RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 GNG13Q9P2W3 67 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 C11orf21Q9P2W6 132 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 TRAV12-3A0A0B4J271 114 aa7.58□□□□□ -1.2
LIG1-210ENST00000596332 A0A0J9YWU9 116 aa7.58□□□□□ -1.2
LIG1-210ENST00000596332 TRBV6-1A0A0K0K1D8 114 aa7.58□□□□□ -1.2
LIG1-210ENST00000596332 LOC102723971A0A1B0GUV8 181 aa7.58□□□□□ -1.2
LIG1-210ENST00000596332 SERTM2A0A1B0GWG4 89 aa7.58□□□□□ -1.2
LIG1-210ENST00000596332 SCO2A0A1W2PP80 73 aa7.58□□□□□ -1.2
LIG1-210ENST00000596332 C7orf71A4D174 169 aa7.58□□□□□ -1.2
LIG1-210ENST00000596332 ZNF705GA8MUZ8 300 aaPredicted RBP7.58□□□□□ -1.2
LIG1-210ENST00000596332 C11orf94C9JXX5 98 aa7.58□□□□□ -1.2
LIG1-210ENST00000596332 J3KRW8 73 aa7.58□□□□□ -1.2
LIG1-210ENST00000596332 HBE1P02100 147 aa7.58□□□□□ -1.2
LIG1-210ENST00000596332 RNASE4P34096 147 aaKnown RBP7.58□□□□□ -1.2
LIG1-210ENST00000596332 LEPP41159 167 aa7.58□□□□□ -1.2
LIG1-210ENST00000596332 FLI1Q01543 452 aaPredicted RBP7.58□□□□□ -1.2
LIG1-210ENST00000596332 Q6AWC8 147 aa7.58□□□□□ -1.2
LIG1-210ENST00000596332 INSP01308 110 aa7.57□□□□□ -1.2
LIG1-210ENST00000596332 BCL2P10415 239 aa7.57□□□□□ -1.2
LIG1-210ENST00000596332 TSPOP30536 169 aa7.57□□□□□ -1.2
LIG1-210ENST00000596332 PPT1P50897 306 aa7.57□□□□□ -1.2
LIG1-210ENST00000596332 TMEM183BQ1AE95 376 aa7.57□□□□□ -1.2
LIG1-210ENST00000596332 C4orf48Q5BLP8 95 aa7.57□□□□□ -1.2
LIG1-210ENST00000596332 C20orf144Q9BQM9 153 aa7.57□□□□□ -1.2
LIG1-210ENST00000596332 LINC00467Q9BRT7 94 aa7.57□□□□□ -1.2
LIG1-210ENST00000596332 DERL1Q9BUN8 251 aa7.57□□□□□ -1.2
LIG1-210ENST00000596332 MLST8Q9BVC4 326 aa7.57□□□□□ -1.2
LIG1-210ENST00000596332 C11orf68Q9H3H3 251 aaKnown RBP7.57□□□□□ -1.2
LIG1-210ENST00000596332 MANBALQ9NQG1 85 aa7.57□□□□□ -1.2
LIG1-210ENST00000596332 TP53TG3Q9ULZ0 132 aa7.57□□□□□ -1.2
LIG1-210ENST00000596332 TMA7Q9Y2S6 64 aaKnown RBP7.57□□□□□ -1.2
LIG1-210ENST00000596332 TRBV20OR9-2A0A075B6H5 130 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 IGHV3OR16-12A0A075B7B8 117 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 SMIM9A6NGZ8 99 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 C9JQL5 133 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 F6UZH7 168 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 LTAP01374 205 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 IGLV2-8P01709 118 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 GPX1P07203 203 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 MIFP14174 115 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 SRSF3P84103 164 aaKnown RBP7.56□□□□□ -1.2
LIG1-210ENST00000596332 MEF2BQ02080 365 aaPredicted RBP7.56□□□□□ -1.2
LIG1-210ENST00000596332 ZNF506Q5JVG8 444 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 PRNTQ86SH4 94 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 Q86TA4 180 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 EIF4E3Q8N5X7 224 aaKnown RBP7.56□□□□□ -1.2
LIG1-210ENST00000596332 C11orf72Q8NBR9 251 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 RNASE8Q8TDE3 154 aaKnown RBP7.56□□□□□ -1.2
LIG1-210ENST00000596332 TCEAL7Q9BRU2 100 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 CELA1Q9UNI1 258 aa7.56□□□□□ -1.2
LIG1-210ENST00000596332 RBFOX3A6NFN3 312 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 TEX46H3BTG2 121 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 H7BYZ3 331 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 TAS2R60P59551 318 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 TMEM256Q8N2U0 113 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 IL17DQ8TAD2 202 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 ZC2HC1AQ96GY0 325 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 LINC01587Q99440 93 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 TXNDC17Q9BRA2 123 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 TREM1Q9NP99 234 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 VAX2Q9UIW0 290 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 GOLT1BQ9Y3E0 138 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 STARD9Q9P2P6 4700 aa7.55□□□□□ -1.2
LIG1-210ENST00000596332 DYNC2H1Q8NCM8 4307 aaKnown RBP7.55□□□□□ -1.2
LIG1-210ENST00000596332 RAB19A4D1S5 217 aa7.54□□□□□ -1.2
LIG1-210ENST00000596332 FBLL1A6NHQ2 334 aaKnown RBP7.54□□□□□ -1.2
LIG1-210ENST00000596332 TDRG1Q3Y452 100 aa7.54□□□□□ -1.2
LIG1-210ENST00000596332 FMC1Q96HJ9 113 aa7.54□□□□□ -1.2
LIG1-210ENST00000596332 WWC2-AS2Q96NR7 200 aa7.54□□□□□ -1.2
LIG1-210ENST00000596332 PYGO2Q9BRQ0 406 aa7.54□□□□□ -1.2
LIG1-210ENST00000596332 GNRH2O43555 120 aa7.53□□□□□ -1.2
LIG1-210ENST00000596332 GCGP01275 180 aa7.53□□□□□ -1.2
LIG1-210ENST00000596332 SRP19P09132 144 aaKnown RBP7.53□□□□□ -1.2
LIG1-210ENST00000596332 RPL35P42766 123 aaKnown RBP7.53□□□□□ -1.2
LIG1-210ENST00000596332 RRN3P1Q2M238 152 aa7.53□□□□□ -1.2
LIG1-210ENST00000596332 ZNF674Q2M3X9 581 aa7.53□□□□□ -1.2
LIG1-210ENST00000596332 C12orf74Q32Q52 190 aa7.53□□□□□ -1.2
LIG1-210ENST00000596332 ANXA2RQ3ZCQ2 193 aa7.53□□□□□ -1.2
LIG1-210ENST00000596332 SAPCD1Q5SSQ6 148 aa7.53□□□□□ -1.2
LIG1-210ENST00000596332 DKK2Q9UBU2 259 aa7.53□□□□□ -1.2
LIG1-210ENST00000596332 ZFP30Q9Y2G7 519 aa7.53□□□□□ -1.2
LIG1-210ENST00000596332 IGHV1OR15-1A0A075B7D0 117 aa7.52□□□□□ -1.21
LIG1-210ENST00000596332 IGKV3D-20A0A0C4DH25 116 aa7.52□□□□□ -1.21
LIG1-210ENST00000596332 K7EQM0 130 aa7.52□□□□□ -1.21
LIG1-210ENST00000596332 PDE6DO43924 150 aa7.52□□□□□ -1.21
LIG1-210ENST00000596332 NDUFS6O75380 124 aaKnown RBP7.52□□□□□ -1.21
LIG1-210ENST00000596332 AKR1C3P42330 323 aa7.52□□□□□ -1.21
LIG1-210ENST00000596332 NANOS2P60321 138 aaKnown RBP7.52□□□□□ -1.21
LIG1-210ENST00000596332 MUC21Q5SSG8 566 aa7.52□□□□□ -1.21
LIG1-210ENST00000596332 TMEM183AQ8IXX5 376 aa7.52□□□□□ -1.21
LIG1-210ENST00000596332 LINC00612Q8N6U2 182 aa7.52□□□□□ -1.21
LIG1-210ENST00000596332 NHLRC2Q8NBF2 726 aa7.52□□□□□ -1.21
LIG1-210ENST00000596332 NIPSNAP3BQ9BS92 247 aa7.52□□□□□ -1.21
LIG1-210ENST00000596332 MDFICQ9P1T7 246 aa7.52□□□□□ -1.21
LIG1-210ENST00000596332 LOC105371267A0A1B0GV96 52 aa7.51□□□□□ -1.21
LIG1-210ENST00000596332 PGPEP1LA6NFU8 196 aa7.51□□□□□ -1.21
LIG1-210ENST00000596332 TMEM250H0YL14 139 aa7.51□□□□□ -1.21
LIG1-210ENST00000596332 IFNA1P01562 189 aa7.51□□□□□ -1.21
LIG1-210ENST00000596332 S100A9P06702 114 aaKnown RBP7.51□□□□□ -1.21
LIG1-210ENST00000596332 PFN1P07737 140 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms