RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 DNAH10OSP0CZ25 163 aa14.36□□□□□ -0.11
PNKP-212ENST00000599454 EVI2AP22794 236 aa14.36□□□□□ -0.11
PNKP-212ENST00000599454 SRIP30626 198 aa14.36□□□□□ -0.11
PNKP-212ENST00000599454 ZNF138P52744 262 aa14.36□□□□□ -0.11
PNKP-212ENST00000599454 NPCDR1Q9BY65 106 aa14.36□□□□□ -0.11
PNKP-212ENST00000599454 PLA2G10O15496 165 aa14.35□□□□□ -0.11
PNKP-212ENST00000599454 KRTAP10-1P60331 282 aa14.35□□□□□ -0.11
PNKP-212ENST00000599454 IL15RAQ13261 267 aa14.35□□□□□ -0.11
PNKP-212ENST00000599454 RAB32Q13637 225 aa14.35□□□□□ -0.11
PNKP-212ENST00000599454 PCNPQ8WW12 178 aaKnown RBP14.35□□□□□ -0.11
PNKP-212ENST00000599454 FAM167A-AS1Q96KT0 104 aa14.35□□□□□ -0.11
PNKP-212ENST00000599454 SEC22CQ9BRL7 303 aa14.35□□□□□ -0.11
PNKP-212ENST00000599454 FLG2Q5D862 2391 aaPredicted RBP14.35□□□□□ -0.11
PNKP-212ENST00000599454 TRAV6A0A075B6T7 132 aa14.34□□□□□ -0.11
PNKP-212ENST00000599454 K7EQD1 137 aa14.34□□□□□ -0.11
PNKP-212ENST00000599454 ORM1P02763 201 aa14.34□□□□□ -0.11
PNKP-212ENST00000599454 GCSAMLQ5JQS6 135 aa14.34□□□□□ -0.11
PNKP-212ENST00000599454 Q6ZQT7 251 aa14.34□□□□□ -0.11
PNKP-212ENST00000599454 OR10G4Q8NGN3 311 aa14.34□□□□□ -0.11
PNKP-212ENST00000599454 OR51M1Q9H341 326 aa14.34□□□□□ -0.11
PNKP-212ENST00000599454 RBAKDNA6NC62 111 aa14.33□□□□□ -0.12
PNKP-212ENST00000599454 E5RGE8 158 aa14.33□□□□□ -0.12
PNKP-212ENST00000599454 ZNF266Q14584 549 aa14.33□□□□□ -0.12
PNKP-212ENST00000599454 MIR17HGQ75NE6 70 aa14.33□□□□□ -0.12
PNKP-212ENST00000599454 C10orf126Q8N4M7 172 aa14.33□□□□□ -0.12
PNKP-212ENST00000599454 SPXQ9BT56 116 aa14.33□□□□□ -0.12
PNKP-212ENST00000599454 NUDT15Q9NV35 164 aa14.33□□□□□ -0.12
PNKP-212ENST00000599454 GCSHP23434 173 aa14.32□□□□□ -0.12
PNKP-212ENST00000599454 CSN1S1P47710 185 aa14.32□□□□□ -0.12
PNKP-212ENST00000599454 WFDC10BQ8IUB3 73 aa14.32□□□□□ -0.12
PNKP-212ENST00000599454 RASL10AQ92737 203 aa14.32□□□□□ -0.12
PNKP-212ENST00000599454 TXNDC17Q9BRA2 123 aa14.32□□□□□ -0.12
PNKP-212ENST00000599454 PAXXQ9BUH6 204 aa14.32□□□□□ -0.12
PNKP-212ENST00000599454 KCNIP2Q9NS61 270 aa14.32□□□□□ -0.12
PNKP-212ENST00000599454 FAT1Q14517 4588 aa14.32□□□□□ -0.12
PNKP-212ENST00000599454 GYPEP15421 78 aa14.31□□□□□ -0.12
PNKP-212ENST00000599454 Q8TAT8 98 aa14.31□□□□□ -0.12
PNKP-212ENST00000599454 FXYD5Q96DB9 178 aa14.31□□□□□ -0.12
PNKP-212ENST00000599454 LENEPQ9Y5L5 61 aa14.31□□□□□ -0.12
PNKP-212ENST00000599454 TRGV11A0A075B6L2 103 aa14.3□□□□□ -0.12
PNKP-212ENST00000599454 MUC21Q5SSG8 566 aa14.3□□□□□ -0.12
PNKP-212ENST00000599454 ZNF479Q96JC4 524 aa14.3□□□□□ -0.12
PNKP-212ENST00000599454 MDFICQ9P1T7 246 aa14.3□□□□□ -0.12
PNKP-212ENST00000599454 VPS13BQ7Z7G8 4022 aa14.3□□□□□ -0.12
PNKP-212ENST00000599454 C9JCJ5 164 aa14.29□□□□□ -0.12
PNKP-212ENST00000599454 H2AFB2P0C5Z0 115 aa14.29□□□□□ -0.12
PNKP-212ENST00000599454 SFTA3P0C7M3 94 aa14.29□□□□□ -0.12
PNKP-212ENST00000599454 Q6AWC8 147 aa14.29□□□□□ -0.12
PNKP-212ENST00000599454 FAM159AQ6UWV7 190 aa14.29□□□□□ -0.12
PNKP-212ENST00000599454 SH2D6Q7Z4S9 175 aa14.29□□□□□ -0.12
PNKP-212ENST00000599454 OR5C1Q8NGR4 320 aa14.29□□□□□ -0.12
PNKP-212ENST00000599454 THAP6Q8TBB0 222 aa14.29□□□□□ -0.12
PNKP-212ENST00000599454 PHYHIPLQ96FC7 376 aa14.29□□□□□ -0.12
PNKP-212ENST00000599454 SLC25A31Q9H0C2 315 aa14.29□□□□□ -0.12
PNKP-212ENST00000599454 CRYGDP07320 174 aa14.28□□□□□ -0.12
PNKP-212ENST00000599454 OR10J4P0C629 311 aa14.28□□□□□ -0.12
PNKP-212ENST00000599454 TRAV4A0A0B4J268 109 aa14.27□□□□□ -0.13
PNKP-212ENST00000599454 FAM229AH3BQW9 127 aa14.27□□□□□ -0.13
PNKP-212ENST00000599454 NHLH2Q02577 135 aa14.27□□□□□ -0.13
PNKP-212ENST00000599454 TMEM183BQ1AE95 376 aa14.27□□□□□ -0.13
PNKP-212ENST00000599454 TMEM183AQ8IXX5 376 aa14.27□□□□□ -0.13
PNKP-212ENST00000599454 NTN5Q8WTR8 489 aaPredicted RBP14.27□□□□□ -0.13
PNKP-212ENST00000599454 TIRAPP58753 221 aa14.26□□□□□ -0.13
PNKP-212ENST00000599454 TMED6Q8WW62 240 aa14.26□□□□□ -0.13
PNKP-212ENST00000599454 TMEM70Q9BUB7 260 aa14.26□□□□□ -0.13
PNKP-212ENST00000599454 BOLA1Q9Y3E2 137 aa14.26□□□□□ -0.13
PNKP-212ENST00000599454 C17orf112F2Z3M2 114 aa14.25□□□□□ -0.13
PNKP-212ENST00000599454 OR7C2O60412 319 aa14.25□□□□□ -0.13
PNKP-212ENST00000599454 SMR3BP02814 79 aaPredicted RBP14.25□□□□□ -0.13
PNKP-212ENST00000599454 RANP62826 216 aaKnown RBP14.25□□□□□ -0.13
PNKP-212ENST00000599454 TDRG1Q3Y452 100 aa14.25□□□□□ -0.13
PNKP-212ENST00000599454 WDR61Q9GZS3 305 aaKnown RBP14.25□□□□□ -0.13
PNKP-212ENST00000599454 SRRM2Q9UQ35 2752 aaKnown RBP14.24□□□□□ -0.13
PNKP-212ENST00000599454 PSCAO43653 123 aa14.24□□□□□ -0.13
PNKP-212ENST00000599454 OR4C5Q8NGB2 326 aa14.24□□□□□ -0.13
PNKP-212ENST00000599454 IGLV5-52A0A0A0MRZ9 124 aa14.23□□□□□ -0.13
PNKP-212ENST00000599454 IGHV3-38A0A0C4DH36 116 aa14.23□□□□□ -0.13
PNKP-212ENST00000599454 FAM240BA0A1B0GVZ2 78 aa14.23□□□□□ -0.13
PNKP-212ENST00000599454 DIRC3C9JPN6 131 aa14.23□□□□□ -0.13
PNKP-212ENST00000599454 M0R2P5 195 aa14.23□□□□□ -0.13
PNKP-212ENST00000599454 UBE2L3P68036 154 aaKnown RBP14.23□□□□□ -0.13
PNKP-212ENST00000599454 CCDC32Q9BV29 185 aa14.23□□□□□ -0.13
PNKP-212ENST00000599454 LRCOL1A6NCL2 159 aa14.22□□□□□ -0.13
PNKP-212ENST00000599454 LINC01556Q5JQF7 62 aa14.22□□□□□ -0.13
PNKP-212ENST00000599454 Q6ZSN1 163 aa14.22□□□□□ -0.13
PNKP-212ENST00000599454 PPT1P50897 306 aa14.21□□□□□ -0.13
PNKP-212ENST00000599454 KHDC3LQ587J8 217 aa14.21□□□□□ -0.13
PNKP-212ENST00000599454 NHLRC2Q8NBF2 726 aa14.21□□□□□ -0.13
PNKP-212ENST00000599454 NAGKQ9UJ70 344 aa14.21□□□□□ -0.13
PNKP-212ENST00000599454 MYCBP2O75592 4640 aa14.21□□□□□ -0.14
PNKP-212ENST00000599454 TAS2R45P59539 299 aa14.2□□□□□ -0.14
PNKP-212ENST00000599454 NMES1Q9C002 83 aa14.2□□□□□ -0.14
PNKP-212ENST00000599454 IGHV3-16A0A0C4DH30 117 aa14.19□□□□□ -0.14
PNKP-212ENST00000599454 IBA57-AS1B1ANH7 110 aa14.19□□□□□ -0.14
PNKP-212ENST00000599454 GATA1P15976 413 aaPredicted RBP14.19□□□□□ -0.14
PNKP-212ENST00000599454 MZT2BQ6NZ67 158 aa14.19□□□□□ -0.14
PNKP-212ENST00000599454 CMTM2Q8TAZ6 248 aa14.19□□□□□ -0.14
PNKP-212ENST00000599454 OR5AC2Q9NZP5 309 aa14.19□□□□□ -0.14
PNKP-212ENST00000599454 TRAV8-6A0A0B4J262 113 aa14.18□□□□□ -0.14
PNKP-212ENST00000599454 TRAV21A0A0B4J279 112 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms