RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 QRFPP83859 136 aa0.12□□□□□ -2.39
RNU6-88P-201ENST00000606801 TRIQKQ629K1 86 aa0.12□□□□□ -2.39
RNU6-88P-201ENST00000606801 XAF1Q6GPH4 301 aa0.12□□□□□ -2.39
RNU6-88P-201ENST00000606801 TEX29Q8N6K0 151 aa0.12□□□□□ -2.39
RNU6-88P-201ENST00000606801 C5orf17Q8NAS9 161 aa0.12□□□□□ -2.39
RNU6-88P-201ENST00000606801 ISOC1Q96CN7 298 aa0.12□□□□□ -2.39
RNU6-88P-201ENST00000606801 CIB3Q96Q77 187 aaPredicted RBP0.12□□□□□ -2.39
RNU6-88P-201ENST00000606801 HELZP42694 1942 aaKnown RBP0.12□□□□□ -2.39
RNU6-88P-201ENST00000606801 TRBV27A0A0K0K1C4 114 aa0.11□□□□□ -2.39
RNU6-88P-201ENST00000606801 C5orf58C9J3I9 102 aa0.11□□□□□ -2.39
RNU6-88P-201ENST00000606801 FXYD6P3P58550 94 aa0.11□□□□□ -2.39
RNU6-88P-201ENST00000606801 TSKUQ8WUA8 353 aa0.11□□□□□ -2.39
RNU6-88P-201ENST00000606801 LINC00208Q96KT6 92 aa0.11□□□□□ -2.39
RNU6-88P-201ENST00000606801 TANC1Q9C0D5 1861 aa0.11□□□□□ -2.39
RNU6-88P-201ENST00000606801 DLEC1Q9Y238 1755 aa0.11□□□□□ -2.39
RNU6-88P-201ENST00000606801 F8P00451 2351 aa0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 A0A1W2PRS3 328 aa0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 SULT1C4O75897 302 aa0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 SAA1P0DJI8 122 aaPredicted RBP0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 TPT1P13693 172 aaKnown RBP0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 RPS3P23396 243 aaKnown RBP eCLIP0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 FXYD3Q14802 87 aa0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 LINC00305Q7Z4B0 112 aa0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 DEFB132Q7Z7B7 95 aa0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 MORN4Q8NDC4 146 aa0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 GRPEL2Q8TAA5 225 aa0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 PCBD2Q9H0N5 130 aa0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 ABCA12Q86UK0 2595 aa0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 RREB1Q92766 1687 aa0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 MYO7AQ13402 2215 aa0.1□□□□□ -2.39
RNU6-88P-201ENST00000606801 GYPBP06028 91 aa0.09□□□□□ -2.4
RNU6-88P-201ENST00000606801 RPL37P61927 97 aaKnown RBP0.09□□□□□ -2.4
RNU6-88P-201ENST00000606801 TCTEX1D1Q8N7M0 179 aa0.09□□□□□ -2.4
RNU6-88P-201ENST00000606801 C5orf56Q8N8D9 126 aa0.09□□□□□ -2.4
RNU6-88P-201ENST00000606801 THEM6Q8WUY1 208 aa0.09□□□□□ -2.4
RNU6-88P-201ENST00000606801 MED31Q9Y3C7 131 aa0.09□□□□□ -2.4
RNU6-88P-201ENST00000606801 PLXNA2O75051 1894 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 F5P12259 2224 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 TRBV7-6A0A0J9YX20 115 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 A0A1W2PPB8 328 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 KIR3DP1A8MWS1 328 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 EVI2AP22794 236 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 POLR2HP52434 150 aaKnown RBP0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 SNRPD3P62318 126 aaKnown RBP0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 TMEM229BQ8NBD8 167 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 OR51A4Q8NGJ6 313 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 AP1S3Q96PC3 154 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 MRPL35Q9NZE8 188 aaKnown RBP0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 SMPXQ9UHP9 88 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 LAMTOR2Q9Y2Q5 125 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 MPC1Q9Y5U8 109 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 POLQO75417 2590 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 KIDINS220Q9ULH0 1771 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 IGSF10Q6WRI0 2623 aa0.08□□□□□ -2.4
RNU6-88P-201ENST00000606801 ASXL3Q9C0F0 2248 aa0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 LRP1Q07954 4544 aaKnown RBP0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 TRAV13-1A0A0B4J241 112 aa0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 LOC107984156A0A0G2JMH3 177 aa0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 LOC107984640A0A0U1RRK4 108 aa0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 LOC101927531A0A1B0GV80 90 aa0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 SLC25A4P12235 298 aa0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 RPL7P18124 248 aaKnown RBP0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 ZNF56Q15929 161 aa0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 ARL17AQ8IVW1 177 aa0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 CCDC32Q9BV29 185 aa0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 CBLN4Q9NTU7 201 aa0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 COMMD3Q9UBI1 195 aa0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 NCOR2Q9Y618 2525 aa0.07□□□□□ -2.4
RNU6-88P-201ENST00000606801 LRP5O75197 1615 aa0.06□□□□□ -2.4
RNU6-88P-201ENST00000606801 IGF2P01344 180 aa0.06□□□□□ -2.4
RNU6-88P-201ENST00000606801 CRYGSP22914 178 aa0.06□□□□□ -2.4
RNU6-88P-201ENST00000606801 C3orf62Q6ZUJ4 267 aa0.06□□□□□ -2.4
RNU6-88P-201ENST00000606801 TRAPPC2LQ9UL33 140 aa0.06□□□□□ -2.4
RNU6-88P-201ENST00000606801 KMT2DO14686 5537 aa0.05□□□□□ -2.4
RNU6-88P-201ENST00000606801 LOC107986453A0A1B0GWG9 222 aa0.05□□□□□ -2.4
RNU6-88P-201ENST00000606801 ARL5CA6NH57 179 aa0.05□□□□□ -2.4
RNU6-88P-201ENST00000606801 H3BMG7 143 aa0.05□□□□□ -2.4
RNU6-88P-201ENST00000606801 CDC42EP2O14613 210 aa0.05□□□□□ -2.4
RNU6-88P-201ENST00000606801 SPINK13Q1W4C9 94 aa0.05□□□□□ -2.4
RNU6-88P-201ENST00000606801 LXNQ9BS40 222 aa0.05□□□□□ -2.4
RNU6-88P-201ENST00000606801 MRPL36Q9P0J6 103 aaKnown RBP0.05□□□□□ -2.4
RNU6-88P-201ENST00000606801 ATPIF1Q9UII2 106 aa0.05□□□□□ -2.4
RNU6-88P-201ENST00000606801 PRORSD1PA6NEY8 169 aa0.04□□□□□ -2.4
RNU6-88P-201ENST00000606801 BBIP1A8MTZ0 92 aa0.04□□□□□ -2.4
RNU6-88P-201ENST00000606801 M0QZK8 103 aa0.04□□□□□ -2.4
RNU6-88P-201ENST00000606801 EDF1O60869 148 aaKnown RBP0.04□□□□□ -2.4
RNU6-88P-201ENST00000606801 DNAJB13P59910 316 aa0.04□□□□□ -2.4
RNU6-88P-201ENST00000606801 BLCAPP62952 87 aa0.04□□□□□ -2.4
RNU6-88P-201ENST00000606801 CCSMST1Q4G0I0 132 aa0.04□□□□□ -2.4
RNU6-88P-201ENST00000606801 NAT14Q8WUY8 206 aa0.04□□□□□ -2.4
RNU6-88P-201ENST00000606801 DMBT1Q9UGM3 2413 aaPredicted RBP0.04□□□□□ -2.4
RNU6-88P-201ENST00000606801 A2MP01023 1474 aa0.03□□□□□ -2.4
RNU6-88P-201ENST00000606801 CDK12Q9NYV4 1490 aaPredicted RBP0.03□□□□□ -2.4
RNU6-88P-201ENST00000606801 KDM6BO15054 1643 aa0.03□□□□□ -2.4
RNU6-88P-201ENST00000606801 E7EQ34 232 aa0.03□□□□□ -2.4
RNU6-88P-201ENST00000606801 IGKCP01834 107 aa0.03□□□□□ -2.4
RNU6-88P-201ENST00000606801 LYPD5Q6UWN5 251 aa0.03□□□□□ -2.4
RNU6-88P-201ENST00000606801 SPINK6Q6UWN8 80 aa0.03□□□□□ -2.4
RNU6-88P-201ENST00000606801 C19orf12Q9NSK7 152 aa0.03□□□□□ -2.4
RNU6-88P-201ENST00000606801 CPDO75976 1380 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms