RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 A0A1W2PPV4 95 aa12.44□□□□□ -0.42
CHMP2A-203ENST00000597209 FAM74A1Q5RGS3 127 aa12.44□□□□□ -0.42
CHMP2A-203ENST00000597209 Q6AWC8 147 aa12.44□□□□□ -0.42
CHMP2A-203ENST00000597209 UPK3BQ9BT76 320 aa12.44□□□□□ -0.42
CHMP2A-203ENST00000597209 Q9H8V8 135 aa12.44□□□□□ -0.42
CHMP2A-203ENST00000597209 TP53TG3Q9ULZ0 132 aa12.44□□□□□ -0.42
CHMP2A-203ENST00000597209 Q6ZQT7 251 aa12.43□□□□□ -0.42
CHMP2A-203ENST00000597209 VSIG2Q96IQ7 327 aa12.43□□□□□ -0.42
CHMP2A-203ENST00000597209 AQP10Q96PS8 301 aa12.43□□□□□ -0.42
CHMP2A-203ENST00000597209 ARPC5LQ9BPX5 153 aa12.43□□□□□ -0.42
CHMP2A-203ENST00000597209 MED28Q9H204 178 aa12.43□□□□□ -0.42
CHMP2A-203ENST00000597209 PKD1P98161 4303 aa12.43□□□□□ -0.42
CHMP2A-203ENST00000597209 PGPA6NDG6 321 aa12.42□□□□□ -0.42
CHMP2A-203ENST00000597209 RAB2AP61019 212 aa12.42□□□□□ -0.42
CHMP2A-203ENST00000597209 ESRGQ1W209 222 aa12.42□□□□□ -0.42
CHMP2A-203ENST00000597209 C6orf223Q8N319 242 aa12.42□□□□□ -0.42
CHMP2A-203ENST00000597209 OR10G4Q8NGN3 311 aa12.42□□□□□ -0.42
CHMP2A-203ENST00000597209 OR10G9Q8NGN4 311 aa12.42□□□□□ -0.42
CHMP2A-203ENST00000597209 OR10G7Q8NGN6 311 aa12.42□□□□□ -0.42
CHMP2A-203ENST00000597209 OR2G3Q8NGZ4 309 aa12.42□□□□□ -0.42
CHMP2A-203ENST00000597209 CMTM2Q8TAZ6 248 aa12.42□□□□□ -0.42
CHMP2A-203ENST00000597209 ASB13Q8WXK3 278 aa12.42□□□□□ -0.42
CHMP2A-203ENST00000597209 ST6GAL2Q96JF0 529 aa12.42□□□□□ -0.42
CHMP2A-203ENST00000597209 A0A096LPF7 62 aa12.41□□□□□ -0.42
CHMP2A-203ENST00000597209 ZNF415Q09FC8 603 aa12.41□□□□□ -0.42
CHMP2A-203ENST00000597209 PSMG3Q9BT73 122 aaPredicted RBP12.41□□□□□ -0.42
CHMP2A-203ENST00000597209 MRPS16Q9Y3D3 137 aaKnown RBP12.41□□□□□ -0.42
CHMP2A-203ENST00000597209 KIAA1109Q2LD37 5005 aa12.4□□□□□ -0.42
CHMP2A-203ENST00000597209 EIF3GO75821 320 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHMP2A-203ENST00000597209 MED14OSP0DP75 135 aa12.4□□□□□ -0.42
CHMP2A-203ENST00000597209 SLAQ13239 276 aa12.4□□□□□ -0.42
CHMP2A-203ENST00000597209 TTC32Q5I0X7 151 aa12.4□□□□□ -0.42
CHMP2A-203ENST00000597209 HYLS1Q96M11 299 aa12.4□□□□□ -0.42
CHMP2A-203ENST00000597209 A0A1W2PPQ1 181 aa12.39□□□□□ -0.43
CHMP2A-203ENST00000597209 TDRG1Q3Y452 100 aa12.39□□□□□ -0.43
CHMP2A-203ENST00000597209 SPXQ9BT56 116 aa12.39□□□□□ -0.43
CHMP2A-203ENST00000597209 MRPL16Q9NX20 251 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-203ENST00000597209 DNAH11Q96DT5 4516 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 TRGV11A0A075B6L2 103 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 MBP02144 154 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 GIPP09681 153 aaPredicted RBP12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 STAG3L2P0CL84 134 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 STAG3L3P0CL85 134 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 BTF3P20290 206 aaKnown RBP12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 CDC34P49427 236 aaPredicted RBP12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 SERF2P84101 59 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 MUC21Q5SSG8 566 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 FAM159AQ6UWV7 190 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 HSD17B11Q8NBQ5 300 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 SUN5Q8TC36 379 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 MDFICQ9P1T7 246 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 PRO0255Q9UI72 69 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 PKHD1P08F94 4074 aa12.38□□□□□ -0.43
CHMP2A-203ENST00000597209 MUC4Q99102 2169 aa12.37□□□□□ -0.43
CHMP2A-203ENST00000597209 SERTM2A0A1B0GWG4 89 aa12.37□□□□□ -0.43
CHMP2A-203ENST00000597209 PAX4O43316 350 aa12.37□□□□□ -0.43
CHMP2A-203ENST00000597209 ATP6V0CP27449 155 aa12.37□□□□□ -0.43
CHMP2A-203ENST00000597209 TNP2Q05952 138 aa12.37□□□□□ -0.43
CHMP2A-203ENST00000597209 GOLT1AQ6ZVE7 132 aa12.37□□□□□ -0.43
CHMP2A-203ENST00000597209 IQCF2Q8IXL9 164 aa12.37□□□□□ -0.43
CHMP2A-203ENST00000597209 DYNC1H1Q14204 4646 aaKnown RBP12.36□□□□□ -0.43
CHMP2A-203ENST00000597209 HMGB3O15347 200 aaKnown RBP12.36□□□□□ -0.43
CHMP2A-203ENST00000597209 ARL14EPLP0DKL9 152 aa12.36□□□□□ -0.43
CHMP2A-203ENST00000597209 CRYBA4P53673 196 aa12.36□□□□□ -0.43
CHMP2A-203ENST00000597209 FHL2Q14192 279 aa12.36□□□□□ -0.43
CHMP2A-203ENST00000597209 RASL10AQ92737 203 aa12.36□□□□□ -0.43
CHMP2A-203ENST00000597209 RPH3ALQ9UNE2 315 aa12.36□□□□□ -0.43
CHMP2A-203ENST00000597209 ICOSQ9Y6W8 199 aa12.36□□□□□ -0.43
CHMP2A-203ENST00000597209 TRAV21A0A0B4J279 112 aa12.35□□□□□ -0.43
CHMP2A-203ENST00000597209 TMEM183BQ1AE95 376 aa12.35□□□□□ -0.43
CHMP2A-203ENST00000597209 Q5BKY6 102 aa12.35□□□□□ -0.43
CHMP2A-203ENST00000597209 TMEM183AQ8IXX5 376 aa12.35□□□□□ -0.43
CHMP2A-203ENST00000597209 RAB24Q969Q5 203 aa12.35□□□□□ -0.43
CHMP2A-203ENST00000597209 TVP23CQ96ET8 276 aa12.35□□□□□ -0.43
CHMP2A-203ENST00000597209 KRTAP1-5Q9BYS1 174 aa12.35□□□□□ -0.43
CHMP2A-203ENST00000597209 TNFSF18Q9UNG2 199 aa12.35□□□□□ -0.43
CHMP2A-203ENST00000597209 HHLA3Q9XRX5 114 aa12.35□□□□□ -0.43
CHMP2A-203ENST00000597209 IGHV3-53P01767 116 aa12.34□□□□□ -0.43
CHMP2A-203ENST00000597209 C5orf17Q8NAS9 161 aa12.34□□□□□ -0.43
CHMP2A-203ENST00000597209 INO80EQ8NBZ0 244 aaPredicted RBP12.34□□□□□ -0.43
CHMP2A-203ENST00000597209 TREM1Q9NP99 234 aa12.34□□□□□ -0.43
CHMP2A-203ENST00000597209 TRAV8-1A0A0A6YYK1 113 aa12.33□□□□□ -0.44
CHMP2A-203ENST00000597209 GCHFRP30047 84 aa12.33□□□□□ -0.44
CHMP2A-203ENST00000597209 GNG5P63218 68 aa12.33□□□□□ -0.44
CHMP2A-203ENST00000597209 MRPL23Q16540 153 aaKnown RBP12.33□□□□□ -0.44
CHMP2A-203ENST00000597209 KCNS1Q96KK3 526 aa12.33□□□□□ -0.44
CHMP2A-203ENST00000597209 IGHV3-16A0A0C4DH30 117 aa12.32□□□□□ -0.44
CHMP2A-203ENST00000597209 RNF222A6NCQ9 220 aa12.32□□□□□ -0.44
CHMP2A-203ENST00000597209 CXorf1O96002 111 aa12.32□□□□□ -0.44
CHMP2A-203ENST00000597209 TCRAP04437 139 aa12.32□□□□□ -0.44
CHMP2A-203ENST00000597209 C8orf49Q96NF6 230 aa12.32□□□□□ -0.44
CHMP2A-203ENST00000597209 NDFIP1Q9BT67 221 aa12.32□□□□□ -0.44
CHMP2A-203ENST00000597209 ACTR3CQ9C0K3 210 aaPredicted RBP12.32□□□□□ -0.44
CHMP2A-203ENST00000597209 SH3BGRL3Q9H299 93 aa12.32□□□□□ -0.44
CHMP2A-203ENST00000597209 TMEM167BQ9NRX6 74 aa12.32□□□□□ -0.44
CHMP2A-203ENST00000597209 TRGV4A0A0C4DH28 118 aa12.31□□□□□ -0.44
CHMP2A-203ENST00000597209 F6UZH7 168 aa12.31□□□□□ -0.44
CHMP2A-203ENST00000597209 K7EQM0 130 aa12.31□□□□□ -0.44
CHMP2A-203ENST00000597209 M0R2P5 195 aa12.31□□□□□ -0.44
CHMP2A-203ENST00000597209 GNRH2O43555 120 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms