RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 NCOA6Q14686 2063 aaPredicted RBP8.68□□□□□ -1.02
ZNF558-207ENST00000601372 LTAP01374 205 aa8.68□□□□□ -1.02
ZNF558-207ENST00000601372 IGLL1P15814 213 aa8.68□□□□□ -1.02
ZNF558-207ENST00000601372 TNFRSF6BO95407 300 aa8.68□□□□□ -1.02
ZNF558-207ENST00000601372 CRPP02741 224 aa8.68□□□□□ -1.02
ZNF558-207ENST00000601372 IGLC1P0CG04 106 aa8.68□□□□□ -1.02
ZNF558-207ENST00000601372 MRPL51Q4U2R6 128 aaKnown RBP8.68□□□□□ -1.02
ZNF558-207ENST00000601372 C1orf229Q6ZS94 237 aaPredicted RBP8.68□□□□□ -1.02
ZNF558-207ENST00000601372 C8orf31Q8N9H6 132 aa8.68□□□□□ -1.02
ZNF558-207ENST00000601372 CLPSL1A2RUU4 121 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 SIRPDQ9H106 197 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 SUMO2P61956 95 aaKnown RBP8.67□□□□□ -1.02
ZNF558-207ENST00000601372 CFHR3Q02985 330 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 IGLC2P0DOY2 106 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 IGLC3P0DOY3 106 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 SRSF2Q01130 221 aaKnown RBP8.67□□□□□ -1.02
ZNF558-207ENST00000601372 TRAV2A0A0B4J234 112 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 PPP1R17O96001 155 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 LGALS1P09382 135 aaKnown RBP8.67□□□□□ -1.02
ZNF558-207ENST00000601372 BRWD1-AS2P59051 145 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 C5orf56Q8N8D9 126 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 MRAP2Q96G30 205 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 COX11Q9Y6N1 276 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 ORMDL2Q53FV1 153 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 IGF2BP2-AS1Q96M15 143 aa8.67□□□□□ -1.02
ZNF558-207ENST00000601372 KNCNA6PVL3 124 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 H3BUA1 57 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 LMO4P61968 165 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 KIR3DS1Q14943 382 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 OR2K2Q8NGT1 345 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 RNASE1P07998 156 aaKnown RBP8.66□□□□□ -1.02
ZNF558-207ENST00000601372 PATE2Q6UY27 113 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 TEX43Q6ZNM6 134 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 FAM231DQ6ZW35 169 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 CSTL1Q9H114 145 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 ADAMTS20P59510 1910 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 CYSLTR1Q9Y271 337 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 MALRD1Q5VYJ5 2156 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 CHD3Q12873 2000 aaKnown RBP8.66□□□□□ -1.02
ZNF558-207ENST00000601372 UBE2V1Q13404 147 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 POU2AF1Q16633 256 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 C11orf71Q6IPW1 123 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 LINC00477Q96M19 166 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 PTPRBP23467 1997 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 IGKV1OR2-108A0A075B7D4 117 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 PRSS46E5RG02 174 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 PSCAO43653 123 aa8.66□□□□□ -1.02
ZNF558-207ENST00000601372 COX6CP09669 75 aa8.65□□□□□ -1.02
ZNF558-207ENST00000601372 SPINK13Q1W4C9 94 aa8.65□□□□□ -1.02
ZNF558-207ENST00000601372 CITED2Q99967 270 aaPredicted RBP8.65□□□□□ -1.02
ZNF558-207ENST00000601372 DAD1P61803 113 aa8.65□□□□□ -1.02
ZNF558-207ENST00000601372 SEC11AP67812 179 aa8.65□□□□□ -1.02
ZNF558-207ENST00000601372 FAM104BQ5XKR9 115 aa8.65□□□□□ -1.02
ZNF558-207ENST00000601372 SIGLEC8Q9NYZ4 499 aa8.65□□□□□ -1.02
ZNF558-207ENST00000601372 KRTAP10-9P60411 292 aa8.65□□□□□ -1.03
ZNF558-207ENST00000601372 VCX2Q9H322 139 aa8.65□□□□□ -1.03
ZNF558-207ENST00000601372 TMEM14CQ9P0S9 112 aa8.65□□□□□ -1.03
ZNF558-207ENST00000601372 SPRY2O43597 315 aa8.65□□□□□ -1.03
ZNF558-207ENST00000601372 IGLV2-23P01705 113 aa8.65□□□□□ -1.03
ZNF558-207ENST00000601372 MRPS16Q9Y3D3 137 aaKnown RBP8.65□□□□□ -1.03
ZNF558-207ENST00000601372 MALP21145 153 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 SMR3AQ99954 134 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 PDE6HQ13956 83 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 F5H768 121 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 CD28P10747 220 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 LINC00173Q6ZV60 143 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 GP9P14770 177 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 CT83Q5H943 113 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 NPBQ8NG41 125 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 PYGO2Q9BRQ0 406 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 MRPL36Q9P0J6 103 aaKnown RBP8.64□□□□□ -1.03
ZNF558-207ENST00000601372 IGHV7-81A0A0B4J1V7 117 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 IGHV7-4-1A0A0J9YVY3 117 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 ZNF491Q8N8L2 437 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 PRR25Q96S07 402 aa8.64□□□□□ -1.03
ZNF558-207ENST00000601372 NPYP01303 97 aa8.63□□□□□ -1.03
ZNF558-207ENST00000601372 CIRBPQ14011 172 aaKnown RBP8.63□□□□□ -1.03
ZNF558-207ENST00000601372 ZNF479Q96JC4 524 aa8.63□□□□□ -1.03
ZNF558-207ENST00000601372 DPH3P1Q9H4G8 78 aa8.63□□□□□ -1.03
ZNF558-207ENST00000601372 KIAA1549Q9HCM3 1950 aa8.63□□□□□ -1.03
ZNF558-207ENST00000601372 SHANK1Q9Y566 2161 aa8.63□□□□□ -1.03
ZNF558-207ENST00000601372 TNRC6BQ9UPQ9 1833 aaKnown RBP8.63□□□□□ -1.03
ZNF558-207ENST00000601372 NEGR1Q7Z3B1 354 aa8.63□□□□□ -1.03
ZNF558-207ENST00000601372 CHCHD5Q9BSY4 110 aa8.63□□□□□ -1.03
ZNF558-207ENST00000601372 ZC2HC1BQ5TFG8 222 aa8.63□□□□□ -1.03
ZNF558-207ENST00000601372 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.63□□□□□ -1.032e-8■■■■□ 19.6
ZNF558-207ENST00000601372 CPAMD8Q8IZJ3 1885 aa8.63□□□□□ -1.03
ZNF558-207ENST00000601372 A0A0U1RRA0 63 aa8.63□□□□□ -1.03
ZNF558-207ENST00000601372 Q8N9W7 124 aa8.63□□□□□ -1.03
ZNF558-207ENST00000601372 MRPL52Q86TS9 123 aaKnown RBP8.62□□□□□ -1.03
ZNF558-207ENST00000601372 CHAC1Q9BUX1 264 aa8.62□□□□□ -1.03
ZNF558-207ENST00000601372 CREBBPQ92793 2442 aa8.62□□□□□ -1.03
ZNF558-207ENST00000601372 IGHV4OR15-8A0A075B7B6 117 aa8.62□□□□□ -1.03
ZNF558-207ENST00000601372 A0A087WW49 117 aa8.62□□□□□ -1.03
ZNF558-207ENST00000601372 FAM231BA6NCW3 169 aa8.62□□□□□ -1.03
ZNF558-207ENST00000601372 KLK9Q9UKQ9 250 aa8.62□□□□□ -1.03
ZNF558-207ENST00000601372 FAM167A-AS1Q96KT0 104 aa8.62□□□□□ -1.03
ZNF558-207ENST00000601372 TRAV12-2A0A075B6T6 113 aa8.62□□□□□ -1.03
ZNF558-207ENST00000601372 P0C879 139 aa8.61□□□□□ -1.03
ZNF558-207ENST00000601372 DYNAPQ8N1N2 210 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms