RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 SMIM12Q96EX1 92 aa10.74□□□□□ -0.69
CD48-203ENST00000613788 SMIM7Q9BQ49 75 aa10.74□□□□□ -0.69
CD48-203ENST00000613788 C20orf144Q9BQM9 153 aa10.74□□□□□ -0.69
CD48-203ENST00000613788 C7orf71A4D174 169 aa10.74□□□□□ -0.69
CD48-203ENST00000613788 ZNF727A8MUV8 499 aa10.74□□□□□ -0.69
CD48-203ENST00000613788 C9JCJ5 164 aa10.74□□□□□ -0.69
CD48-203ENST00000613788 CRXO43186 299 aaPredicted RBP10.74□□□□□ -0.69
CD48-203ENST00000613788 CENPWQ5EE01 88 aa10.74□□□□□ -0.69
CD48-203ENST00000613788 SOHLH1Q5JUK2 328 aa10.74□□□□□ -0.69
CD48-203ENST00000613788 GFI1BQ5VTD9 330 aa10.74□□□□□ -0.69
CD48-203ENST00000613788 COX8CQ7Z4L0 72 aa10.74□□□□□ -0.69
CD48-203ENST00000613788 C8orf49Q96NF6 230 aa10.74□□□□□ -0.69
CD48-203ENST00000613788 TRAV12-3A0A0B4J271 114 aa10.73□□□□□ -0.69
CD48-203ENST00000613788 GCGP01275 180 aa10.73□□□□□ -0.69
CD48-203ENST00000613788 KIR3DS1Q14943 382 aa10.73□□□□□ -0.69
CD48-203ENST00000613788 CSNK1G2-AS1Q8NCQ2 148 aa10.73□□□□□ -0.69
CD48-203ENST00000613788 NIPSNAP3BQ9BS92 247 aa10.73□□□□□ -0.69
CD48-203ENST00000613788 MLST8Q9BVC4 326 aa10.73□□□□□ -0.69
CD48-203ENST00000613788 GOLT1BQ9Y3E0 138 aa10.73□□□□□ -0.69
CD48-203ENST00000613788 SFTA3P0C7M3 94 aa10.72□□□□□ -0.69
CD48-203ENST00000613788 BTN1A1Q13410 526 aa10.72□□□□□ -0.69
CD48-203ENST00000613788 SBSPONQ8IVN8 264 aa10.72□□□□□ -0.69
CD48-203ENST00000613788 TMEM256Q8N2U0 113 aa10.72□□□□□ -0.69
CD48-203ENST00000613788 RCHY1Q96PM5 261 aa10.72□□□□□ -0.69
CD48-203ENST00000613788 B9D2Q9BPU9 175 aa10.72□□□□□ -0.69
CD48-203ENST00000613788 TMEM208Q9BTX3 173 aa10.72□□□□□ -0.69
CD48-203ENST00000613788 TRBV20OR9-2A0A075B6H5 130 aa10.71□□□□□ -0.69
CD48-203ENST00000613788 TRAV21A0A0B4J279 112 aa10.71□□□□□ -0.69
CD48-203ENST00000613788 FABP5P3A8MUU1 101 aa10.71□□□□□ -0.69
CD48-203ENST00000613788 ZNF324O75467 553 aaPredicted RBP10.71□□□□□ -0.69
CD48-203ENST00000613788 DEFB135Q30KP9 77 aa10.71□□□□□ -0.69
CD48-203ENST00000613788 PRR9Q5T870 116 aa10.71□□□□□ -0.69
CD48-203ENST00000613788 Q6AWC8 147 aa10.71□□□□□ -0.69
CD48-203ENST00000613788 NHLRC2Q8NBF2 726 aa10.71□□□□□ -0.69
CD48-203ENST00000613788 RNF183Q96D59 192 aa10.71□□□□□ -0.69
CD48-203ENST00000613788 ZC2HC1AQ96GY0 325 aa10.71□□□□□ -0.69
CD48-203ENST00000613788 BIN3Q9NQY0 253 aa10.71□□□□□ -0.69
CD48-203ENST00000613788 TP53TG1Q9Y2A0 90 aa10.71□□□□□ -0.69
CD48-203ENST00000613788 LY96Q9Y6Y9 160 aa10.71□□□□□ -0.69
CD48-203ENST00000613788 H7BYZ3 331 aa10.7□□□□□ -0.7
CD48-203ENST00000613788 SPRY2O43597 315 aa10.7□□□□□ -0.7
CD48-203ENST00000613788 PFN1P07737 140 aaKnown RBP10.7□□□□□ -0.7
CD48-203ENST00000613788 MGST1P10620 155 aaKnown RBP10.7□□□□□ -0.7
CD48-203ENST00000613788 NDUFA5Q16718 116 aa10.7□□□□□ -0.7
CD48-203ENST00000613788 TMEM241Q24JQ0 296 aa10.7□□□□□ -0.7
CD48-203ENST00000613788 C1orf158Q8N1D5 194 aa10.7□□□□□ -0.7
CD48-203ENST00000613788 LINC01587Q99440 93 aa10.7□□□□□ -0.7
CD48-203ENST00000613788 IGHV3OR16-12A0A075B7B8 117 aa10.69□□□□□ -0.7
CD48-203ENST00000613788 IGLV2-8P01709 118 aa10.69□□□□□ -0.7
CD48-203ENST00000613788 ZNF80P51504 273 aaPredicted RBP10.69□□□□□ -0.7
CD48-203ENST00000613788 FAM162BQ5T6X4 162 aa10.69□□□□□ -0.7
CD48-203ENST00000613788 ZNF705AQ6ZN79 300 aaPredicted RBP10.69□□□□□ -0.7
CD48-203ENST00000613788 OCC1Q8TAD7 63 aa10.69□□□□□ -0.7
CD48-203ENST00000613788 TMEM218A2RU14 115 aa10.68□□□□□ -0.7
CD48-203ENST00000613788 PGPEP1LA6NFU8 196 aa10.68□□□□□ -0.7
CD48-203ENST00000613788 RBMY1A1P0DJD3 496 aaKnown RBP10.68□□□□□ -0.7
CD48-203ENST00000613788 RBMY1CP0DJD4 496 aa10.68□□□□□ -0.7
CD48-203ENST00000613788 RBMY1FQ15415 496 aaKnown RBP10.68□□□□□ -0.7
CD48-203ENST00000613788 SPATA25Q9BR10 227 aa10.68□□□□□ -0.7
CD48-203ENST00000613788 TM2D3Q9BRN9 247 aa10.68□□□□□ -0.7
CD48-203ENST00000613788 PYGO2Q9BRQ0 406 aa10.68□□□□□ -0.7
CD48-203ENST00000613788 ZMAT4Q9H898 229 aa10.68□□□□□ -0.7
CD48-203ENST00000613788 NAT8Q9UHE5 227 aa10.68□□□□□ -0.7
CD48-203ENST00000613788 CRIP1P50238 77 aa10.68□□□□□ -0.7
CD48-203ENST00000613788 PRR27Q6MZM9 219 aa10.68□□□□□ -0.7
CD48-203ENST00000613788 FAM159AQ6UWV7 190 aa10.68□□□□□ -0.7
CD48-203ENST00000613788 DAZAP1Q96EP5 407 aaKnown RBP10.68□□□□□ -0.7
CD48-203ENST00000613788 OVOL2Q9BRP0 275 aa10.68□□□□□ -0.7
CD48-203ENST00000613788 SMIM9A6NGZ8 99 aa10.67□□□□□ -0.7
CD48-203ENST00000613788 NHLRC4P0CG21 123 aaPredicted RBP10.67□□□□□ -0.7
CD48-203ENST00000613788 OR11H2Q8NH07 326 aa10.67□□□□□ -0.7
CD48-203ENST00000613788 KCNS1Q96KK3 526 aa10.67□□□□□ -0.7
CD48-203ENST00000613788 NEU1Q99519 415 aa10.67□□□□□ -0.7
CD48-203ENST00000613788 LINC00467Q9BRT7 94 aa10.67□□□□□ -0.7
CD48-203ENST00000613788 IGHV1OR15-1A0A075B7D0 117 aa10.66□□□□□ -0.7
CD48-203ENST00000613788 F8W036 122 aa10.66□□□□□ -0.7
CD48-203ENST00000613788 SH2D1AO60880 128 aa10.66□□□□□ -0.7
CD48-203ENST00000613788 HTN1P15515 57 aa10.66□□□□□ -0.7
CD48-203ENST00000613788 Q6ZQT7 251 aa10.66□□□□□ -0.7
CD48-203ENST00000613788 LINC01551Q86U37 167 aa10.66□□□□□ -0.7
CD48-203ENST00000613788 SDF2L1Q9HCN8 221 aa10.66□□□□□ -0.7
CD48-203ENST00000613788 MEGF8Q7Z7M0 2845 aa10.66□□□□□ -0.7
CD48-203ENST00000613788 K7EN84 100 aa10.65□□□□□ -0.7
CD48-203ENST00000613788 OR5I1Q13606 314 aa10.65□□□□□ -0.7
CD48-203ENST00000613788 RRN3P1Q2M238 152 aa10.65□□□□□ -0.7
CD48-203ENST00000613788 MUC21Q5SSG8 566 aa10.65□□□□□ -0.7
CD48-203ENST00000613788 SEC11CQ9BY50 192 aa10.65□□□□□ -0.7
CD48-203ENST00000613788 NAGKQ9UJ70 344 aa10.65□□□□□ -0.7
CD48-203ENST00000613788 CBY3A6NI87 242 aa10.64□□□□□ -0.71
CD48-203ENST00000613788 ORM1P02763 201 aa10.64□□□□□ -0.71
CD48-203ENST00000613788 MIFP14174 115 aa10.64□□□□□ -0.71
CD48-203ENST00000613788 RPL23P62829 140 aaKnown RBP10.64□□□□□ -0.71
CD48-203ENST00000613788 TDRG1Q3Y452 100 aa10.64□□□□□ -0.71
CD48-203ENST00000613788 ANXA2RQ3ZCQ2 193 aa10.64□□□□□ -0.71
CD48-203ENST00000613788 SLC7A5P1Q8MH63 180 aa10.64□□□□□ -0.71
CD48-203ENST00000613788 RETNQ9HD89 108 aa10.64□□□□□ -0.71
CD48-203ENST00000613788 X6R8D5 127 aa10.64□□□□□ -0.71
CD48-203ENST00000613788 C19orf71A6NCJ1 209 aa10.63□□□□□ -0.71
CD48-203ENST00000613788 ZNF705GA8MUZ8 300 aaPredicted RBP10.63□□□□□ -0.71
CD48-203ENST00000613788 P01737 135 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms