RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	MINOS1	Q5TGZ0	78 aa		11.94	□□□□□ -0.5
CELF4-223	ENST00000603232	PRELID3A	Q96N28	172 aa		11.94	□□□□□ -0.5
CELF4-223	ENST00000603232	CNFN	Q9BYD5	112 aa		11.94	□□□□□ -0.5
CELF4-223	ENST00000603232	SIGLEC8	Q9NYZ4	499 aa		11.94	□□□□□ -0.5
CELF4-223	ENST00000603232	MINOS1-NBL1	R4GNA1	71 aa		11.94	□□□□□ -0.5
CELF4-223	ENST00000603232	F8	P00451	2351 aa		11.94	□□□□□ -0.5
CELF4-223	ENST00000603232		D6R8Y8	96 aa		11.94	□□□□□ -0.5
CELF4-223	ENST00000603232	IGLC6	P0CF74	106 aa		11.94	□□□□□ -0.5
CELF4-223	ENST00000603232	IFI27	P40305	119 aa	Predicted RBP	11.94	□□□□□ -0.5
CELF4-223	ENST00000603232	KLF17	Q5JT82	389 aa	Predicted RBP	11.94	□□□□□ -0.5
CELF4-223	ENST00000603232	PEF1	Q9UBV8	284 aa	Known RBP	11.94	□□□□□ -0.5
CELF4-223	ENST00000603232	LINC01546	A6NGU7	62 aa		11.93	□□□□□ -0.5
CELF4-223	ENST00000603232	FAM106CP	P0CH98	169 aa		11.93	□□□□□ -0.5
CELF4-223	ENST00000603232	SEC11A	P67812	179 aa		11.93	□□□□□ -0.5
CELF4-223	ENST00000603232	KRTAP1-1	Q07627	177 aa		11.93	□□□□□ -0.5
CELF4-223	ENST00000603232	FAM106A	Q4KMX7	169 aa		11.93	□□□□□ -0.5
CELF4-223	ENST00000603232	TMEM97	Q5BJF2	176 aa		11.93	□□□□□ -0.5
CELF4-223	ENST00000603232	UFSP1	Q6NVU6	142 aa		11.93	□□□□□ -0.5
CELF4-223	ENST00000603232	BCL6B	Q8N143	479 aa	Predicted RBP	11.93	□□□□□ -0.5
CELF4-223	ENST00000603232	SON	P18583	2426 aa	Known RBP	11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	MSMB	P08118	114 aa		11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	RAB9A	P51151	201 aa		11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	TMEM213	A2RRL7	107 aa		11.92	□□□□□ -0.5
CELF4-223	ENST00000603232		B4DSR2	109 aa		11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	TGFA	P01135	160 aa		11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	HBD	P02042	147 aa		11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	CTSG	P08311	255 aa		11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	NDP	Q00604	133 aa		11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	MRPL51	Q4U2R6	128 aa	Known RBP	11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	PSMG4	Q5JS54	123 aa		11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	AMN1	Q8IY45	258 aa		11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	LINC01356	Q8N9X3	169 aa		11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	RABAC1	Q9UI14	185 aa		11.92	□□□□□ -0.5
CELF4-223	ENST00000603232	GAGE12B	A1L429	117 aa		11.91	□□□□□ -0.5
CELF4-223	ENST00000603232	HES1	Q14469	280 aa		11.91	□□□□□ -0.5
CELF4-223	ENST00000603232	BOD1L2	Q8IYS8	172 aa		11.91	□□□□□ -0.5
CELF4-223	ENST00000603232	FER1L6-AS1	Q8NA97	138 aa		11.91	□□□□□ -0.5
CELF4-223	ENST00000603232	ASCL2	Q99929	193 aa		11.91	□□□□□ -0.5
CELF4-223	ENST00000603232	HIF1AN	Q9NWT6	349 aa		11.91	□□□□□ -0.5
CELF4-223	ENST00000603232	C7orf71	A4D174	169 aa		11.9	□□□□□ -0.5
CELF4-223	ENST00000603232		H0Y8G0	127 aa		11.9	□□□□□ -0.5
CELF4-223	ENST00000603232	SIVA1	O15304	175 aa		11.9	□□□□□ -0.5
CELF4-223	ENST00000603232	IGHG4	P01861	327 aa		11.9	□□□□□ -0.5
CELF4-223	ENST00000603232	EGR2	P11161	476 aa	Predicted RBP	11.9	□□□□□ -0.5
CELF4-223	ENST00000603232	KLRD1	Q13241	179 aa		11.9	□□□□□ -0.5
CELF4-223	ENST00000603232	VMO1	Q7Z5L0	202 aa		11.9	□□□□□ -0.5
CELF4-223	ENST00000603232	PIFO	Q8TCI5	191 aa		11.9	□□□□□ -0.5
CELF4-223	ENST00000603232	TPPP3	Q9BW30	176 aa		11.9	□□□□□ -0.5
CELF4-223	ENST00000603232	SMAD5-AS1	Q9Y6J3	95 aa		11.9	□□□□□ -0.5
CELF4-223	ENST00000603232	RBAKDN	A6NC62	111 aa		11.9	□□□□□ -0.51
CELF4-223	ENST00000603232		H3BRM9	83 aa		11.9	□□□□□ -0.51
CELF4-223	ENST00000603232	ZNF575	Q86XF7	245 aa		11.9	□□□□□ -0.51
CELF4-223	ENST00000603232	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.89	□□□□□ -0.51
CELF4-223	ENST00000603232	IGKV2D-40	P01614	121 aa	Predicted RBP	11.89	□□□□□ -0.51
CELF4-223	ENST00000603232	LINC01559	Q495D7	138 aa		11.89	□□□□□ -0.51
CELF4-223	ENST00000603232		S4R3C0	116 aa		11.89	□□□□□ -0.51
CELF4-223	ENST00000603232	TEP1	Q99973	2627 aa	Known RBP	11.88	□□□□□ -0.51
CELF4-223	ENST00000603232	IGHV7-81	A0A0B4J1V7	117 aa		11.88	□□□□□ -0.51
CELF4-223	ENST00000603232	C9orf118	A6NHY6	69 aa		11.88	□□□□□ -0.51
CELF4-223	ENST00000603232	SNAI2	O43623	268 aa		11.88	□□□□□ -0.51
CELF4-223	ENST00000603232	AVP	P01185	164 aa		11.88	□□□□□ -0.51
CELF4-223	ENST00000603232	CKS2	P33552	79 aa		11.88	□□□□□ -0.51
CELF4-223	ENST00000603232	DYNAP	Q8N1N2	210 aa		11.88	□□□□□ -0.51
CELF4-223	ENST00000603232	OR9G4	Q8NGQ1	327 aa		11.88	□□□□□ -0.51
CELF4-223	ENST00000603232	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.88	□□□□□ -0.51
CELF4-223	ENST00000603232	ZFHX3	Q15911	3703 aa		11.87	□□□□□ -0.51
CELF4-223	ENST00000603232	FABP5P3	A8MUU1	101 aa		11.87	□□□□□ -0.51
CELF4-223	ENST00000603232	ZNF80	P51504	273 aa	Predicted RBP	11.87	□□□□□ -0.51
CELF4-223	ENST00000603232	ADAMTSL5	Q6ZMM2	481 aa		11.87	□□□□□ -0.51
CELF4-223	ENST00000603232	OR8A1	Q8NGG7	326 aa		11.87	□□□□□ -0.51
CELF4-223	ENST00000603232	JMJD8	Q96S16	334 aa		11.87	□□□□□ -0.51
CELF4-223	ENST00000603232	VGLL1	Q99990	258 aa		11.87	□□□□□ -0.51
CELF4-223	ENST00000603232	VPS25	Q9BRG1	176 aa		11.87	□□□□□ -0.51
CELF4-223	ENST00000603232	TMSB15B	A0A087X1C1	80 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	NCBP2L	A6PVI3	153 aa	Known RBP	11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	LY6G6D	O95868	133 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	NPY	P01303	97 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	TMEM11	P17152	192 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	SMIM15	Q7Z3B0	74 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232		Q8N9W7	124 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	ZNF502	Q8TBZ5	544 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	IFI27L1	Q96BM0	104 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	LOC389332	A0A1B0GUA5	103 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	TWIST1	Q15672	202 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	IL17REL	Q6ZVW7	336 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	RNF185	Q96GF1	192 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	SLC50A1	Q9BRV3	221 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	SIRPD	Q9H106	197 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	CSTL1	Q9H114	145 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	ZFAND3	Q9H8U3	227 aa		11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.86	□□□□□ -0.51
CELF4-223	ENST00000603232	ANK3	Q12955	4377 aa	Known RBP	11.85	□□□□□ -0.51
CELF4-223	ENST00000603232	MTOR	P42345	2549 aa		11.85	□□□□□ -0.51
CELF4-223	ENST00000603232	IGHV3OR16-10	A0A075B7F0	116 aa		11.85	□□□□□ -0.51
CELF4-223	ENST00000603232		K7ERU9	68 aa		11.85	□□□□□ -0.51
CELF4-223	ENST00000603232	BUB3	O43684	328 aa		11.85	□□□□□ -0.51
CELF4-223	ENST00000603232	YAE1D1	Q9NRH1	226 aa		11.85	□□□□□ -0.51
CELF4-223	ENST00000603232	GAGE10	A6NGK3	116 aa		11.84	□□□□□ -0.51
CELF4-223	ENST00000603232	CACNG7	P62955	275 aa		11.84	□□□□□ -0.51
CELF4-223	ENST00000603232	HSD52	Q0P140	79 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 425.8 ms