RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 PRB4P10163 310 aaPredicted RBP8.08□□□□□ -1.12
COL4A1-205ENST00000615732 COX19Q49B96 90 aa8.08□□□□□ -1.12
COL4A1-205ENST00000615732 SAPCD1Q5SSQ6 148 aa8.08□□□□□ -1.12
COL4A1-205ENST00000615732 SAMD13Q5VXD3 122 aa8.08□□□□□ -1.12
COL4A1-205ENST00000615732 SBSPONQ8IVN8 264 aa8.08□□□□□ -1.12
COL4A1-205ENST00000615732 RNF182Q8N6D2 247 aa8.08□□□□□ -1.12
COL4A1-205ENST00000615732 ZNF738Q8NE65 137 aa8.08□□□□□ -1.12
COL4A1-205ENST00000615732 TRAPPC1Q9Y5R8 145 aa8.08□□□□□ -1.12
COL4A1-205ENST00000615732 PLECQ15149 4684 aaKnown RBP8.07□□□□□ -1.12
COL4A1-205ENST00000615732 TRAV8-2A0A0B4J237 113 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 RBAKDNA6NC62 111 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 C19orf71A6NCJ1 209 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 A8MWL6 223 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 OVOL1O14753 267 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 CA1P00915 261 aaPredicted RBP8.07□□□□□ -1.12
COL4A1-205ENST00000615732 SYNJ2BPP57105 145 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 CT83Q5H943 113 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 WDR73Q6P4I2 378 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 TCF24Q7RTU0 167 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 TSKUQ8WUA8 353 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 FRZBQ92765 325 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 DLX4Q92988 240 aaPredicted RBP8.07□□□□□ -1.12
COL4A1-205ENST00000615732 ZC2HC1AQ96GY0 325 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 C8orf49Q96NF6 230 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 NRN1Q9NPD7 142 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 NAT8BQ9UHF3 227 aa8.07□□□□□ -1.12
COL4A1-205ENST00000615732 LCE6AA0A183 80 aa8.06□□□□□ -1.12
COL4A1-205ENST00000615732 LINC01619G3V211 115 aa8.06□□□□□ -1.12
COL4A1-205ENST00000615732 LGALS9O00182 355 aa8.06□□□□□ -1.12
COL4A1-205ENST00000615732 FRMD6-AS1P0C7T7 363 aa8.06□□□□□ -1.12
COL4A1-205ENST00000615732 ID1P41134 155 aa8.06□□□□□ -1.12
COL4A1-205ENST00000615732 NDUFA6P56556 154 aa8.06□□□□□ -1.12
COL4A1-205ENST00000615732 ACTL10Q5JWF8 245 aa8.06□□□□□ -1.12
COL4A1-205ENST00000615732 TMEM78Q5T7P6 136 aa8.06□□□□□ -1.12
COL4A1-205ENST00000615732 OR2D3Q8NGH3 330 aa8.06□□□□□ -1.12
COL4A1-205ENST00000615732 Q8TAT8 98 aa8.06□□□□□ -1.12
COL4A1-205ENST00000615732 VGLL1Q99990 258 aa8.06□□□□□ -1.12
COL4A1-205ENST00000615732 IGKV3-7A0A075B6H7 116 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 TMEM213A2RRL7 107 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 A8MWP6 167 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 SNURFLB1AK76 121 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 PRAC2D3DTV9 90 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 SPINK4O60575 86 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 TRGC1P0CF51 173 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 INSL3P51460 131 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 RAB4BP61018 213 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 SNRPEP62304 92 aaKnown RBP8.05□□□□□ -1.12
COL4A1-205ENST00000615732 FABP9Q0Z7S8 132 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 ERCC8Q13216 396 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 SMUG1Q53HV7 270 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 FAM162BQ5T6X4 162 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 ZFAND6Q6FIF0 208 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 MRPL54Q6P161 138 aaKnown RBP8.05□□□□□ -1.12
COL4A1-205ENST00000615732 LINC00322Q6ZN03 302 aaPredicted RBP8.05□□□□□ -1.12
COL4A1-205ENST00000615732 OR10J6PQ8NGY7 276 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 NEU1Q99519 415 aa8.05□□□□□ -1.12
COL4A1-205ENST00000615732 XKRY2A2RUG3 117 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 HIGD1CA8MV81 97 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 HIST1H2BKO60814 126 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 SH2D1AO60880 128 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 MT-ND6P03923 174 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 HIST1H2BJP06899 126 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 CBLN1P23435 193 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 HIST1H2BOP23527 126 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 HIST1H2BBP33778 126 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 HIST1H2BDP58876 126 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 HIST1H2BCP62807 126 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 HIST2H2BEQ16778 126 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.04□□□□□ -1.12
COL4A1-205ENST00000615732 HIST1H2BHQ93079 126 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 HIST1H2BNQ99877 126 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 HIST1H2BMQ99879 126 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 GFRA4Q9GZZ7 299 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 MRPL18Q9H0U6 180 aaKnown RBP8.04□□□□□ -1.12
COL4A1-205ENST00000615732 PEMTQ9UBM1 199 aa8.04□□□□□ -1.12
COL4A1-205ENST00000615732 TMEM189A5PLL7 270 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 C2orf70A6NJV1 201 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 NPIPB6E9PJ23 425 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 SOCS3O14543 225 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 EDN2P20800 178 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 AKR1D1P51857 326 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 ZNF138P52744 262 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 RPS20P60866 119 aaKnown RBP8.03□□□□□ -1.12
COL4A1-205ENST00000615732 RASL11AQ6T310 242 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 ATP5L2Q7Z4Y8 100 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 WFDC3Q8IUB2 231 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 NUP35Q8NFH5 326 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 BORCS7Q96B45 105 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 PGLYRP4Q96LB8 373 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 C20orf173Q96LM9 149 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 SELENOKQ9Y6D0 94 aa8.03□□□□□ -1.12
COL4A1-205ENST00000615732 FAM231BA6NCW3 169 aa8.02□□□□□ -1.13
COL4A1-205ENST00000615732 C5orf52A6NGY3 159 aa8.02□□□□□ -1.13
COL4A1-205ENST00000615732 PHOX2AO14813 284 aa8.02□□□□□ -1.13
COL4A1-205ENST00000615732 HLA-DQA1P01909 254 aa8.02□□□□□ -1.13
COL4A1-205ENST00000615732 HIST1H1AQ02539 215 aaPredicted RBP8.02□□□□□ -1.13
COL4A1-205ENST00000615732 KLF5Q13887 457 aaPredicted RBP8.02□□□□□ -1.13
COL4A1-205ENST00000615732 Q6AWC8 147 aa8.02□□□□□ -1.13
COL4A1-205ENST00000615732 RBPMS2Q6ZRY4 209 aaKnown RBP8.02□□□□□ -1.13
COL4A1-205ENST00000615732 C9orf47Q6ZRZ4 202 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms