RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 ZNF502Q8TBZ5 544 aa12□□□□□ -0.49
RER1-209ENST00000605895 ZNF48Q96MX3 618 aaPredicted RBP12□□□□□ -0.49
RER1-209ENST00000605895 BDP1A6H8Y1 2624 aa12□□□□□ -0.49
RER1-209ENST00000605895 IL17RELQ6ZVW7 336 aa12□□□□□ -0.49
RER1-209ENST00000605895 PLEKHB2Q96CS7 222 aa12□□□□□ -0.49
RER1-209ENST00000605895 ONECUT1Q9UBC0 465 aa12□□□□□ -0.49
RER1-209ENST00000605895 ANKRD11Q6UB99 2663 aaPredicted RBP12□□□□□ -0.49
RER1-209ENST00000605895 IGHV1-3A0A0C4DH29 117 aa12□□□□□ -0.49
RER1-209ENST00000605895 OR11H12B2RN74 326 aa12□□□□□ -0.49
RER1-209ENST00000605895 CD40P25942 277 aa12□□□□□ -0.49
RER1-209ENST00000605895 GFRALQ6UXV0 394 aa12□□□□□ -0.49
RER1-209ENST00000605895 Q6ZUT4 128 aa12□□□□□ -0.49
RER1-209ENST00000605895 OR11H1Q8NG94 326 aa12□□□□□ -0.49
RER1-209ENST00000605895 OR11H2Q8NH07 326 aa12□□□□□ -0.49
RER1-209ENST00000605895 TRBV20-1A0A075B6N2 111 aa11.99□□□□□ -0.49
RER1-209ENST00000605895 PRTN3P24158 256 aa11.99□□□□□ -0.49
RER1-209ENST00000605895 DYNAPQ8N1N2 210 aa11.99□□□□□ -0.49
RER1-209ENST00000605895 CFHR4Q92496 578 aa11.99□□□□□ -0.49
RER1-209ENST00000605895 RALYQ9UKM9 306 aaKnown RBP11.99□□□□□ -0.49
RER1-209ENST00000605895 ANAPC13Q9BS18 74 aa11.99□□□□□ -0.49
RER1-209ENST00000605895 TMEM238LA0A1B0GVL6 79 aa11.98□□□□□ -0.49
RER1-209ENST00000605895 IGHG3P01860 377 aa11.98□□□□□ -0.49
RER1-209ENST00000605895 TCTEX1D4Q5JR98 221 aa11.98□□□□□ -0.49
RER1-209ENST00000605895 C1QTNF4Q9BXJ3 329 aa11.98□□□□□ -0.49
RER1-209ENST00000605895 NXT2Q9NPJ8 142 aaKnown RBP11.98□□□□□ -0.49
RER1-209ENST00000605895 K7EM74 188 aa11.98□□□□□ -0.49
RER1-209ENST00000605895 MRPS12O15235 138 aaKnown RBP11.98□□□□□ -0.49
RER1-209ENST00000605895 TEX36Q5VZQ5 186 aa11.97□□□□□ -0.49
RER1-209ENST00000605895 C1orf122Q6ZSJ8 110 aa11.97□□□□□ -0.49
RER1-209ENST00000605895 PTPRZ1P23471 2315 aaPredicted RBP11.97□□□□□ -0.49
RER1-209ENST00000605895 CARD19Q96LW7 228 aa11.97□□□□□ -0.49
RER1-209ENST00000605895 C11orf21Q9P2W6 132 aa11.97□□□□□ -0.49
RER1-209ENST00000605895 COL6A6A6NMZ7 2263 aa11.97□□□□□ -0.49
RER1-209ENST00000605895 TRBV7-3A0A075B6L6 115 aa11.97□□□□□ -0.49
RER1-209ENST00000605895 C17orf100A8MU93 164 aa11.97□□□□□ -0.49
RER1-209ENST00000605895 ATP5LO75964 103 aa11.97□□□□□ -0.49
RER1-209ENST00000605895 IGLC6P0CF74 106 aa11.97□□□□□ -0.49
RER1-209ENST00000605895 DEFB109BQ30KR1 87 aa11.97□□□□□ -0.49
RER1-209ENST00000605895 ZNF815PA8K554 130 aa11.96□□□□□ -0.49
RER1-209ENST00000605895 SCGB1C2P0DMR2 95 aa11.96□□□□□ -0.49
RER1-209ENST00000605895 SLC25A16P16260 332 aa11.96□□□□□ -0.49
RER1-209ENST00000605895 LAGE3Q14657 143 aa11.96□□□□□ -0.49
RER1-209ENST00000605895 RAXQ9Y2V3 346 aa11.96□□□□□ -0.49
RER1-209ENST00000605895 TTC28Q96AY4 2481 aa11.96□□□□□ -0.49
RER1-209ENST00000605895 MYMXA0A1B0GTQ4 84 aa11.96□□□□□ -0.5
RER1-209ENST00000605895 TMEM178BH3BS89 294 aa11.96□□□□□ -0.5
RER1-209ENST00000605895 CFAP126Q5VTH2 177 aa11.96□□□□□ -0.5
RER1-209ENST00000605895 HIF1ANQ9NWT6 349 aa11.96□□□□□ -0.5
RER1-209ENST00000605895 TIMM23O14925 209 aa11.95□□□□□ -0.5
RER1-209ENST00000605895 LGALS1P09382 135 aaKnown RBP11.95□□□□□ -0.5
RER1-209ENST00000605895 ADIPOQQ15848 244 aa11.95□□□□□ -0.5
RER1-209ENST00000605895 TMEM78Q5T7P6 136 aa11.95□□□□□ -0.5
RER1-209ENST00000605895 DLX4Q92988 240 aaPredicted RBP11.95□□□□□ -0.5
RER1-209ENST00000605895 Q8N8P6 123 aa11.95□□□□□ -0.5
RER1-209ENST00000605895 SPTAN1Q13813 2472 aaKnown RBP11.95□□□□□ -0.5
RER1-209ENST00000605895 A0A087WX48 190 aa11.95□□□□□ -0.5
RER1-209ENST00000605895 FABP5P3A8MUU1 101 aa11.95□□□□□ -0.5
RER1-209ENST00000605895 SPANXN1Q5VSR9 72 aa11.95□□□□□ -0.5
RER1-209ENST00000605895 RAX2Q96IS3 184 aa11.95□□□□□ -0.5
RER1-209ENST00000605895 SCGB3A1Q96QR1 104 aa11.95□□□□□ -0.5
RER1-209ENST00000605895 PRADC1Q9BSG0 188 aa11.95□□□□□ -0.5
RER1-209ENST00000605895 CUBNO60494 3623 aa11.94□□□□□ -0.5
RER1-209ENST00000605895 CRYGBP07316 175 aa11.94□□□□□ -0.5
RER1-209ENST00000605895 SMAD5-AS1Q9Y6J3 95 aa11.94□□□□□ -0.5
RER1-209ENST00000605895 M0R381 172 aa11.94□□□□□ -0.5
RER1-209ENST00000605895 TSPAN13O95857 204 aa11.94□□□□□ -0.5
RER1-209ENST00000605895 IGHG4P01861 327 aa11.94□□□□□ -0.5
RER1-209ENST00000605895 BSPH1Q075Z2 132 aa11.94□□□□□ -0.5
RER1-209ENST00000605895 C3orf56Q8N813 242 aa11.94□□□□□ -0.5
RER1-209ENST00000605895 FAM215AQ9Y5M1 114 aa11.94□□□□□ -0.5
RER1-209ENST00000605895 IGKV3D-20A0A0C4DH25 116 aa11.93□□□□□ -0.5
RER1-209ENST00000605895 DYNLRB1Q9NP97 96 aa11.93□□□□□ -0.5
RER1-209ENST00000605895 COL12A1Q99715 3063 aa11.93□□□□□ -0.5
RER1-209ENST00000605895 TRBV6-1A0A0K0K1D8 114 aa11.93□□□□□ -0.5
RER1-209ENST00000605895 BUB1B-PAK6H3BSN5 160 aa11.93□□□□□ -0.5
RER1-209ENST00000605895 LY6HO94772 140 aa11.93□□□□□ -0.5
RER1-209ENST00000605895 DEFB1P60022 68 aa11.93□□□□□ -0.5
RER1-209ENST00000605895 TMEM155Q4W5P6 130 aa11.93□□□□□ -0.5
RER1-209ENST00000605895 LYPD1Q8N2G4 141 aa11.93□□□□□ -0.5
RER1-209ENST00000605895 CELSR1Q9NYQ6 3014 aa11.93□□□□□ -0.5
RER1-209ENST00000605895 TCL1BO95988 128 aa11.92□□□□□ -0.5
RER1-209ENST00000605895 RPL39LQ96EH5 51 aaKnown RBP11.92□□□□□ -0.5
RER1-209ENST00000605895 ZFHX3Q15911 3703 aa11.92□□□□□ -0.5
RER1-209ENST00000605895 AKAP13Q12802 2813 aa11.92□□□□□ -0.5
RER1-209ENST00000605895 IGLV2-18A0A075B6J9 118 aa11.92□□□□□ -0.5
RER1-209ENST00000605895 ARL3P36405 182 aa11.92□□□□□ -0.5
RER1-209ENST00000605895 DLX6P56179 175 aa11.92□□□□□ -0.5
RER1-209ENST00000605895 KLRD1Q13241 179 aa11.92□□□□□ -0.5
RER1-209ENST00000605895 TRAV17A0A0B4J275 112 aa11.91□□□□□ -0.5
RER1-209ENST00000605895 CEACAM4O75871 244 aa11.91□□□□□ -0.5
RER1-209ENST00000605895 IGF1P05019 195 aa11.91□□□□□ -0.5
RER1-209ENST00000605895 PVRIGQ6DKI7 326 aa11.91□□□□□ -0.5
RER1-209ENST00000605895 BEX4Q9NWD9 120 aaPredicted RBP11.91□□□□□ -0.5
RER1-209ENST00000605895 MGPP08493 103 aa11.9□□□□□ -0.5
RER1-209ENST00000605895 TMEM30BQ3MIR4 351 aa11.9□□□□□ -0.5
RER1-209ENST00000605895 PIFOQ8TCI5 191 aa11.9□□□□□ -0.5
RER1-209ENST00000605895 H7C1H1 209 aa11.9□□□□□ -0.5
RER1-209ENST00000605895 CRIP2P52943 208 aaPredicted RBP11.9□□□□□ -0.5
RER1-209ENST00000605895 SRSF1Q07955 248 aaKnown RBP eCLIP11.9□□□□□ -0.53e-9■■□□□ 14.3
RER1-209ENST00000605895 ANKRD29Q8N6D5 301 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms