RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 C20orf78Q9BR46 151 aa14.99□□□□□ -0.01
SPAST-203ENST00000615843 BOD1L2Q8IYS8 172 aa14.99□□□□□ -0.01
SPAST-203ENST00000615843 KNCNA6PVL3 124 aa14.98□□□□□ -0.01
SPAST-203ENST00000615843 ATP6V0E1O15342 81 aa14.98□□□□□ -0.01
SPAST-203ENST00000615843 INSP01308 110 aa14.98□□□□□ -0.01
SPAST-203ENST00000615843 ANKRD29Q8N6D5 301 aa14.98□□□□□ -0.01
SPAST-203ENST00000615843 HELZP42694 1942 aaKnown RBP14.97□□□□□ -0.01
SPAST-203ENST00000615843 WDR81Q562E7 1941 aa14.97□□□□□ -0.01
SPAST-203ENST00000615843 CFC1BP0CG36 223 aa14.97□□□□□ -0.01
SPAST-203ENST00000615843 CFC1P0CG37 223 aa14.97□□□□□ -0.01
SPAST-203ENST00000615843 FOXI2Q6ZQN5 318 aa14.97□□□□□ -0.01
SPAST-203ENST00000615843 EP300Q09472 2414 aaPredicted RBP14.97□□□□□ -0.01
SPAST-203ENST00000615843 SAA4P35542 130 aa14.97□□□□□ -0.01
SPAST-203ENST00000615843 C17orf77Q96MU5 243 aa14.97□□□□□ -0.01
SPAST-203ENST00000615843 SHANK1Q9Y566 2161 aa14.97□□□□□ -0.01
SPAST-203ENST00000615843 CACNA1GO43497 2377 aa14.96□□□□□ -0.01
SPAST-203ENST00000615843 PRSS29PA6NIE9 313 aa14.96□□□□□ -0.01
SPAST-203ENST00000615843 LY6HO94772 140 aa14.96□□□□□ -0.01
SPAST-203ENST00000615843 TEX36Q5VZQ5 186 aa14.96□□□□□ -0.01
SPAST-203ENST00000615843 MSRB2Q9Y3D2 182 aa14.96□□□□□ -0.01
SPAST-203ENST00000615843 SPTBN2O15020 2390 aa14.96□□□□□ -0.01
SPAST-203ENST00000615843 DTX1Q86Y01 620 aa14.96□□□□□ -0.02
SPAST-203ENST00000615843 PIP4P2Q8N4L2 257 aa14.96□□□□□ -0.02
SPAST-203ENST00000615843 LOXP28300 417 aaPredicted RBP14.95□□□□□ -0.02
SPAST-203ENST00000615843 DOCK7Q96N67 2140 aa14.95□□□□□ -0.02
SPAST-203ENST00000615843 RHODO00212 210 aa14.95□□□□□ -0.02
SPAST-203ENST00000615843 EGR2P11161 476 aaPredicted RBP14.95□□□□□ -0.02
SPAST-203ENST00000615843 DIAPH2-AS1Q14236 149 aa14.95□□□□□ -0.02
SPAST-203ENST00000615843 C11orf44Q8N8P7 122 aa14.95□□□□□ -0.02
SPAST-203ENST00000615843 ZNF407Q9C0G0 2248 aa14.95□□□□□ -0.02
SPAST-203ENST00000615843 THADAQ6YHU6 1953 aa14.95□□□□□ -0.02
SPAST-203ENST00000615843 ZNF491Q8N8L2 437 aa14.95□□□□□ -0.02
SPAST-203ENST00000615843 IGF2BP2-AS1Q96M15 143 aa14.95□□□□□ -0.02
SPAST-203ENST00000615843 PLXNA2O75051 1894 aa14.95□□□□□ -0.02
SPAST-203ENST00000615843 NLRC5Q86WI3 1866 aa14.95□□□□□ -0.02
SPAST-203ENST00000615843 E7EQL1 145 aa14.94□□□□□ -0.02
SPAST-203ENST00000615843 UBE2E2Q96LR5 201 aa14.94□□□□□ -0.02
SPAST-203ENST00000615843 CHD3Q12873 2000 aaKnown RBP14.94□□□□□ -0.02
SPAST-203ENST00000615843 KLK9Q9UKQ9 250 aa14.94□□□□□ -0.02
SPAST-203ENST00000615843 MGAMO43451 1857 aa14.94□□□□□ -0.02
SPAST-203ENST00000615843 IGHG4P01861 327 aa14.94□□□□□ -0.02
SPAST-203ENST00000615843 SPINK13Q1W4C9 94 aa14.94□□□□□ -0.02
SPAST-203ENST00000615843 UBL5Q9BZL1 73 aa14.94□□□□□ -0.02
SPAST-203ENST00000615843 CMC4P56277 68 aaPredicted RBP14.93□□□□□ -0.02
SPAST-203ENST00000615843 INS-IGF2F8WCM5 200 aa14.93□□□□□ -0.02
SPAST-203ENST00000615843 WFDC2Q14508 124 aa14.92□□□□□ -0.02
SPAST-203ENST00000615843 G3V318 75 aa14.92□□□□□ -0.02
SPAST-203ENST00000615843 NCOR1O75376 2440 aa14.92□□□□□ -0.02
SPAST-203ENST00000615843 IGHV1OR15-1A0A075B7D0 117 aa14.92□□□□□ -0.02
SPAST-203ENST00000615843 FXYD2P54710 66 aa14.92□□□□□ -0.02
SPAST-203ENST00000615843 SS18Q15532 418 aa14.92□□□□□ -0.02
SPAST-203ENST00000615843 SHISA9B4DS77 424 aa14.91□□□□□ -0.02
SPAST-203ENST00000615843 FGF23Q9GZV9 251 aaPredicted RBP14.91□□□□□ -0.02
SPAST-203ENST00000615843 CRYBA4P53673 196 aa14.91□□□□□ -0.02
SPAST-203ENST00000615843 DEFB131AP59861 70 aa14.91□□□□□ -0.02
SPAST-203ENST00000615843 TMEM126AQ9H061 195 aa14.91□□□□□ -0.02
SPAST-203ENST00000615843 GATA1P15976 413 aaPredicted RBP14.91□□□□□ -0.02
SPAST-203ENST00000615843 PFN2P35080 140 aa14.9□□□□□ -0.02
SPAST-203ENST00000615843 ZNF493Q6ZR52 646 aa14.9□□□□□ -0.02
SPAST-203ENST00000615843 SMIM20Q8N5G0 67 aa14.9□□□□□ -0.02
SPAST-203ENST00000615843 SYNJ2BPP57105 145 aa14.9□□□□□ -0.02
SPAST-203ENST00000615843 Q6ZSR3 168 aa14.9□□□□□ -0.02
SPAST-203ENST00000615843 CREBBPQ92793 2442 aa14.9□□□□□ -0.02
SPAST-203ENST00000615843 ARFGEF3Q5TH69 2177 aa14.9□□□□□ -0.02
SPAST-203ENST00000615843 K7EMI3 77 aa14.89□□□□□ -0.03
SPAST-203ENST00000615843 FRMD6-AS1P0C7T7 363 aa14.89□□□□□ -0.03
SPAST-203ENST00000615843 FNDC1Q4ZHG4 1894 aaPredicted RBP14.89□□□□□ -0.03
SPAST-203ENST00000615843 COL4A6Q14031 1691 aa14.89□□□□□ -0.03
SPAST-203ENST00000615843 IGHV3-16A0A0C4DH30 117 aa14.89□□□□□ -0.03
SPAST-203ENST00000615843 G3V4G9 280 aa14.89□□□□□ -0.03
SPAST-203ENST00000615843 DYNAPQ8N1N2 210 aa14.89□□□□□ -0.03
SPAST-203ENST00000615843 IGLV1-44P01699 117 aa14.89□□□□□ -0.03
SPAST-203ENST00000615843 CFHR4Q92496 578 aa14.89□□□□□ -0.03
SPAST-203ENST00000615843 CACNA1HO95180 2353 aa14.88□□□□□ -0.03
SPAST-203ENST00000615843 IGLV3-9A0A075B6K5 115 aa14.88□□□□□ -0.03
SPAST-203ENST00000615843 Q6ZS92 163 aa14.88□□□□□ -0.03
SPAST-203ENST00000615843 SPTAN1Q13813 2472 aaKnown RBP14.88□□□□□ -0.03
SPAST-203ENST00000615843 HAMPP81172 84 aa14.88□□□□□ -0.03
SPAST-203ENST00000615843 GP9P14770 177 aa14.88□□□□□ -0.03
SPAST-203ENST00000615843 TEN1Q86WV5 123 aa14.88□□□□□ -0.03
SPAST-203ENST00000615843 HIGD1BQ9P298 99 aa14.88□□□□□ -0.03
SPAST-203ENST00000615843 UBE2E1P51965 193 aa14.88□□□□□ -0.03
SPAST-203ENST00000615843 SPANXCQ9NY87 97 aa14.87□□□□□ -0.03
SPAST-203ENST00000615843 RPL35AP18077 110 aaKnown RBP14.87□□□□□ -0.03
SPAST-203ENST00000615843 C11orf53Q8IXP5 236 aa14.87□□□□□ -0.03
SPAST-203ENST00000615843 NOTCH3Q9UM47 2321 aa14.87□□□□□ -0.03
SPAST-203ENST00000615843 IGHV3-38A0A0C4DH36 116 aa14.87□□□□□ -0.03
SPAST-203ENST00000615843 GTSF1Q8WW33 167 aa14.87□□□□□ -0.03
SPAST-203ENST00000615843 TRAV13-2A0A0B4J235 113 aa14.86□□□□□ -0.03
SPAST-203ENST00000615843 AGPAT4-IT1Q9H0P7 198 aa14.86□□□□□ -0.03
SPAST-203ENST00000615843 TRAV12-2A0A075B6T6 113 aa14.86□□□□□ -0.03
SPAST-203ENST00000615843 TTTY13Q9BZ97 58 aa14.86□□□□□ -0.03
SPAST-203ENST00000615843 NDUFA4O00483 81 aa14.86□□□□□ -0.03
SPAST-203ENST00000615843 PATE2Q6UY27 113 aa14.86□□□□□ -0.03
SPAST-203ENST00000615843 C11orf1Q9H5F2 150 aa14.86□□□□□ -0.03
SPAST-203ENST00000615843 B4DSR2 109 aa14.85□□□□□ -0.03
SPAST-203ENST00000615843 BPESC1Q9GZL8 116 aa14.85□□□□□ -0.03
SPAST-203ENST00000615843 RS1O15537 224 aa14.84□□□□□ -0.03
SPAST-203ENST00000615843 FOXE3Q13461 319 aa14.84□□□□□ -0.03
SPAST-203ENST00000615843 DENND4AQ7Z401 1863 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms