RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 A0A1W2PPV4 95 aa16.28■□□□□ 0.2
LSM4-204ENST00000594828 HYLS1Q96M11 299 aa16.28■□□□□ 0.2
LSM4-204ENST00000594828 MED14OSP0DP75 135 aa16.27■□□□□ 0.2
LSM4-204ENST00000594828 ZNF266Q14584 549 aa16.27■□□□□ 0.2
LSM4-204ENST00000594828 VSIG2Q96IQ7 327 aa16.27■□□□□ 0.2
LSM4-204ENST00000594828 OTORQ9NRC9 128 aa16.27■□□□□ 0.2
LSM4-204ENST00000594828 PGPA6NDG6 321 aa16.26■□□□□ 0.19
LSM4-204ENST00000594828 FAM74A1Q5RGS3 127 aa16.26■□□□□ 0.19
LSM4-204ENST00000594828 PQLC2Q6ZP29 291 aa16.26■□□□□ 0.19
LSM4-204ENST00000594828 CMTM2Q8TAZ6 248 aa16.26■□□□□ 0.19
LSM4-204ENST00000594828 LENEPQ9Y5L5 61 aa16.26■□□□□ 0.19
LSM4-204ENST00000594828 PKD1P98161 4303 aa16.25■□□□□ 0.19
LSM4-204ENST00000594828 RAB2AP61019 212 aa16.25■□□□□ 0.19
LSM4-204ENST00000594828 MUC21Q5SSG8 566 aa16.25■□□□□ 0.19
LSM4-204ENST00000594828 OR10G4Q8NGN3 311 aa16.25■□□□□ 0.19
LSM4-204ENST00000594828 OR10G9Q8NGN4 311 aa16.25■□□□□ 0.19
LSM4-204ENST00000594828 OR10G7Q8NGN6 311 aa16.25■□□□□ 0.19
LSM4-204ENST00000594828 ST6GAL2Q96JF0 529 aa16.25■□□□□ 0.19
LSM4-204ENST00000594828 UPK3BQ9BT76 320 aa16.25■□□□□ 0.19
LSM4-204ENST00000594828 MRPL16Q9NX20 251 aaKnown RBP16.25■□□□□ 0.19
LSM4-204ENST00000594828 KIAA1109Q2LD37 5005 aa16.24■□□□□ 0.19
LSM4-204ENST00000594828 A0A096LPF7 62 aa16.24■□□□□ 0.19
LSM4-204ENST00000594828 PTTG1O95997 202 aa16.24■□□□□ 0.19
LSM4-204ENST00000594828 TNP2Q05952 138 aa16.24■□□□□ 0.19
LSM4-204ENST00000594828 ZNF415Q09FC8 603 aa16.24■□□□□ 0.19
LSM4-204ENST00000594828 TMED6Q8WW62 240 aa16.24■□□□□ 0.19
LSM4-204ENST00000594828 MED28Q9H204 178 aa16.24■□□□□ 0.19
LSM4-204ENST00000594828 MRPS16Q9Y3D3 137 aaKnown RBP16.24■□□□□ 0.19
LSM4-204ENST00000594828 IGHV3-53P01767 116 aa16.23■□□□□ 0.19
LSM4-204ENST00000594828 Q6AWC8 147 aa16.23■□□□□ 0.19
LSM4-204ENST00000594828 RPH3ALQ9UNE2 315 aa16.23■□□□□ 0.19
LSM4-204ENST00000594828 PKHD1P08F94 4074 aa16.23■□□□□ 0.19
LSM4-204ENST00000594828 HMGB3O15347 200 aaKnown RBP16.22■□□□□ 0.19
LSM4-204ENST00000594828 TTC32Q5I0X7 151 aa16.22■□□□□ 0.19
LSM4-204ENST00000594828 FAM159AQ6UWV7 190 aa16.22■□□□□ 0.19
LSM4-204ENST00000594828 MDFICQ9P1T7 246 aa16.22■□□□□ 0.19
LSM4-204ENST00000594828 PAX4O43316 350 aa16.21■□□□□ 0.19
LSM4-204ENST00000594828 ARL6IP6Q8N6S5 226 aa16.21■□□□□ 0.19
LSM4-204ENST00000594828 HSD17B11Q8NBQ5 300 aa16.21■□□□□ 0.19
LSM4-204ENST00000594828 SLAQ13239 276 aa16.2■□□□□ 0.18
LSM4-204ENST00000594828 GOLT1AQ6ZVE7 132 aa16.2■□□□□ 0.18
LSM4-204ENST00000594828 AQP10Q96PS8 301 aa16.2■□□□□ 0.18
LSM4-204ENST00000594828 KRTAP17-1Q9BYP8 105 aa16.2■□□□□ 0.18
LSM4-204ENST00000594828 PRO0255Q9UI72 69 aa16.2■□□□□ 0.18
LSM4-204ENST00000594828 CDC34P49427 236 aaPredicted RBP16.19■□□□□ 0.18
LSM4-204ENST00000594828 TMEM183BQ1AE95 376 aa16.19■□□□□ 0.18
LSM4-204ENST00000594828 ZNF575Q86XF7 245 aa16.19■□□□□ 0.18
LSM4-204ENST00000594828 TMEM183AQ8IXX5 376 aa16.19■□□□□ 0.18
LSM4-204ENST00000594828 OR2G3Q8NGZ4 309 aa16.19■□□□□ 0.18
LSM4-204ENST00000594828 KRTAP1-5Q9BYS1 174 aa16.19■□□□□ 0.18
LSM4-204ENST00000594828 HHLA3Q9XRX5 114 aa16.19■□□□□ 0.18
LSM4-204ENST00000594828 ICOSQ9Y6W8 199 aa16.19■□□□□ 0.18
LSM4-204ENST00000594828 TRGV11A0A075B6L2 103 aa16.18■□□□□ 0.18
LSM4-204ENST00000594828 A0A1W2PPQ1 181 aa16.18■□□□□ 0.18
LSM4-204ENST00000594828 ARL14EPLP0DKL9 152 aa16.18■□□□□ 0.18
LSM4-204ENST00000594828 FHL2Q14192 279 aa16.18■□□□□ 0.18
LSM4-204ENST00000594828 SPXQ9BT56 116 aa16.18■□□□□ 0.18
LSM4-204ENST00000594828 PSMG3Q9BT73 122 aaPredicted RBP16.18■□□□□ 0.18
LSM4-204ENST00000594828 NAGKQ9UJ70 344 aa16.18■□□□□ 0.18
LSM4-204ENST00000594828 DYNC1H1Q14204 4646 aaKnown RBP16.18■□□□□ 0.18
LSM4-204ENST00000594828 ATP6V0CP27449 155 aa16.17■□□□□ 0.18
LSM4-204ENST00000594828 CRYBA4P53673 196 aa16.17■□□□□ 0.18
LSM4-204ENST00000594828 C8orf49Q96NF6 230 aa16.17■□□□□ 0.18
LSM4-204ENST00000594828 MUC4Q99102 2169 aa16.17■□□□□ 0.18
LSM4-204ENST00000594828 DNAH11Q96DT5 4516 aa16.16■□□□□ 0.18
LSM4-204ENST00000594828 TRAV8-1A0A0A6YYK1 113 aa16.16■□□□□ 0.18
LSM4-204ENST00000594828 STAG3L2P0CL84 134 aa16.16■□□□□ 0.18
LSM4-204ENST00000594828 STAG3L3P0CL85 134 aa16.16■□□□□ 0.18
LSM4-204ENST00000594828 GNG5P63218 68 aa16.16■□□□□ 0.18
LSM4-204ENST00000594828 TDRG1Q3Y452 100 aa16.16■□□□□ 0.18
LSM4-204ENST00000594828 Q5BKY6 102 aa16.16■□□□□ 0.18
LSM4-204ENST00000594828 RASL10AQ92737 203 aa16.16■□□□□ 0.18
LSM4-204ENST00000594828 RAB24Q969Q5 203 aa16.16■□□□□ 0.18
LSM4-204ENST00000594828 TREM1Q9NP99 234 aa16.16■□□□□ 0.18
LSM4-204ENST00000594828 TRAV21A0A0B4J279 112 aa16.15■□□□□ 0.18
LSM4-204ENST00000594828 TRGV4A0A0C4DH28 118 aa16.15■□□□□ 0.18
LSM4-204ENST00000594828 MBP02144 154 aa16.15■□□□□ 0.18
LSM4-204ENST00000594828 SERF2P84101 59 aa16.15■□□□□ 0.18
LSM4-204ENST00000594828 TVP23CQ96ET8 276 aa16.15■□□□□ 0.18
LSM4-204ENST00000594828 GNRH2O43555 120 aa16.14■□□□□ 0.17
LSM4-204ENST00000594828 GIPP09681 153 aaPredicted RBP16.14■□□□□ 0.17
LSM4-204ENST00000594828 MRPL23Q16540 153 aaKnown RBP16.14■□□□□ 0.17
LSM4-204ENST00000594828 ASB13Q8WXK3 278 aa16.14■□□□□ 0.17
LSM4-204ENST00000594828 F6UZH7 168 aa16.13■□□□□ 0.17
LSM4-204ENST00000594828 SFTA3P0C7M3 94 aa16.13■□□□□ 0.17
LSM4-204ENST00000594828 GCHFRP30047 84 aa16.13■□□□□ 0.17
LSM4-204ENST00000594828 IQCF2Q8IXL9 164 aa16.13■□□□□ 0.17
LSM4-204ENST00000594828 INO80EQ8NBZ0 244 aaPredicted RBP16.13■□□□□ 0.17
LSM4-204ENST00000594828 ZNF479Q96JC4 524 aa16.13■□□□□ 0.17
LSM4-204ENST00000594828 SGK494Q96LW2 274 aa16.13■□□□□ 0.17
LSM4-204ENST00000594828 SERTM2A0A1B0GWG4 89 aa16.12■□□□□ 0.17
LSM4-204ENST00000594828 C16orf90A8MZG2 172 aa16.12■□□□□ 0.17
LSM4-204ENST00000594828 SIVA1O15304 175 aa16.12■□□□□ 0.17
LSM4-204ENST00000594828 BTF3P20290 206 aaKnown RBP16.12■□□□□ 0.17
LSM4-204ENST00000594828 C5orf17Q8NAS9 161 aa16.12■□□□□ 0.17
LSM4-204ENST00000594828 SUN5Q8TC36 379 aa16.12■□□□□ 0.17
LSM4-204ENST00000594828 TNFSF18Q9UNG2 199 aa16.12■□□□□ 0.17
LSM4-204ENST00000594828 IGHV3-16A0A0C4DH30 117 aa16.11■□□□□ 0.17
LSM4-204ENST00000594828 TCRAP04437 139 aa16.11■□□□□ 0.17
LSM4-204ENST00000594828 LYPD5Q6UWN5 251 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms