RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 MGAQ8IWI9 3026 aa9.8□□□□□ -0.84
MSH6-213ENST00000614496 M0R1W7 72 aa9.8□□□□□ -0.84
MSH6-213ENST00000614496 SAA4P35542 130 aa9.8□□□□□ -0.84
MSH6-213ENST00000614496 PSMB2P49721 201 aa9.8□□□□□ -0.84
MSH6-213ENST00000614496 ZNF80P51504 273 aaPredicted RBP9.8□□□□□ -0.84
MSH6-213ENST00000614496 HERVK_113P61574 105 aa9.8□□□□□ -0.84
MSH6-213ENST00000614496 BRD3OSQ6XYD6 125 aa9.8□□□□□ -0.84
MSH6-213ENST00000614496 MRPL16Q9NX20 251 aaKnown RBP9.8□□□□□ -0.84
MSH6-213ENST00000614496 A0A1B0GWB2 263 aa9.8□□□□□ -0.84
MSH6-213ENST00000614496 TMEM170BQ5T4T1 132 aa9.8□□□□□ -0.84
MSH6-213ENST00000614496 MRPL35Q9NZE8 188 aaKnown RBP9.8□□□□□ -0.84
MSH6-213ENST00000614496 OR5A1Q8NGJ0 315 aa9.8□□□□□ -0.84
MSH6-213ENST00000614496 ZNF418Q8TF45 676 aaPredicted RBP9.8□□□□□ -0.84
MSH6-213ENST00000614496 SORL1Q92673 2214 aa9.79□□□□□ -0.84
MSH6-213ENST00000614496 CD300EQ496F6 205 aaPredicted RBP9.79□□□□□ -0.84
MSH6-213ENST00000614496 FANCD2OSQ96PS1 177 aa9.79□□□□□ -0.84
MSH6-213ENST00000614496 IGLV11-55A0A075B6I3 123 aa9.79□□□□□ -0.84
MSH6-213ENST00000614496 CTSGP08311 255 aa9.79□□□□□ -0.84
MSH6-213ENST00000614496 PAX8Q06710 450 aa9.79□□□□□ -0.84
MSH6-213ENST00000614496 CFHR4Q92496 578 aa9.79□□□□□ -0.84
MSH6-213ENST00000614496 NCOR2Q9Y618 2525 aa9.79□□□□□ -0.84
MSH6-213ENST00000614496 CHTOPQ9Y3Y2 248 aaKnown RBP9.79□□□□□ -0.84
MSH6-213ENST00000614496 COL6A3P12111 3177 aa9.79□□□□□ -0.84
MSH6-213ENST00000614496 NPIPB6E9PJ23 425 aa9.78□□□□□ -0.84
MSH6-213ENST00000614496 CRYGBP07316 175 aa9.78□□□□□ -0.84
MSH6-213ENST00000614496 SMAGPQ0VAQ4 97 aa9.78□□□□□ -0.84
MSH6-213ENST00000614496 Q8NA96 180 aa9.78□□□□□ -0.84
MSH6-213ENST00000614496 AGPAT4-IT1Q9H0P7 198 aa9.78□□□□□ -0.84
MSH6-213ENST00000614496 FAM159AQ6UWV7 190 aa9.78□□□□□ -0.84
MSH6-213ENST00000614496 ZNF256Q9Y2P7 627 aaPredicted RBP9.78□□□□□ -0.84
MSH6-213ENST00000614496 FSTL3O95633 263 aa9.78□□□□□ -0.84
MSH6-213ENST00000614496 RBX1P62877 108 aa9.78□□□□□ -0.84
MSH6-213ENST00000614496 FOXE3Q13461 319 aa9.78□□□□□ -0.84
MSH6-213ENST00000614496 KLRB1Q12918 225 aa9.78□□□□□ -0.84
MSH6-213ENST00000614496 GTSF1LQ9H1H1 148 aa9.78□□□□□ -0.84
MSH6-213ENST00000614496 FAM208BQ5VWN6 2430 aa9.77□□□□□ -0.84
MSH6-213ENST00000614496 WI2-2373I1.2A0A1W2PRP0 233 aa9.77□□□□□ -0.85
MSH6-213ENST00000614496 K7EP34 96 aa9.77□□□□□ -0.85
MSH6-213ENST00000614496 CRXO43186 299 aaPredicted RBP9.77□□□□□ -0.85
MSH6-213ENST00000614496 MINOS1Q5TGZ0 78 aa9.77□□□□□ -0.85
MSH6-213ENST00000614496 MINOS1-NBL1R4GNA1 71 aa9.77□□□□□ -0.85
MSH6-213ENST00000614496 PTPRBP23467 1997 aa9.77□□□□□ -0.85
MSH6-213ENST00000614496 A0A1W2PPM0 123 aa9.77□□□□□ -0.85
MSH6-213ENST00000614496 ZNF815PA8K554 130 aa9.77□□□□□ -0.85
MSH6-213ENST00000614496 PAX2Q02962 417 aa9.77□□□□□ -0.85
MSH6-213ENST00000614496 C8orf86Q6ZUL3 223 aa9.77□□□□□ -0.85
MSH6-213ENST00000614496 BPESC1Q9GZL8 116 aa9.77□□□□□ -0.85
MSH6-213ENST00000614496 TRAV41A0A0B4J266 112 aa9.76□□□□□ -0.85
MSH6-213ENST00000614496 ZNF56Q15929 161 aa9.76□□□□□ -0.85
MSH6-213ENST00000614496 AMTNQ6UX39 209 aa9.76□□□□□ -0.85
MSH6-213ENST00000614496 NEGR1Q7Z3B1 354 aa9.76□□□□□ -0.85
MSH6-213ENST00000614496 IGHV7-81A0A0B4J1V7 117 aa9.76□□□□□ -0.85
MSH6-213ENST00000614496 TMEM238LA0A1B0GVL6 79 aa9.76□□□□□ -0.85
MSH6-213ENST00000614496 A6NJY4 79 aa9.76□□□□□ -0.85
MSH6-213ENST00000614496 ADAMTSL5Q6ZMM2 481 aa9.76□□□□□ -0.85
MSH6-213ENST00000614496 TRAV21A0A0B4J279 112 aa9.76□□□□□ -0.85
MSH6-213ENST00000614496 SMPXQ9UHP9 88 aa9.76□□□□□ -0.85
MSH6-213ENST00000614496 FXYD2P54710 66 aa9.75□□□□□ -0.85
MSH6-213ENST00000614496 DEFB1P60022 68 aa9.75□□□□□ -0.85
MSH6-213ENST00000614496 LY6DQ14210 128 aa9.75□□□□□ -0.85
MSH6-213ENST00000614496 SAMD13Q5VXD3 122 aa9.75□□□□□ -0.85
MSH6-213ENST00000614496 Q8N8P6 123 aa9.75□□□□□ -0.85
MSH6-213ENST00000614496 OR11H6Q8NGC7 330 aa9.75□□□□□ -0.85
MSH6-213ENST00000614496 KIR2DL4Q99706 377 aa9.75□□□□□ -0.85
MSH6-213ENST00000614496 ACACBO00763 2458 aa9.75□□□□□ -0.85
MSH6-213ENST00000614496 CIDEAO60543 219 aa9.75□□□□□ -0.85
MSH6-213ENST00000614496 FAM110DQ8TAY7 271 aaPredicted RBP9.75□□□□□ -0.85
MSH6-213ENST00000614496 OOSP1A8MZH6 123 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 CD7P09564 240 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 BOD1L2Q8IYS8 172 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 CACNA1AO00555 2505 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 GAS8-AS1O95177 125 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 ORMDL2Q53FV1 153 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 ID1P41134 155 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 TRBV25-1A0A075B6N4 114 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 IGHV3-64A0A075B6Q5 118 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 NPFFO15130 113 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 PRSS2P07478 247 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 ETDBQ3ZM63 59 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 PSMG4Q5JS54 123 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 NPBQ8NG41 125 aa9.74□□□□□ -0.85
MSH6-213ENST00000614496 F6UB75 175 aa9.73□□□□□ -0.85
MSH6-213ENST00000614496 HOXA3O43365 443 aaPredicted RBP9.73□□□□□ -0.85
MSH6-213ENST00000614496 C2orf91Q6ZV80 131 aa9.73□□□□□ -0.85
MSH6-213ENST00000614496 BEX4Q9NWD9 120 aaPredicted RBP9.73□□□□□ -0.85
MSH6-213ENST00000614496 H7C1H1 209 aa9.73□□□□□ -0.85
MSH6-213ENST00000614496 K7ENP7 123 aa9.73□□□□□ -0.85
MSH6-213ENST00000614496 TMEM190Q8WZ59 177 aa9.73□□□□□ -0.85
MSH6-213ENST00000614496 DPF1Q92782 380 aa9.73□□□□□ -0.85
MSH6-213ENST00000614496 A0A087WWL8 130 aa9.73□□□□□ -0.85
MSH6-213ENST00000614496 MRGPRG-AS1Q2M3A8 158 aa9.73□□□□□ -0.85
MSH6-213ENST00000614496 GAGE13Q4V321 117 aa9.73□□□□□ -0.85
MSH6-213ENST00000614496 ZNF493Q6ZR52 646 aa9.73□□□□□ -0.85
MSH6-213ENST00000614496 CSTL1Q9H114 145 aa9.73□□□□□ -0.85
MSH6-213ENST00000614496 H3BMG7 143 aa9.72□□□□□ -0.85
MSH6-213ENST00000614496 LGALS3P17931 250 aaKnown RBP9.72□□□□□ -0.85
MSH6-213ENST00000614496 WDFY3Q8IZQ1 3526 aa9.72□□□□□ -0.85
MSH6-213ENST00000614496 BOD1L1Q8NFC6 3051 aa9.72□□□□□ -0.85
MSH6-213ENST00000614496 BUB3O43684 328 aa9.72□□□□□ -0.85
MSH6-213ENST00000614496 LYRM7Q5U5X0 104 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms