RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 ANKHD1Q8IWZ3 2542 aaKnown RBP12.7□□□□□ -0.38
SIN3B-206ENST00000595541 IGHV3OR16-13A0A075B7E8 117 aa12.7□□□□□ -0.38
SIN3B-206ENST00000595541 IGHV3-74A0A0B4J1X5 117 aa12.7□□□□□ -0.38
SIN3B-206ENST00000595541 NCBP2LA6PVI3 153 aaKnown RBP12.7□□□□□ -0.38
SIN3B-206ENST00000595541 B9A039 149 aa12.7□□□□□ -0.38
SIN3B-206ENST00000595541 CEACAM3P40198 252 aa12.7□□□□□ -0.38
SIN3B-206ENST00000595541 LY6G5BQ8NDX9 201 aa12.7□□□□□ -0.38
SIN3B-206ENST00000595541 ZNF48Q96MX3 618 aaPredicted RBP12.7□□□□□ -0.38
SIN3B-206ENST00000595541 TM2D2Q9BX73 214 aa12.7□□□□□ -0.38
SIN3B-206ENST00000595541 NXT2Q9NPJ8 142 aaKnown RBP12.7□□□□□ -0.38
SIN3B-206ENST00000595541 IGF2-ASQ6U949 168 aa12.69□□□□□ -0.38
SIN3B-206ENST00000595541 LINC01560Q8TB33 94 aa12.69□□□□□ -0.38
SIN3B-206ENST00000595541 ZFHX2Q9C0A1 2572 aaPredicted RBP12.69□□□□□ -0.38
SIN3B-206ENST00000595541 DPM2O94777 84 aa12.69□□□□□ -0.38
SIN3B-206ENST00000595541 ZNF672Q499Z4 452 aaPredicted RBP12.69□□□□□ -0.38
SIN3B-206ENST00000595541 TTC9CQ8N5M4 171 aa12.69□□□□□ -0.38
SIN3B-206ENST00000595541 OR11H6Q8NGC7 330 aa12.69□□□□□ -0.38
SIN3B-206ENST00000595541 EFNA4P52798 201 aa12.69□□□□□ -0.38
SIN3B-206ENST00000595541 MTURNQ8N3F0 131 aa12.69□□□□□ -0.38
SIN3B-206ENST00000595541 LINC01559Q495D7 138 aa12.68□□□□□ -0.38
SIN3B-206ENST00000595541 Q8N8P6 123 aa12.68□□□□□ -0.38
SIN3B-206ENST00000595541 GTSF1LQ9H1H1 148 aa12.68□□□□□ -0.38
SIN3B-206ENST00000595541 IGLL5B9A064 214 aa12.68□□□□□ -0.38
SIN3B-206ENST00000595541 E9PLD3 99 aa12.68□□□□□ -0.38
SIN3B-206ENST00000595541 AMTNQ6UX39 209 aa12.68□□□□□ -0.38
SIN3B-206ENST00000595541 GRNP28799 593 aaKnown RBP12.67□□□□□ -0.38
SIN3B-206ENST00000595541 NRACQ8N912 160 aa12.67□□□□□ -0.38
SIN3B-206ENST00000595541 SRSF2Q01130 221 aaKnown RBP12.67□□□□□ -0.38
SIN3B-206ENST00000595541 SH2D6Q7Z4S9 175 aa12.67□□□□□ -0.38
SIN3B-206ENST00000595541 AGPAT4-IT1Q9H0P7 198 aa12.67□□□□□ -0.38
SIN3B-206ENST00000595541 NBASA2RRP1 2371 aa12.66□□□□□ -0.38
SIN3B-206ENST00000595541 H3BMG7 143 aa12.66□□□□□ -0.38
SIN3B-206ENST00000595541 CD3EP07766 207 aa12.66□□□□□ -0.38
SIN3B-206ENST00000595541 CFAP161Q6P656 301 aa12.66□□□□□ -0.38
SIN3B-206ENST00000595541 IGHV3-49A0A0A0MS15 119 aa12.66□□□□□ -0.38
SIN3B-206ENST00000595541 SPRY2O43597 315 aa12.66□□□□□ -0.38
SIN3B-206ENST00000595541 AZU1P20160 251 aa12.66□□□□□ -0.38
SIN3B-206ENST00000595541 IGHV7-4-1A0A0J9YVY3 117 aa12.65□□□□□ -0.38
SIN3B-206ENST00000595541 ODF3BA8MYP8 253 aa12.65□□□□□ -0.38
SIN3B-206ENST00000595541 SPANXB1Q9NS25 103 aaPredicted RBP12.65□□□□□ -0.38
SIN3B-206ENST00000595541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.65□□□□□ -0.38
SIN3B-206ENST00000595541 FOXI2Q6ZQN5 318 aa12.65□□□□□ -0.38
SIN3B-206ENST00000595541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.64□□□□□ -0.39
SIN3B-206ENST00000595541 BUB3O43684 328 aa12.64□□□□□ -0.39
SIN3B-206ENST00000595541 ATP5LO75964 103 aa12.64□□□□□ -0.39
SIN3B-206ENST00000595541 C12orf74Q32Q52 190 aa12.64□□□□□ -0.39
SIN3B-206ENST00000595541 TSSC4Q9Y5U2 329 aaPredicted RBP12.64□□□□□ -0.39
SIN3B-206ENST00000595541 CELSR1Q9NYQ6 3014 aa12.64□□□□□ -0.39
SIN3B-206ENST00000595541 IGHV7-81A0A0B4J1V7 117 aa12.64□□□□□ -0.39
SIN3B-206ENST00000595541 SMAGPQ0VAQ4 97 aa12.64□□□□□ -0.39
SIN3B-206ENST00000595541 LCNL1Q6ZST4 164 aa12.64□□□□□ -0.39
SIN3B-206ENST00000595541 ZFAND3Q9H8U3 227 aa12.64□□□□□ -0.39
SIN3B-206ENST00000595541 SCGB2A2Q13296 93 aa12.64□□□□□ -0.39
SIN3B-206ENST00000595541 ETDBQ3ZM63 59 aa12.64□□□□□ -0.39
SIN3B-206ENST00000595541 UFC1Q9Y3C8 167 aa12.64□□□□□ -0.39
SIN3B-206ENST00000595541 CLPSL1A2RUU4 121 aa12.63□□□□□ -0.39
SIN3B-206ENST00000595541 INSL3P51460 131 aa12.63□□□□□ -0.39
SIN3B-206ENST00000595541 Q8N6K4 173 aa12.63□□□□□ -0.39
SIN3B-206ENST00000595541 ZNF479Q96JC4 524 aa12.63□□□□□ -0.39
SIN3B-206ENST00000595541 TRAV8-2A0A0B4J237 113 aa12.63□□□□□ -0.39
SIN3B-206ENST00000595541 A0A1B0GV72 72 aa12.63□□□□□ -0.39
SIN3B-206ENST00000595541 CLEC3BP05452 202 aa12.63□□□□□ -0.39
SIN3B-206ENST00000595541 LAGE3Q14657 143 aa12.63□□□□□ -0.39
SIN3B-206ENST00000595541 SMPXQ9UHP9 88 aa12.63□□□□□ -0.39
SIN3B-206ENST00000595541 CEP295Q9C0D2 2601 aa12.62□□□□□ -0.39
SIN3B-206ENST00000595541 A0A087WX48 190 aa12.62□□□□□ -0.39
SIN3B-206ENST00000595541 C15orf32Q32M92 178 aa12.62□□□□□ -0.39
SIN3B-206ENST00000595541 SPAG8Q99932 426 aaPredicted RBP12.62□□□□□ -0.39
SIN3B-206ENST00000595541 MSRB2Q9Y3D2 182 aa12.62□□□□□ -0.39
SIN3B-206ENST00000595541 SRSF1Q07955 248 aaKnown RBP eCLIP12.61□□□□□ -0.39
SIN3B-206ENST00000595541 MYOZ3Q8TDC0 251 aa12.61□□□□□ -0.39
SIN3B-206ENST00000595541 KLK15Q9H2R5 256 aa12.61□□□□□ -0.39
SIN3B-206ENST00000595541 IGF1P05019 195 aa12.61□□□□□ -0.39
SIN3B-206ENST00000595541 PRTN3P24158 256 aa12.61□□□□□ -0.39
SIN3B-206ENST00000595541 GAGE12HA6NDE8 117 aa12.6□□□□□ -0.39
SIN3B-206ENST00000595541 PRR9Q5T870 116 aa12.6□□□□□ -0.39
SIN3B-206ENST00000595541 VMO1Q7Z5L0 202 aa12.6□□□□□ -0.39
SIN3B-206ENST00000595541 TRBV7-3A0A075B6L6 115 aa12.6□□□□□ -0.39
SIN3B-206ENST00000595541 LINC01548A6NM66 108 aa12.6□□□□□ -0.39
SIN3B-206ENST00000595541 PSMG4Q5JS54 123 aa12.6□□□□□ -0.39
SIN3B-206ENST00000595541 ZNF502Q8TBZ5 544 aa12.6□□□□□ -0.39
SIN3B-206ENST00000595541 HIST1H4GQ99525 98 aa12.6□□□□□ -0.39
SIN3B-206ENST00000595541 PRO0461Q9UI25 63 aa12.59□□□□□ -0.39
SIN3B-206ENST00000595541 SPTA1P02549 2419 aa12.59□□□□□ -0.39
SIN3B-206ENST00000595541 F8W1H4 67 aa12.59□□□□□ -0.39
SIN3B-206ENST00000595541 HLA-DRB4P13762 266 aa12.59□□□□□ -0.39
SIN3B-206ENST00000595541 CD300EQ496F6 205 aaPredicted RBP12.59□□□□□ -0.39
SIN3B-206ENST00000595541 Q8N9W7 124 aa12.59□□□□□ -0.39
SIN3B-206ENST00000595541 SIGMAR1Q99720 223 aa12.59□□□□□ -0.39
SIN3B-206ENST00000595541 HLA-DRB4X5D2U9 266 aa12.59□□□□□ -0.39
SIN3B-206ENST00000595541 ECSCRQ19T08 205 aa12.58□□□□□ -0.39
SIN3B-206ENST00000595541 CCDC140Q96MF4 163 aa12.58□□□□□ -0.4
SIN3B-206ENST00000595541 ATP6V0BQ99437 205 aa12.58□□□□□ -0.4
SIN3B-206ENST00000595541 SPTBN1Q01082 2364 aaKnown RBP12.58□□□□□ -0.4
SIN3B-206ENST00000595541 RBAKDNA6NC62 111 aa12.58□□□□□ -0.4
SIN3B-206ENST00000595541 H3BVH4 76 aa12.58□□□□□ -0.4
SIN3B-206ENST00000595541 CLEC19AQ6UXS0 136 aa12.58□□□□□ -0.4
SIN3B-206ENST00000595541 G3V318 75 aa12.57□□□□□ -0.4
SIN3B-206ENST00000595541 J3KRW8 73 aa12.57□□□□□ -0.4
SIN3B-206ENST00000595541 RAB9AP51151 201 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms