RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 CCL25O15444 150 aa10.79□□□□□ -0.68
PCDHGA3-202ENST00000612467 EVI2AP22794 236 aa10.79□□□□□ -0.68
PCDHGA3-202ENST00000612467 OR8A1Q8NGG7 326 aa10.79□□□□□ -0.68
PCDHGA3-202ENST00000612467 C20orf173Q96LM9 149 aa10.79□□□□□ -0.68
PCDHGA3-202ENST00000612467 METTL26Q96S19 204 aa10.79□□□□□ -0.68
PCDHGA3-202ENST00000612467 IGKV3D-20A0A0C4DH25 116 aa10.78□□□□□ -0.68
PCDHGA3-202ENST00000612467 SNAI2O43623 268 aa10.78□□□□□ -0.68
PCDHGA3-202ENST00000612467 LAMTOR2Q9Y2Q5 125 aa10.78□□□□□ -0.68
PCDHGA3-202ENST00000612467 IGLC6P0CF74 106 aa10.78□□□□□ -0.68
PCDHGA3-202ENST00000612467 PRR9Q5T870 116 aa10.78□□□□□ -0.68
PCDHGA3-202ENST00000612467 PRSS57Q6UWY2 283 aa10.78□□□□□ -0.68
PCDHGA3-202ENST00000612467 ZNF493Q6ZR52 646 aa10.78□□□□□ -0.68
PCDHGA3-202ENST00000612467 OR5AL1P0C617 328 aa10.78□□□□□ -0.68
PCDHGA3-202ENST00000612467 SRD5A1P18405 259 aa10.78□□□□□ -0.68
PCDHGA3-202ENST00000612467 ARL3P36405 182 aa10.78□□□□□ -0.68
PCDHGA3-202ENST00000612467 TLN2Q9Y4G6 2542 aa10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 C19orf54Q5BKX5 351 aa10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 ERASQ7Z444 233 aa10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 GATD1Q8NB37 220 aa10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 MAP1LC3CQ9BXW4 147 aa10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 ZNF469Q96JG9 3925 aaPredicted RBP10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 TRBV7-1A0A0A6YYK4 115 aa10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 FABP5P3A8MUU1 101 aa10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 CRXO43186 299 aaPredicted RBP10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 CKS2P33552 79 aa10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 Q6AWC8 147 aa10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 CLEC2AQ6UVW9 174 aa10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 KLHDC1Q8N7A1 406 aa10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 ZNF747Q9BV97 191 aa10.77□□□□□ -0.69
PCDHGA3-202ENST00000612467 SORL1Q92673 2214 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 F6UB75 175 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 PF4V1P10720 104 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 KIR3DS1Q14943 382 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 C10orf99Q6UWK7 81 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 ORMDL3Q8N138 153 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 HIF1ANQ9NWT6 349 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 NBPF19A0A087WUL8 3843 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 A0A087X0K7 114 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 BMI1P35226 326 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 COX8CQ7Z4L0 72 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 OR10AG1Q8NH19 301 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 GLMPQ8WWB7 406 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 RNF185Q96GF1 192 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 C16orf92Q96LL3 132 aa10.76□□□□□ -0.69
PCDHGA3-202ENST00000612467 EPG5Q9HCE0 2579 aa10.75□□□□□ -0.69
PCDHGA3-202ENST00000612467 TRAV26-2A0A0B4J265 109 aa10.75□□□□□ -0.69
PCDHGA3-202ENST00000612467 RPL11P62913 178 aaKnown RBP10.75□□□□□ -0.69
PCDHGA3-202ENST00000612467 GPHB5Q86YW7 130 aa10.75□□□□□ -0.69
PCDHGA3-202ENST00000612467 COL5A1-AS1Q5SY13 56 aa10.74□□□□□ -0.69
PCDHGA3-202ENST00000612467 C18orf15Q96N68 181 aa10.74□□□□□ -0.69
PCDHGA3-202ENST00000612467 A1L4Q6 167 aa10.74□□□□□ -0.69
PCDHGA3-202ENST00000612467 KLK9Q2XQG4 91 aa10.74□□□□□ -0.69
PCDHGA3-202ENST00000612467 WFDC12Q8WWY7 111 aa10.74□□□□□ -0.69
PCDHGA3-202ENST00000612467 KLK9Q9UKQ9 250 aa10.74□□□□□ -0.69
PCDHGA3-202ENST00000612467 U3KQE9 123 aa10.74□□□□□ -0.69
PCDHGA3-202ENST00000612467 U3KQK5 164 aa10.74□□□□□ -0.69
PCDHGA3-202ENST00000612467 TEX15Q9BXT5 2789 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 A0A1B0GW15 77 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 MSMBP08118 114 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 COTL1Q14019 142 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 TM4SF20Q53R12 229 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 TMEM78Q5T7P6 136 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 SLC50A1Q9BRV3 221 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 CREBBPQ92793 2442 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 PTTG1IPP53801 180 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 RNF151Q2KHN1 245 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 ZNF738Q8NE65 137 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 TMEM191AQ9H0A3 160 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 MEGF9Q9H1U4 602 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 HSPB8Q9UJY1 196 aa10.73□□□□□ -0.69
PCDHGA3-202ENST00000612467 A6NDX4 124 aa10.72□□□□□ -0.69
PCDHGA3-202ENST00000612467 MPV17L2Q567V2 206 aa10.72□□□□□ -0.69
PCDHGA3-202ENST00000612467 OR4X2Q8NGF9 303 aa10.72□□□□□ -0.69
PCDHGA3-202ENST00000612467 C20orf202A1L168 122 aa10.71□□□□□ -0.69
PCDHGA3-202ENST00000612467 CACNG7P62955 275 aa10.71□□□□□ -0.69
PCDHGA3-202ENST00000612467 LINC01559Q495D7 138 aa10.71□□□□□ -0.69
PCDHGA3-202ENST00000612467 UFC1Q9Y3C8 167 aa10.71□□□□□ -0.69
PCDHGA3-202ENST00000612467 NAV2Q8IVL1 2488 aa10.71□□□□□ -0.69
PCDHGA3-202ENST00000612467 H3BVH4 76 aa10.71□□□□□ -0.69
PCDHGA3-202ENST00000612467 S100A7P31151 101 aa10.71□□□□□ -0.69
PCDHGA3-202ENST00000612467 LINC01545Q5VT33 79 aa10.71□□□□□ -0.69
PCDHGA3-202ENST00000612467 PET117Q6UWS5 81 aa10.71□□□□□ -0.69
PCDHGA3-202ENST00000612467 IGHV7-4-1A0A0J9YVY3 117 aa10.71□□□□□ -0.7
PCDHGA3-202ENST00000612467 IGHV4-59P01825 116 aa10.71□□□□□ -0.7
PCDHGA3-202ENST00000612467 IGHG2P01859 326 aa10.71□□□□□ -0.7
PCDHGA3-202ENST00000612467 RAB9AP51151 201 aa10.71□□□□□ -0.7
PCDHGA3-202ENST00000612467 FAM223BA6NKX1 122 aa10.7□□□□□ -0.7
PCDHGA3-202ENST00000612467 RPS20P60866 119 aaKnown RBP10.7□□□□□ -0.7
PCDHGA3-202ENST00000612467 FAM223AQ8IWN6 122 aa10.7□□□□□ -0.7
PCDHGA3-202ENST00000612467 BBC3Q96PG8 261 aaPredicted RBP10.7□□□□□ -0.7
PCDHGA3-202ENST00000612467 SCRT2Q9NQ03 307 aa10.7□□□□□ -0.7
PCDHGA3-202ENST00000612467 SONP18583 2426 aaKnown RBP10.69□□□□□ -0.7
PCDHGA3-202ENST00000612467 MYO9AB2RTY4 2548 aa10.69□□□□□ -0.7
PCDHGA3-202ENST00000612467 MRPS16Q9Y3D3 137 aaKnown RBP10.69□□□□□ -0.7
PCDHGA3-202ENST00000612467 AGRNO00468 2067 aa10.69□□□□□ -0.7
PCDHGA3-202ENST00000612467 RBAKDNA6NC62 111 aa10.69□□□□□ -0.7
PCDHGA3-202ENST00000612467 TNFRSF6BO95407 300 aa10.69□□□□□ -0.7
PCDHGA3-202ENST00000612467 HIST2H2BDQ6DRA6 164 aa10.69□□□□□ -0.7
PCDHGA3-202ENST00000612467 DEFB104AQ8WTQ1 72 aa10.69□□□□□ -0.7
PCDHGA3-202ENST00000612467 TMEM190Q8WZ59 177 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms