RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 SPINK13Q1W4C9 94 aa14.05□□□□□ -0.16
PNKP-207ENST00000596014 OR11H2Q8NH07 326 aa14.05□□□□□ -0.16
PNKP-207ENST00000596014 IGKV2-40A0A087WW87 121 aaPredicted RBP14.04□□□□□ -0.16
PNKP-207ENST00000596014 C1orf196B1AJZ1 125 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 IGKV2D-40P01614 121 aaPredicted RBP14.04□□□□□ -0.16
PNKP-207ENST00000596014 CT45A10P0DMU9 189 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 RAB5BP61020 215 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 ERCC8Q13216 396 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 CMTM2Q8TAZ6 248 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 AGPAT4-IT1Q9H0P7 198 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 GGTLC3B5MD39 225 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 DIRC3C9JPN6 131 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 CXCL1P09341 107 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 C9orf47Q6ZRZ4 202 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 LINC01551Q86U37 167 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 LINC00477Q96M19 166 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 VGLL1Q99990 258 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 URGCP-MRPS24S4R325 110 aa14.04□□□□□ -0.16
PNKP-207ENST00000596014 A0A1W2PRE2 83 aa14.03□□□□□ -0.16
PNKP-207ENST00000596014 CRXO43186 299 aaPredicted RBP14.03□□□□□ -0.16
PNKP-207ENST00000596014 AMBPP02760 352 aa14.03□□□□□ -0.16
PNKP-207ENST00000596014 ZFP82Q8N141 532 aa14.03□□□□□ -0.16
PNKP-207ENST00000596014 TRBV20OR9-2A0A075B6H5 130 aa14.02□□□□□ -0.16
PNKP-207ENST00000596014 TGIF2-C20orf24A0A0A6YYL0 155 aa14.02□□□□□ -0.16
PNKP-207ENST00000596014 H7BYZ3 331 aa14.02□□□□□ -0.16
PNKP-207ENST00000596014 SUMO1P63165 101 aaKnown RBP14.02□□□□□ -0.16
PNKP-207ENST00000596014 ARL6IP6Q8N6S5 226 aa14.02□□□□□ -0.16
PNKP-207ENST00000596014 ANAPC16Q96DE5 110 aa14.02□□□□□ -0.16
PNKP-207ENST00000596014 IGF2BP2-AS1Q96M15 143 aa14.02□□□□□ -0.16
PNKP-207ENST00000596014 TRAV12-2A0A075B6T6 113 aa14.01□□□□□ -0.17
PNKP-207ENST00000596014 RBAKDNA6NC62 111 aa14.01□□□□□ -0.17
PNKP-207ENST00000596014 C9JCJ5 164 aa14.01□□□□□ -0.17
PNKP-207ENST00000596014 SLC25A5P05141 298 aaKnown RBP14.01□□□□□ -0.17
PNKP-207ENST00000596014 CDKN1BP46527 198 aa14.01□□□□□ -0.17
PNKP-207ENST00000596014 ODF3Q96PU9 254 aa14.01□□□□□ -0.17
PNKP-207ENST00000596014 TSPOP30536 169 aa14.01□□□□□ -0.17
PNKP-207ENST00000596014 TMEM78Q5T7P6 136 aa14.01□□□□□ -0.17
PNKP-207ENST00000596014 ZNF705AQ6ZN79 300 aaPredicted RBP14.01□□□□□ -0.17
PNKP-207ENST00000596014 C5orf17Q8NAS9 161 aa14.01□□□□□ -0.17
PNKP-207ENST00000596014 C2CD4CQ8TF44 421 aa14.01□□□□□ -0.17
PNKP-207ENST00000596014 EDA2RQ9HAV5 297 aa14.01□□□□□ -0.17
PNKP-207ENST00000596014 RPH3ALQ9UNE2 315 aa14.01□□□□□ -0.17
PNKP-207ENST00000596014 PGPEP1LA6NFU8 196 aa14□□□□□ -0.17
PNKP-207ENST00000596014 GNG5P63218 68 aa14□□□□□ -0.17
PNKP-207ENST00000596014 C1orf158Q8N1D5 194 aa14□□□□□ -0.17
PNKP-207ENST00000596014 X6R8D5 127 aa14□□□□□ -0.17
PNKP-207ENST00000596014 INSP01308 110 aa13.99□□□□□ -0.17
PNKP-207ENST00000596014 RPL35P42766 123 aaKnown RBP13.99□□□□□ -0.17
PNKP-207ENST00000596014 KIR3DS1Q14943 382 aa13.99□□□□□ -0.17
PNKP-207ENST00000596014 GOLT1AQ6ZVE7 132 aa13.99□□□□□ -0.17
PNKP-207ENST00000596014 FAM19A4Q96LR4 140 aa13.99□□□□□ -0.17
PNKP-207ENST00000596014 ZNF492Q9P255 531 aa13.99□□□□□ -0.17
PNKP-207ENST00000596014 GOLT1BQ9Y3E0 138 aa13.99□□□□□ -0.17
PNKP-207ENST00000596014 DNAH7Q8WXX0 4024 aa13.99□□□□□ -0.17
PNKP-207ENST00000596014 IGHV3OR16-12A0A075B7B8 117 aa13.98□□□□□ -0.17
PNKP-207ENST00000596014 LEPP41159 167 aa13.98□□□□□ -0.17
PNKP-207ENST00000596014 RPS10P46783 165 aaKnown RBP13.98□□□□□ -0.17
PNKP-207ENST00000596014 ZNF138P52744 262 aa13.98□□□□□ -0.17
PNKP-207ENST00000596014 EPDR1Q9UM22 224 aa13.98□□□□□ -0.17
PNKP-207ENST00000596014 LY96Q9Y6Y9 160 aa13.98□□□□□ -0.17
PNKP-207ENST00000596014 PPP1R2P9O14990 202 aa13.98□□□□□ -0.17
PNKP-207ENST00000596014 TCRAP04437 139 aa13.98□□□□□ -0.17
PNKP-207ENST00000596014 WWC2-AS2Q96NR7 200 aa13.98□□□□□ -0.17
PNKP-207ENST00000596014 BIN3Q9NQY0 253 aa13.98□□□□□ -0.17
PNKP-207ENST00000596014 TRBV24-1A0A075B6N3 115 aa13.97□□□□□ -0.17
PNKP-207ENST00000596014 A0A0J9YWU9 116 aa13.97□□□□□ -0.17
PNKP-207ENST00000596014 J3KRW8 73 aa13.97□□□□□ -0.17
PNKP-207ENST00000596014 MIFP14174 115 aa13.97□□□□□ -0.17
PNKP-207ENST00000596014 S100PP25815 95 aa13.97□□□□□ -0.17
PNKP-207ENST00000596014 CENPWQ5EE01 88 aa13.97□□□□□ -0.17
PNKP-207ENST00000596014 GFI1BQ5VTD9 330 aa13.97□□□□□ -0.17
PNKP-207ENST00000596014 Q8TAT8 98 aa13.97□□□□□ -0.17
PNKP-207ENST00000596014 FAM210BQ96KR6 192 aa13.97□□□□□ -0.17
PNKP-207ENST00000596014 TMEM208Q9BTX3 173 aa13.97□□□□□ -0.17
PNKP-207ENST00000596014 SERTM2A0A1B0GWG4 89 aa13.96□□□□□ -0.17
PNKP-207ENST00000596014 PFN1P07737 140 aaKnown RBP13.96□□□□□ -0.17
PNKP-207ENST00000596014 RBMY1A1P0DJD3 496 aaKnown RBP13.96□□□□□ -0.17
PNKP-207ENST00000596014 RBMY1CP0DJD4 496 aa13.96□□□□□ -0.17
PNKP-207ENST00000596014 CRISP2P16562 243 aa13.96□□□□□ -0.17
PNKP-207ENST00000596014 RBMY1FQ15415 496 aaKnown RBP13.96□□□□□ -0.17
PNKP-207ENST00000596014 Q8NAQ8 132 aa13.96□□□□□ -0.17
PNKP-207ENST00000596014 NEU1Q99519 415 aa13.96□□□□□ -0.17
PNKP-207ENST00000596014 TCEAL7Q9BRU2 100 aa13.96□□□□□ -0.17
PNKP-207ENST00000596014 TRAV8-1A0A0A6YYK1 113 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 OCC1Q8TAD7 63 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 SFRP2Q96HF1 295 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 IGHV4-28A0A0C4DH34 117 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 TRBV7-9A0A0J9YWB2 115 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 SMIM9A6NGZ8 99 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 KLLNB2CW77 178 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 K7EN84 100 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 K7EQM0 130 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 DEFB4AO15263 64 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 GNG4P50150 75 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 ZFAND2AQ8N6M9 145 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 PYGO2Q9BRQ0 406 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 ATG101Q9BSB4 218 aa13.95□□□□□ -0.18
PNKP-207ENST00000596014 PEX7O00628 323 aa13.94□□□□□ -0.18
PNKP-207ENST00000596014 GPX1P07203 203 aa13.94□□□□□ -0.18
PNKP-207ENST00000596014 SGK494Q96LW2 274 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms