RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 LY6G6CO95867 125 aa6.18□□□□□ -1.42
SNCA-212ENST00000611107 Q6ZQT7 251 aa6.18□□□□□ -1.42
SNCA-212ENST00000611107 Q86TA4 180 aa6.18□□□□□ -1.42
SNCA-212ENST00000611107 TMEM256Q8N2U0 113 aa6.18□□□□□ -1.42
SNCA-212ENST00000611107 TMEM75Q8N9X5 138 aa6.18□□□□□ -1.42
SNCA-212ENST00000611107 TVP23CQ96ET8 276 aa6.18□□□□□ -1.42
SNCA-212ENST00000611107 SGK494Q96LW2 274 aa6.18□□□□□ -1.42
SNCA-212ENST00000611107 EPDR1Q9UM22 224 aa6.18□□□□□ -1.42
SNCA-212ENST00000611107 TRAV12-3A0A0B4J271 114 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 SCO2A0A1W2PP80 73 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 PLAC8L1A1L4L8 177 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 ZNF705GA8MUZ8 300 aaPredicted RBP6.17□□□□□ -1.42
SNCA-212ENST00000611107 F6UZH7 168 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 IFNA7P01567 189 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 HBE1P02100 147 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 AZU1P20160 251 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 CST9LP1Q5W188 147 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 LYPD6BQ8NI32 183 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 LINC00479Q96M42 142 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 C20orf144Q9BQM9 153 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 TCEAL7Q9BRU2 100 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 TMEM208Q9BTX3 173 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 NKX6-2Q9C056 277 aaPredicted RBP6.17□□□□□ -1.42
SNCA-212ENST00000611107 MANBALQ9NQG1 85 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 GNG13Q9P2W3 67 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 LENEPQ9Y5L5 61 aa6.17□□□□□ -1.42
SNCA-212ENST00000611107 FAT2Q9NYQ8 4349 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 TRAV34A0A0B4J273 112 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 LOC102723971A0A1B0GUV8 181 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 SMIM9A6NGZ8 99 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 C11orf94C9JXX5 98 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 H7BYZ3 331 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 ZNF324O75467 553 aaPredicted RBP6.16□□□□□ -1.42
SNCA-212ENST00000611107 GPX1P07203 203 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 NMBP08949 121 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 BCL2P10415 239 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 PPT1P50897 306 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 EMP1P54849 157 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 FLI1Q01543 452 aaPredicted RBP6.16□□□□□ -1.42
SNCA-212ENST00000611107 Q6AWC8 147 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 C2CD4CQ8TF44 421 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 HIST1H2BAQ96A08 127 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 C8orf49Q96NF6 230 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 PSG8Q9UQ74 426 aa6.16□□□□□ -1.42
SNCA-212ENST00000611107 DNAH2Q9P225 4427 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 DNAH17Q9UFH2 4485 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 IGLL5B9A064 214 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 K7EQM0 130 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 RNASE4P34096 147 aaKnown RBP6.15□□□□□ -1.42
SNCA-212ENST00000611107 AKR1C3P42330 323 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 TAS2R60P59551 318 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 RRN3P1Q2M238 152 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 TEX261Q6UWH6 196 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 PRNTQ86SH4 94 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 RNASE8Q8TDE3 154 aaKnown RBP6.15□□□□□ -1.42
SNCA-212ENST00000611107 TMEM263Q8WUH6 116 aaKnown RBP6.15□□□□□ -1.42
SNCA-212ENST00000611107 C11orf52Q96A22 123 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 LINC01587Q99440 93 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 NIPSNAP3BQ9BS92 247 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 TREM1Q9NP99 234 aa6.15□□□□□ -1.42
SNCA-212ENST00000611107 FBLL1A6NHQ2 334 aaKnown RBP6.14□□□□□ -1.43
SNCA-212ENST00000611107 TEX46H3BTG2 121 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 IFNA1P01562 189 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 HTN1P15515 57 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 ZNF80P51504 273 aaPredicted RBP6.14□□□□□ -1.43
SNCA-212ENST00000611107 BLOC1S1P78537 153 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 MEF2BQ02080 365 aaPredicted RBP6.14□□□□□ -1.43
SNCA-212ENST00000611107 FAM222AQ5U5X8 452 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 C11orf72Q8NBR9 251 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 ZNF680Q8NEM1 530 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 PCNPQ8WW12 178 aaKnown RBP6.14□□□□□ -1.43
SNCA-212ENST00000611107 C16orf74Q96GX8 76 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 FMC1Q96HJ9 113 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 PYGO2Q9BRQ0 406 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 LINC00467Q9BRT7 94 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 NDFIP1Q9BT67 221 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 DERL1Q9BUN8 251 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 DKK2Q9UBU2 259 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 KLF12Q9Y4X4 402 aa6.14□□□□□ -1.43
SNCA-212ENST00000611107 IGHV4-4A0A075B6R2 117 aa6.13□□□□□ -1.43
SNCA-212ENST00000611107 TRBV6-1A0A0K0K1D8 114 aa6.13□□□□□ -1.43
SNCA-212ENST00000611107 TMEM189A5PLL7 270 aa6.13□□□□□ -1.43
SNCA-212ENST00000611107 GCGP01275 180 aa6.13□□□□□ -1.43
SNCA-212ENST00000611107 LTAP01374 205 aa6.13□□□□□ -1.43
SNCA-212ENST00000611107 UBE2G1P62253 170 aa6.13□□□□□ -1.43
SNCA-212ENST00000611107 TMEM183BQ1AE95 376 aa6.13□□□□□ -1.43
SNCA-212ENST00000611107 MUC21Q5SSG8 566 aa6.13□□□□□ -1.43
SNCA-212ENST00000611107 ZC2HC1AQ96GY0 325 aa6.13□□□□□ -1.43
SNCA-212ENST00000611107 C11orf21Q9P2W6 132 aa6.13□□□□□ -1.43
SNCA-212ENST00000611107 TP53TG3Q9ULZ0 132 aa6.13□□□□□ -1.43
SNCA-212ENST00000611107 KLK5Q9Y337 293 aaPredicted RBP6.13□□□□□ -1.43
SNCA-212ENST00000611107 IGHV1OR15-1A0A075B7D0 117 aa6.12□□□□□ -1.43
SNCA-212ENST00000611107 DEFB131BA0A096LNP1 70 aa6.12□□□□□ -1.43
SNCA-212ENST00000611107 TRAV21A0A0B4J279 112 aa6.12□□□□□ -1.43
SNCA-212ENST00000611107 RGS13O14921 159 aa6.12□□□□□ -1.43
SNCA-212ENST00000611107 RPL35P42766 123 aaKnown RBP6.12□□□□□ -1.43
SNCA-212ENST00000611107 TDRG1Q3Y452 100 aa6.12□□□□□ -1.43
SNCA-212ENST00000611107 ANXA2RQ3ZCQ2 193 aa6.12□□□□□ -1.43
SNCA-212ENST00000611107 SMUG1Q53HV7 270 aa6.12□□□□□ -1.43
SNCA-212ENST00000611107 ZNF506Q5JVG8 444 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms