RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 SMIM2Q9BVW6 85 aa3.65□□□□□ -1.83
CHD9-221ENST00000615216 SIGLEC8Q9NYZ4 499 aa3.65□□□□□ -1.83
CHD9-221ENST00000615216 KAAG1Q9UBP8 84 aa3.65□□□□□ -1.83
CHD9-221ENST00000615216 PCNX3Q9H6A9 2034 aa3.65□□□□□ -1.83
CHD9-221ENST00000615216 F8VRH5 84 aa3.65□□□□□ -1.83
CHD9-221ENST00000615216 VWC2Q2TAL6 325 aa3.65□□□□□ -1.83
CHD9-221ENST00000615216 FOXI2Q6ZQN5 318 aa3.65□□□□□ -1.83
CHD9-221ENST00000615216 C11orf44Q8N8P7 122 aa3.65□□□□□ -1.83
CHD9-221ENST00000615216 LENEPQ9Y5L5 61 aa3.65□□□□□ -1.83
CHD9-221ENST00000615216 TNRC6BQ9UPQ9 1833 aaKnown RBP3.65□□□□□ -1.83
CHD9-221ENST00000615216 PRSS47A8MTI9 375 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 EREGO14944 169 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 SLAQ13239 276 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 POU2AF1Q16633 256 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 ZC2HC1AQ96GY0 325 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 UBL5Q9BZL1 73 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 IGFL4Q6B9Z1 124 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 ZNF493Q6ZR52 646 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 LINC00479Q96M42 142 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 SDHAF1A6NFY7 115 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 HOXB4P17483 251 aaPredicted RBP3.64□□□□□ -1.83
CHD9-221ENST00000615216 RUSC1-AS1Q66K80 236 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 Q6ZWC4 215 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 CYYR1Q96J86 154 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 NAA38Q9BRA0 125 aaKnown RBP3.64□□□□□ -1.83
CHD9-221ENST00000615216 A0A1W2PPM0 123 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 IFITM1P13164 125 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 C9orf153Q5TBE3 101 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 VOPP1Q96AW1 172 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 C1orf147Q96MC9 270 aaPredicted RBP3.64□□□□□ -1.83
CHD9-221ENST00000615216 LY6G6EA0A0G2JKS1 128 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 U3KQA8 63 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 LOXP28300 417 aaPredicted RBP3.64□□□□□ -1.83
CHD9-221ENST00000615216 SPINK13Q1W4C9 94 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 WDR86Q86TI4 376 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 PRO1854Q9UHT4 67 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 TEX48A0A1B0GUV7 120 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 DEFB130BP0DP73 79 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 DEFB130AP0DP74 79 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 ZNF726P1Q15940 193 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 F5H768 121 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 ELANEP08246 267 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 USF3Q68DE3 2245 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 FREM1Q5H8C1 2179 aa3.64□□□□□ -1.83
CHD9-221ENST00000615216 IGLV3-9A0A075B6K5 115 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 IGHV2-5P01817 119 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 KLK9Q9UKQ9 250 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 CPAMD8Q8IZJ3 1885 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 PROK2Q9HC23 129 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 NDUFA12Q9UI09 145 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 IGLC2P0DOY2 106 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 IGLC3P0DOY3 106 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 LINC00205P59089 165 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 TCTEX1D4Q5JR98 221 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 LYPD6BQ8NI32 183 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 IGHV2-70P01814 119 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 SPTAN1Q13813 2472 aaKnown RBP3.63□□□□□ -1.83
CHD9-221ENST00000615216 C3orf56Q8N813 242 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 GAGE12JA6NER3 117 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 TRACP01848 142 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 HERV-K104P63124 156 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 GAGE4Q13068 117 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 GAGE5Q13069 117 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 KRTAP27-1Q3LI81 207 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 ANXA2RQ3ZCQ2 193 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 PRSS57Q6UWY2 283 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 Q6ZR03 302 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 C5orf24Q7Z6I8 188 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 EP300Q09472 2414 aaPredicted RBP3.63□□□□□ -1.83
CHD9-221ENST00000615216 GVINP1Q7Z2Y8 2422 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 C9JQL5 133 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 IGLC1P0CG04 106 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 WT1-ASQ06250 92 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 FOXE3Q13461 319 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 BVES-AS1Q5T3Y7 98 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 DOPEY2Q9Y3R5 2298 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 IGKV1-39P01597 117 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 IGKV1D-39P04432 117 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 PRB4P10163 310 aaPredicted RBP3.63□□□□□ -1.83
CHD9-221ENST00000615216 FGF6P10767 208 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 SH2D6Q7Z4S9 175 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 Q8NFD4 153 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 TMEM126AQ9H061 195 aa3.63□□□□□ -1.83
CHD9-221ENST00000615216 RNF223E7ERA6 249 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 J3QQQ9 107 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 CRLF1O75462 422 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 SUMO4Q6EEV6 95 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 XCL2Q9UBD3 114 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 TSSC4Q9Y5U2 329 aaPredicted RBP3.62□□□□□ -1.83
CHD9-221ENST00000615216 PCDH15Q96QU1 1955 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 MLANAQ16655 118 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 NPBQ8NG41 125 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 IGFBPL1Q8WX77 278 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 ABCA4P78363 2273 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 TRAV26-2A0A0B4J265 109 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 SHISA9B4DS77 424 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 ACYP1P07311 99 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 PRR31Q5SQ13 230 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 NDUFS7O75251 213 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 DEFB121Q5J5C9 76 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms