RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 SORL1Q92673 2214 aa11.44□□□□□ -0.58
HIF3A-218ENST00000600383 XKRY2A2RUG3 117 aa11.43□□□□□ -0.58
HIF3A-218ENST00000600383 FABP5P3A8MUU1 101 aa11.43□□□□□ -0.58
HIF3A-218ENST00000600383 OVOL1O14753 267 aa11.43□□□□□ -0.58
HIF3A-218ENST00000600383 ORM1P02763 201 aa11.43□□□□□ -0.58
HIF3A-218ENST00000600383 GFI1BQ5VTD9 330 aa11.43□□□□□ -0.58
HIF3A-218ENST00000600383 WDR73Q6P4I2 378 aa11.43□□□□□ -0.58
HIF3A-218ENST00000600383 ADAMTSL5Q6ZMM2 481 aa11.43□□□□□ -0.58
HIF3A-218ENST00000600383 TMEM136Q6ZRR5 245 aa11.43□□□□□ -0.58
HIF3A-218ENST00000600383 COX8CQ7Z4L0 72 aa11.43□□□□□ -0.58
HIF3A-218ENST00000600383 LINC00469Q8N7U9 141 aa11.43□□□□□ -0.58
HIF3A-218ENST00000600383 OR9G4Q8NGQ1 327 aa11.43□□□□□ -0.58
HIF3A-218ENST00000600383 RNF114Q9Y508 228 aa11.43□□□□□ -0.58
HIF3A-218ENST00000600383 ZNF688P0C7X2 276 aa11.42□□□□□ -0.58
HIF3A-218ENST00000600383 KIAA1644Q3SXP7 199 aa11.42□□□□□ -0.58
HIF3A-218ENST00000600383 RAX2Q96IS3 184 aa11.42□□□□□ -0.58
HIF3A-218ENST00000600383 PEMTQ9UBM1 199 aa11.42□□□□□ -0.58
HIF3A-218ENST00000600383 OR8A1Q8NGG7 326 aa11.42□□□□□ -0.58
HIF3A-218ENST00000600383 NIT2Q9NQR4 276 aa11.42□□□□□ -0.58
HIF3A-218ENST00000600383 NSD1Q96L73 2696 aaPredicted RBP11.41□□□□□ -0.58
HIF3A-218ENST00000600383 FAM231BA6NCW3 169 aa11.41□□□□□ -0.58
HIF3A-218ENST00000600383 HOXA5P20719 270 aa11.41□□□□□ -0.58
HIF3A-218ENST00000600383 PSMG4Q5JS54 123 aa11.41□□□□□ -0.58
HIF3A-218ENST00000600383 LINC00477Q96M19 166 aa11.41□□□□□ -0.58
HIF3A-218ENST00000600383 SSBP4Q9BWG4 385 aaPredicted RBP11.41□□□□□ -0.58
HIF3A-218ENST00000600383 GRIFINA4D1Z8 144 aa11.41□□□□□ -0.58
HIF3A-218ENST00000600383 MT-ND6P03923 174 aa11.41□□□□□ -0.58
HIF3A-218ENST00000600383 CD33P20138 364 aa11.41□□□□□ -0.58
HIF3A-218ENST00000600383 COX19Q49B96 90 aa11.41□□□□□ -0.58
HIF3A-218ENST00000600383 TSSC4Q9Y5U2 329 aaPredicted RBP11.41□□□□□ -0.58
HIF3A-218ENST00000600383 FN1P02751 2386 aaKnown RBP11.41□□□□□ -0.58
HIF3A-218ENST00000600383 CCL24O00175 119 aa11.4□□□□□ -0.58
HIF3A-218ENST00000600383 TCF21O43680 179 aa11.4□□□□□ -0.58
HIF3A-218ENST00000600383 HLA-DQA1P01909 254 aa11.4□□□□□ -0.58
HIF3A-218ENST00000600383 SNRPD3P62318 126 aaKnown RBP11.4□□□□□ -0.58
HIF3A-218ENST00000600383 GDF5OSQ5U4N7 250 aa11.4□□□□□ -0.58
HIF3A-218ENST00000600383 Q6ZQT7 251 aa11.4□□□□□ -0.58
HIF3A-218ENST00000600383 WFDC12Q8WWY7 111 aa11.4□□□□□ -0.58
HIF3A-218ENST00000600383 MUC21A0A0G2JKD1 596 aa11.39□□□□□ -0.59
HIF3A-218ENST00000600383 MUC21A0A140T8X8 626 aa11.39□□□□□ -0.59
HIF3A-218ENST00000600383 APCSP02743 223 aa11.39□□□□□ -0.59
HIF3A-218ENST00000600383 FOSL1P15407 271 aa11.39□□□□□ -0.59
HIF3A-218ENST00000600383 PAFAH1B2P68402 229 aa11.39□□□□□ -0.59
HIF3A-218ENST00000600383 HBBP68871 147 aa11.39□□□□□ -0.59
HIF3A-218ENST00000600383 MUC21Q5SSG8 566 aa11.39□□□□□ -0.59
HIF3A-218ENST00000600383 ATP5L2Q7Z4Y8 100 aa11.39□□□□□ -0.59
HIF3A-218ENST00000600383 ARMS2P0C7Q2 107 aa11.39□□□□□ -0.59
HIF3A-218ENST00000600383 FOXA3P55318 350 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-218ENST00000600383 SLAQ13239 276 aa11.39□□□□□ -0.59
HIF3A-218ENST00000600383 SAMD13Q5VXD3 122 aa11.39□□□□□ -0.59
HIF3A-218ENST00000600383 RASL11AQ6T310 242 aa11.39□□□□□ -0.59
HIF3A-218ENST00000600383 K7EQG2 157 aa11.38□□□□□ -0.59
HIF3A-218ENST00000600383 LYZL1Q6UWQ5 148 aa11.38□□□□□ -0.59
HIF3A-218ENST00000600383 DYNLRB2Q8TF09 96 aa11.38□□□□□ -0.59
HIF3A-218ENST00000600383 PPP1R14DQ9NXH3 145 aa11.38□□□□□ -0.59
HIF3A-218ENST00000600383 A0A1B0GUS0 222 aa11.38□□□□□ -0.59
HIF3A-218ENST00000600383 A0A1B0GUT8 65 aa11.38□□□□□ -0.59
HIF3A-218ENST00000600383 A0A1B0GXF2 115 aa11.38□□□□□ -0.59
HIF3A-218ENST00000600383 NDUFA7O95182 113 aa11.38□□□□□ -0.59
HIF3A-218ENST00000600383 GPX1P07203 203 aa11.38□□□□□ -0.59
HIF3A-218ENST00000600383 CSN3P07498 182 aa11.38□□□□□ -0.59
HIF3A-218ENST00000600383 CRISP2P16562 243 aa11.38□□□□□ -0.59
HIF3A-218ENST00000600383 PRR9Q5T870 116 aa11.38□□□□□ -0.59
HIF3A-218ENST00000600383 IGKV3-20P01619 116 aa11.37□□□□□ -0.59
HIF3A-218ENST00000600383 NSUN5P1Q3KNT7 163 aa11.37□□□□□ -0.59
HIF3A-218ENST00000600383 C11orf21Q9P2W6 132 aa11.37□□□□□ -0.59
HIF3A-218ENST00000600383 S100A2P29034 98 aa11.36□□□□□ -0.59
HIF3A-218ENST00000600383 RNASE4P34096 147 aaKnown RBP11.36□□□□□ -0.59
HIF3A-218ENST00000600383 PROK1P58294 105 aa11.36□□□□□ -0.59
HIF3A-218ENST00000600383 KIR3DS1Q14943 382 aa11.36□□□□□ -0.59
HIF3A-218ENST00000600383 BORCS7Q96B45 105 aa11.36□□□□□ -0.59
HIF3A-218ENST00000600383 LENEPQ9Y5L5 61 aa11.36□□□□□ -0.59
HIF3A-218ENST00000600383 IGKV3D-20A0A0C4DH25 116 aa11.36□□□□□ -0.59
HIF3A-218ENST00000600383 IFITM10A6NMD0 228 aa11.36□□□□□ -0.59
HIF3A-218ENST00000600383 RPS20P60866 119 aaKnown RBP11.36□□□□□ -0.59
HIF3A-218ENST00000600383 ZNF575Q86XF7 245 aa11.36□□□□□ -0.59
HIF3A-218ENST00000600383 TMEM61Q8N0U2 210 aa11.36□□□□□ -0.59
HIF3A-218ENST00000600383 HIST3H2BBQ8N257 126 aa11.36□□□□□ -0.59
HIF3A-218ENST00000600383 ZFAND2AQ8N6M9 145 aa11.36□□□□□ -0.59
HIF3A-218ENST00000600383 NAGKQ9UJ70 344 aa11.36□□□□□ -0.59
HIF3A-218ENST00000600383 SRIP30626 198 aa11.35□□□□□ -0.59
HIF3A-218ENST00000600383 RIGQ13278 110 aa11.35□□□□□ -0.59
HIF3A-218ENST00000600383 Q6AWC8 147 aa11.35□□□□□ -0.59
HIF3A-218ENST00000600383 FER1L6-AS1Q8NA97 138 aa11.35□□□□□ -0.59
HIF3A-218ENST00000600383 C2CD3Q4AC94 2353 aa11.35□□□□□ -0.59
HIF3A-218ENST00000600383 CRLF1O75462 422 aa11.35□□□□□ -0.59
HIF3A-218ENST00000600383 FHL3Q13643 280 aa11.35□□□□□ -0.59
HIF3A-218ENST00000600383 LINC01559Q495D7 138 aa11.35□□□□□ -0.59
HIF3A-218ENST00000600383 EBLN2Q6P2I7 272 aa11.35□□□□□ -0.59
HIF3A-218ENST00000600383 TMEM256Q8N2U0 113 aa11.35□□□□□ -0.59
HIF3A-218ENST00000600383 F8P00451 2351 aa11.34□□□□□ -0.59
HIF3A-218ENST00000600383 AGRNO00468 2067 aa11.34□□□□□ -0.59
HIF3A-218ENST00000600383 FABP4P15090 132 aa11.34□□□□□ -0.59
HIF3A-218ENST00000600383 DEFB114Q30KQ6 69 aa11.34□□□□□ -0.59
HIF3A-218ENST00000600383 CD300EQ496F6 205 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-218ENST00000600383 BAGE3Q86Y29 109 aa11.34□□□□□ -0.59
HIF3A-218ENST00000600383 F2Z2F3 143 aa11.33□□□□□ -0.6
HIF3A-218ENST00000600383 TWIST1Q15672 202 aa11.33□□□□□ -0.6
HIF3A-218ENST00000600383 COA6Q5JTJ3 125 aaKnown RBP11.33□□□□□ -0.6
HIF3A-218ENST00000600383 A0A0J9YX75 114 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms