aa10.12□□□□□ -0.79
TCF4-248ENST00000616053 SPTSSBQ8NFR3 76 aa10.12□□□□□ -0.79
TCF4-248ENST00000616053 AGMATQ9BSE5 352 aa10.12□□□□□ -0.79
TCF4-248ENST00000616053 C3orf22Q8N5N4 141 aa10.12□□□□□ -0.79
TCF4-248ENST00000616053 DOPEY1Q5JWR5 2465 aa10.12□□□□□ -0.79
TCF4-248ENST00000616053 NCR3O14931 201 aa10.12□□□□□ -0.79
TCF4-248ENST00000616053 PCNX3Q9H6A9 2034 aa10.12□□□□□ -0.79
TCF4-248ENST00000616053 PRSS33Q8NF86 280 aa10.11□□□□□ -0.79
TCF4-248ENST00000616053 KLK12Q9UKR0 248 aa10.11□□□□□ -0.79
TCF4-248ENST00000616053 SORL1Q92673 2214 aa10.11□□□□□ -0.79
TCF4-248ENST00000616053 TNRC6AQ8NDV7 1962 aaKnown RBP10.11□□□□□ -0.79
TCF4-248ENST00000616053 POU2AF1Q16633 256 aa10.11□□□□□ -0.79
TCF4-248ENST00000616053 CARD19Q96LW7 228 aa10.11□□□□□ -0.79
TCF4-248ENST00000616053 HS3ST6Q96QI5 342 aa10.11□□□□□ -0.79
TCF4-248ENST00000616053 PTPRDP23468 1912 aa10.11□□□□□ -0.79
TCF4-248ENST00000616053 ROS1P08922 2347 aa10.11□□□□□ -0.79
TCF4-248ENST00000616053 EXPH5Q8NEV8 1989 aa10.11□□□□□ -0.79
TCF4-248ENST00000616053 OPRPNQ99935 248 aaPredicted RBP10.11□□□□□ -0.79
TCF4-248ENST00000616053 HHLA3Q9XRX5 114 aa10.11□□□□□ -0.79
TCF4-248ENST00000616053 TMEM131Q92545 1883 aa10.11□□□□□ -0.79
TCF4-248ENST00000616053 IGHV7-4-1A0A0J9YVY3 117 aa10.1□□□□□ -0.79
TCF4-248ENST00000616053 SLURP1P55000 103 aa10.1□□□□□ -0.79
TCF4-248ENST00000616053 SPINK6Q6UWN8 80 aa10.1□□□□□ -0.79
TCF4-248ENST00000616053 DEFB125Q8N687 156 aa10.1□□□□□ -0.79
TCF4-248ENST00000616053 NOTCH4Q99466 2003 aa10.1□□□□□ -0.79
TCF4-248ENST00000616053 SHANK3Q9BYB0 1731 aa10.1□□□□□ -0.79
TCF4-248ENST00000616053 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.1□□□□□ -0.79
TCF4-248ENST00000616053 IGKV2-29A2NJV5 120 aaPredicted RBP10.1□□□□□ -0.79
TCF4-248ENST00000616053 H3BQ85 93 aa10.1□□□□□ -0.79
TCF4-248ENST00000616053 PDE6HQ13956 83 aa10.1□□□□□ -0.79
TCF4-248ENST00000616053 PYGO2Q9BRQ0 406 aa10.1□□□□□ -0.79
TCF4-248ENST00000616053 TSC2P49815 1807 aa10.1□□□□□ -0.79
TCF4-248ENST00000616053 A0A087X0K7 114 aa10.1□□□□□ -0.79
TCF4-248ENST00000616053 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.09□□□□□ -0.79
TCF4-248ENST00000616053 SPRY2O43597 315 aa10.09□□□□□ -0.79
TCF4-248ENST00000616053 SRSF2Q01130 221 aaKnown RBP10.09□□□□□ -0.79
TCF4-248ENST00000616053 TIAM2Q8IVF5 1701 aa10.09□□□□□ -0.79
TCF4-248ENST00000616053 ZFP2Q6ZN57 461 aa10.09□□□□□ -0.79
TCF4-248ENST00000616053 PLA2G1BP04054 148 aaKnown RBP10.09□□□□□ -0.79
TCF4-248ENST00000616053 IFI6P09912 130 aa10.09□□□□□ -0.79
TCF4-248ENST00000616053 TREML4Q6UXN2 200 aa10.09□□□□□ -0.79
TCF4-248ENST00000616053 Q0VG73 95 aa10.09□□□□□ -0.79
TCF4-248ENST00000616053 MRPS18AQ9NVS2 196 aaKnown RBP10.09□□□□□ -0.79
TCF4-248ENST00000616053 IGKV1D-43A0A0B4J1Z2 117 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 MST1P26927 711 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 NRAPQ86VF7 1730 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 C18orf12Q96KH6 178 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 NPDC1Q9NQX5 325 aaPredicted RBP10.08□□□□□ -0.8
TCF4-248ENST00000616053 SPANXA1Q9NS26 97 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 IGKV2D-26A0A0A0MRZ7 120 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 PLA2G10O15496 165 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 SHANK2-AS3Q9BTD1 123 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 Q9H8V8 135 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 KIR3DS1Q14943 382 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 C9orf85Q96MD7 179 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 UPK3BQ9BT76 320 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 LY96Q9Y6Y9 160 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 K7EQD1 137 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 IGLV3-21P80748 117 aaPredicted RBP10.08□□□□□ -0.8
TCF4-248ENST00000616053 C1orf194Q5T5A4 169 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 FAM19A1Q7Z5A9 133 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 SPANXDQ9BXN6 97 aa10.08□□□□□ -0.8
TCF4-248ENST00000616053 NUP35Q8NFH5 326 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 GREB1LQ9C091 1923 aaPredicted RBP10.07□□□□□ -0.8
TCF4-248ENST00000616053 TRAV26-2A0A0B4J265 109 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 LY6G6EA0A0G2JKS1 128 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 SMIM10L1P0DMW3 83 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 TEX36Q5VZQ5 186 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 BRK1Q8WUW1 75 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 SMIM10Q96HG1 83 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 IGLV2-18A0A075B6J9 118 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 ABCA3Q99758 1704 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 X6R8D5 127 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 CFPP27918 469 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 CUL9Q8IWT3 2517 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 CTHRC1Q96CG8 243 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 SS18L2Q9UHA2 77 aa10.07□□□□□ -0.8
TCF4-248ENST00000616053 TRAV3A0A0B4J244 114 aa10.06□□□□□ -0.8
TCF4-248ENST00000616053 IGKV1D-37A0A075B6S9 117 aa10.06□□□□□ -0.8
TCF4-248ENST00000616053 TRBV10-2A0A0K0K1G8 114 aa10.06□□□□□ -0.8
TCF4-248ENST00000616053 ADAMTSL5Q6ZMM2 481 aa10.06□□□□□ -0.8
TCF4-248ENST00000616053 DIRC1Q969H9 104 aa10.06□□□□□ -0.8
TCF4-248ENST00000616053 C5P01031 1676 aa10.06□□□□□ -0.8
TCF4-248ENST00000616053 NTN3O00634 580 aaPredicted RBP10.06□□□□□ -0.8
TCF4-248ENST00000616053 GREB1Q4ZG55 1949 aa10.06□□□□□ -0.8
TCF4-248ENST00000616053 CRYGDP07320 174 aa10.06□□□□□ -0.8
TCF4-248ENST00000616053 PLXNB2O15031 1838 aa10.05□□□□□ -0.8
TCF4-248ENST00000616053 IGKV1-9A0A0C4DH69 117 aa10.05□□□□□ -0.8
TCF4-248ENST00000616053 SPAG11BQ08648 103 aa10.05□□□□□ -0.8
TCF4-248ENST00000616053 ZNF492Q9P255 531 aa10.05□□□□□ -0.8
TCF4-248ENST00000616053 A0A1B0GUL6 1792 aa10.05□□□□□ -0.8
TCF4-248ENST00000616053 LINC01620Q4KN68 170 aa10.05□□□□□ -0.8
TCF4-248ENST00000616053 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.05□□□□□ -0.8
TCF4-248ENST00000616053 VWA8A3KMH1 1905 aa10.05□□□□□ -0.8
TCF4-248ENST00000616053 IFITM1P13164 125 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms