RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 ODF3Q96PU9 254 aa7.44□□□□□ -1.22
VRK3-214ENST00000598553 VGLL1Q99990 258 aa7.44□□□□□ -1.22
VRK3-214ENST00000598553 SMIM3Q9BZL3 60 aa7.44□□□□□ -1.22
VRK3-214ENST00000598553 WDR61Q9GZS3 305 aaKnown RBP7.44□□□□□ -1.22
VRK3-214ENST00000598553 AGPAT4-IT1Q9H0P7 198 aa7.44□□□□□ -1.22
VRK3-214ENST00000598553 WFDC1Q9HC57 220 aa7.44□□□□□ -1.22
VRK3-214ENST00000598553 TMEM14CQ9P0S9 112 aa7.44□□□□□ -1.22
VRK3-214ENST00000598553 TIMM8BQ9Y5J9 83 aaPredicted RBP7.44□□□□□ -1.22
VRK3-214ENST00000598553 NUDT3O95989 172 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 ATP5G1P05496 136 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 OR10J4P0C629 311 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 LEPP41159 167 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 ATP5G3P48201 142 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 RAB2AP61019 212 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 PDE6HQ13956 83 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 ICAM4Q14773 271 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 FAM122CQ6P4D5 195 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 C11orf72Q8NBR9 251 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 Q8TAT8 98 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 FXYD5Q96DB9 178 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 KRTAP1-5Q9BYS1 174 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 TP53TG3Q9ULZ0 132 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 LINC00588Q9Y4M8 146 aa7.43□□□□□ -1.22
VRK3-214ENST00000598553 PKD1P98161 4303 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 A0A0J9YY99 117 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 GAGE12BA1L429 117 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 CBY3A6NI87 242 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 KLLNB2CW77 178 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 GAGE7O76087 117 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 GAGE12FP0CL80 117 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 GAGE12GP0CL81 117 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 GAGE12IP0CL82 117 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 HIST1H1EP10412 219 aaKnown RBP7.42□□□□□ -1.22
VRK3-214ENST00000598553 FAM3BP58499 235 aaPredicted RBP7.42□□□□□ -1.22
VRK3-214ENST00000598553 ATRAIDQ6UW56 229 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 Q6ZTI0 123 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 ZNF575Q86XF7 245 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 ZFAND2AQ8N6M9 145 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 ZNRF2Q8NHG8 242 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 TMPRSS5Q9H3S3 457 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 PRELID1Q9Y255 219 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 KIAA1109Q2LD37 5005 aa7.42□□□□□ -1.22
VRK3-214ENST00000598553 ZNF324O75467 553 aaPredicted RBP7.41□□□□□ -1.22
VRK3-214ENST00000598553 IFNA5P01569 189 aa7.41□□□□□ -1.22
VRK3-214ENST00000598553 H2AFB1P0C5Y9 115 aa7.41□□□□□ -1.22
VRK3-214ENST00000598553 SFTA3P0C7M3 94 aa7.41□□□□□ -1.22
VRK3-214ENST00000598553 ADCYAP1P18509 176 aa7.41□□□□□ -1.22
VRK3-214ENST00000598553 FLI1Q01543 452 aaPredicted RBP7.41□□□□□ -1.22
VRK3-214ENST00000598553 OR2G3Q8NGZ4 309 aa7.41□□□□□ -1.22
VRK3-214ENST00000598553 ATP5SQ99766 215 aa7.41□□□□□ -1.22
VRK3-214ENST00000598553 GSN-AS1Q9NRJ2 163 aa7.41□□□□□ -1.22
VRK3-214ENST00000598553 KCNIP2Q9NS61 270 aa7.41□□□□□ -1.22
VRK3-214ENST00000598553 KLF12Q9Y4X4 402 aa7.41□□□□□ -1.22
VRK3-214ENST00000598553 TIMM9Q9Y5J7 89 aa7.41□□□□□ -1.22
VRK3-214ENST00000598553 DNAH11Q96DT5 4516 aa7.4□□□□□ -1.22
VRK3-214ENST00000598553 TRAV26-1A0A087WT03 109 aa7.4□□□□□ -1.22
VRK3-214ENST00000598553 C7orf71A4D174 169 aa7.4□□□□□ -1.22
VRK3-214ENST00000598553 TNP2Q05952 138 aa7.4□□□□□ -1.22
VRK3-214ENST00000598553 HSD17B11Q8NBQ5 300 aa7.4□□□□□ -1.22
VRK3-214ENST00000598553 PYGO2Q9BRQ0 406 aa7.4□□□□□ -1.22
VRK3-214ENST00000598553 ATG101Q9BSB4 218 aa7.4□□□□□ -1.22
VRK3-214ENST00000598553 MRPL32Q9BYC8 188 aaKnown RBP7.4□□□□□ -1.22
VRK3-214ENST00000598553 FAM74A7A6NL05 159 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 SNURFLB1AK76 121 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 SLC25A5P05141 298 aaKnown RBP7.39□□□□□ -1.23
VRK3-214ENST00000598553 NBEAP1P0C6P0 100 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 ATP6V0CP27449 155 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 RNASE4P34096 147 aaKnown RBP7.39□□□□□ -1.23
VRK3-214ENST00000598553 SRSF3P84103 164 aaKnown RBP7.39□□□□□ -1.23
VRK3-214ENST00000598553 OR5I1Q13606 314 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 FAM74A3Q4VXF1 159 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 FFAR4Q5NUL3 377 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 AKR1C8PQ5T2L2 129 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 C9orf47Q6ZRZ4 202 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 FAM213BQ8TBF2 198 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 SCGB1C1Q8TD33 95 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 VSIG2Q96IQ7 327 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 LINC00477Q96M19 166 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 PAXXQ9BUH6 204 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 EIF5A2Q9GZV4 153 aaKnown RBP7.39□□□□□ -1.23
VRK3-214ENST00000598553 OR51M1Q9H341 326 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 AAMDCQ9H7C9 122 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 SMCO4Q9NRQ5 59 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 FUT9Q9Y231 359 aa7.39□□□□□ -1.23
VRK3-214ENST00000598553 C17orf112F2Z3M2 114 aa7.38□□□□□ -1.23
VRK3-214ENST00000598553 CRISP2P16562 243 aa7.38□□□□□ -1.23
VRK3-214ENST00000598553 DAZ2Q13117 558 aaKnown RBP7.38□□□□□ -1.23
VRK3-214ENST00000598553 LINC00467Q9BRT7 94 aa7.38□□□□□ -1.23
VRK3-214ENST00000598553 MRPL16Q9NX20 251 aaKnown RBP7.38□□□□□ -1.23
VRK3-214ENST00000598553 ZNF492Q9P255 531 aa7.38□□□□□ -1.23
VRK3-214ENST00000598553 TRAV1-1A0A0B4J248 108 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 NBDYA0A0U1RRE5 68 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 HMGB3O15347 200 aaKnown RBP7.37□□□□□ -1.23
VRK3-214ENST00000598553 OR7C2O60412 319 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 IGHV3-53P01767 116 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 PPT1P50897 306 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 CCL18P55774 89 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 RANP62826 216 aaKnown RBP7.37□□□□□ -1.23
VRK3-214ENST00000598553 ESRGQ1W209 222 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 SOHLH1Q5JUK2 328 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms