RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 EBLN2Q6P2I7 272 aa15.47■□□□□ 0.07
PNKP-203ENST00000593946 ZFAND2AQ8N6M9 145 aa15.47■□□□□ 0.07
PNKP-203ENST00000593946 MAP6D1Q9H9H5 199 aa15.47■□□□□ 0.07
PNKP-203ENST00000593946 FAM3BP58499 235 aaPredicted RBP15.46■□□□□ 0.07
PNKP-203ENST00000593946 PYGO2Q9BRQ0 406 aa15.46■□□□□ 0.07
PNKP-203ENST00000593946 SMIM27A0A1W2PRY6 76 aa15.46■□□□□ 0.06
PNKP-203ENST00000593946 CRISP2P16562 243 aa15.46■□□□□ 0.06
PNKP-203ENST00000593946 SPATA3Q8NHX4 192 aa15.46■□□□□ 0.06
PNKP-203ENST00000593946 NOTCH3Q9UM47 2321 aa15.45■□□□□ 0.06
PNKP-203ENST00000593946 A0A1W2PPQ1 181 aa15.45■□□□□ 0.06
PNKP-203ENST00000593946 PRR9Q5T870 116 aa15.45■□□□□ 0.06
PNKP-203ENST00000593946 TSKUQ8WUA8 353 aa15.45■□□□□ 0.06
PNKP-203ENST00000593946 ODF3Q96PU9 254 aa15.45■□□□□ 0.06
PNKP-203ENST00000593946 COL6A5A8TX70 2615 aa15.44■□□□□ 0.06
PNKP-203ENST00000593946 FABP5P3A8MUU1 101 aa15.44■□□□□ 0.06
PNKP-203ENST00000593946 DUSP14O95147 198 aaKnown RBP15.44■□□□□ 0.06
PNKP-203ENST00000593946 ODF3L2Q3SX64 289 aa15.44■□□□□ 0.06
PNKP-203ENST00000593946 APRG1Q8IVJ8 170 aa15.44■□□□□ 0.06
PNKP-203ENST00000593946 OR2D3Q8NGH3 330 aa15.44■□□□□ 0.06
PNKP-203ENST00000593946 TMEM158Q8WZ71 300 aa15.44■□□□□ 0.06
PNKP-203ENST00000593946 TRAV9-1A0A075B6T8 112 aa15.43■□□□□ 0.06
PNKP-203ENST00000593946 A8MWL6 223 aa15.43■□□□□ 0.06
PNKP-203ENST00000593946 RAB5AP20339 215 aa15.43■□□□□ 0.06
PNKP-203ENST00000593946 INSL3P51460 131 aa15.43■□□□□ 0.06
PNKP-203ENST00000593946 C3orf56Q8N813 242 aa15.43■□□□□ 0.06
PNKP-203ENST00000593946 HLA-DRB4P13762 266 aa15.43■□□□□ 0.06
PNKP-203ENST00000593946 RPL19P84098 196 aaKnown RBP15.43■□□□□ 0.06
PNKP-203ENST00000593946 FAM210BQ96KR6 192 aa15.43■□□□□ 0.06
PNKP-203ENST00000593946 HLA-DRB4X5D2U9 266 aa15.43■□□□□ 0.06
PNKP-203ENST00000593946 KNCNA6PVL3 124 aa15.42■□□□□ 0.06
PNKP-203ENST00000593946 A8MTW9 85 aa15.42■□□□□ 0.06
PNKP-203ENST00000593946 TCL1AP56279 114 aa15.42■□□□□ 0.06
PNKP-203ENST00000593946 BEAN1Q3B7T3 259 aa15.42■□□□□ 0.06
PNKP-203ENST00000593946 KLLNB2CW77 178 aa15.41■□□□□ 0.06
PNKP-203ENST00000593946 ZNF124Q15973 351 aa15.41■□□□□ 0.06
PNKP-203ENST00000593946 ACTL10Q5JWF8 245 aa15.41■□□□□ 0.06
PNKP-203ENST00000593946 C9orf66Q5T8R8 295 aa15.41■□□□□ 0.06
PNKP-203ENST00000593946 SHISA2Q6UWI4 295 aa15.41■□□□□ 0.06
PNKP-203ENST00000593946 NEU1Q99519 415 aa15.41■□□□□ 0.06
PNKP-203ENST00000593946 GFRA4Q9GZZ7 299 aa15.41■□□□□ 0.06
PNKP-203ENST00000593946 FAM231BA6NCW3 169 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 H3BMM0 161 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 GPX1P07203 203 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 AMTNQ6UX39 209 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 C12orf54Q6X4T0 127 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 WFDC9Q8NEX5 89 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 BTF3L4Q96K17 158 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 TRRAPQ9Y4A5 3859 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 TMEM189A5PLL7 270 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 J3KRW8 73 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 IGKV3-20P01619 116 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 KIR3DS1Q14943 382 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 LINC01559Q495D7 138 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 GTSF1Q8WW33 167 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 FAM110AQ9BQ89 295 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 NAT8BQ9UHF3 227 aa15.4■□□□□ 0.06
PNKP-203ENST00000593946 HIGD1CA8MV81 97 aa15.39■□□□□ 0.05
PNKP-203ENST00000593946 OR11H12B2RN74 326 aa15.39■□□□□ 0.05
PNKP-203ENST00000593946 TYMSP04818 313 aa15.39■□□□□ 0.05
PNKP-203ENST00000593946 GZMBP10144 247 aa15.39■□□□□ 0.05
PNKP-203ENST00000593946 LEPP41159 167 aa15.39■□□□□ 0.05
PNKP-203ENST00000593946 CMC4P56277 68 aaPredicted RBP15.39■□□□□ 0.05
PNKP-203ENST00000593946 Q6AWC8 147 aa15.39■□□□□ 0.05
PNKP-203ENST00000593946 NUP35Q8NFH5 326 aa15.39■□□□□ 0.05
PNKP-203ENST00000593946 Q6ZQT7 251 aa15.38■□□□□ 0.05
PNKP-203ENST00000593946 ZNF575Q86XF7 245 aa15.38■□□□□ 0.05
PNKP-203ENST00000593946 C11orf21Q9P2W6 132 aa15.38■□□□□ 0.05
PNKP-203ENST00000593946 ORM1P02763 201 aa15.37■□□□□ 0.05
PNKP-203ENST00000593946 RNASE4P34096 147 aaKnown RBP15.37■□□□□ 0.05
PNKP-203ENST00000593946 MCRIP2Q9BUT9 160 aaKnown RBP15.37■□□□□ 0.05
PNKP-203ENST00000593946 TRAV21A0A0B4J279 112 aa15.37■□□□□ 0.05
PNKP-203ENST00000593946 XKRY2A2RUG3 117 aa15.37■□□□□ 0.05
PNKP-203ENST00000593946 TSPOP30536 169 aa15.37■□□□□ 0.05
PNKP-203ENST00000593946 FOXA3P55318 350 aaPredicted RBP15.37■□□□□ 0.05
PNKP-203ENST00000593946 RPS20P60866 119 aaKnown RBP15.37■□□□□ 0.05
PNKP-203ENST00000593946 TMSB15BA0A087X1C1 80 aa15.36■□□□□ 0.05
PNKP-203ENST00000593946 M0R2Z0 102 aa15.36■□□□□ 0.05
PNKP-203ENST00000593946 CD7P09564 240 aa15.36■□□□□ 0.05
PNKP-203ENST00000593946 CDKN1BP46527 198 aa15.36■□□□□ 0.05
PNKP-203ENST00000593946 RPS10P46783 165 aaKnown RBP15.36■□□□□ 0.05
PNKP-203ENST00000593946 CLUHP3Q96NS8 147 aa15.36■□□□□ 0.05
PNKP-203ENST00000593946 SRD5A3Q9H8P0 318 aa15.36■□□□□ 0.05
PNKP-203ENST00000593946 C19orf73Q9NVV2 129 aa15.36■□□□□ 0.05
PNKP-203ENST00000593946 IGKV3D-20A0A0C4DH25 116 aa15.35■□□□□ 0.05
PNKP-203ENST00000593946 RBMY1BA6NDE4 496 aaKnown RBP15.35■□□□□ 0.05
PNKP-203ENST00000593946 RBMY1EA6NEQ0 496 aaKnown RBP15.35■□□□□ 0.05
PNKP-203ENST00000593946 RBMY1DP0C7P1 496 aaKnown RBP15.35■□□□□ 0.05
PNKP-203ENST00000593946 SPINK13Q1W4C9 94 aa15.35■□□□□ 0.05
PNKP-203ENST00000593946 C7orf71A4D174 169 aa15.34■□□□□ 0.05
PNKP-203ENST00000593946 SPINK4O60575 86 aa15.34■□□□□ 0.05
PNKP-203ENST00000593946 GFI1BQ5VTD9 330 aa15.34■□□□□ 0.05
PNKP-203ENST00000593946 WIPF1O43516 503 aa15.33■□□□□ 0.04
PNKP-203ENST00000593946 PGLYRP4Q96LB8 373 aa15.33■□□□□ 0.04
PNKP-203ENST00000593946 TRAV12-2A0A075B6T6 113 aa15.32■□□□□ 0.04
PNKP-203ENST00000593946 ZNF324O75467 553 aaPredicted RBP15.32■□□□□ 0.04
PNKP-203ENST00000593946 MRPL54Q6P161 138 aaKnown RBP15.32■□□□□ 0.04
PNKP-203ENST00000593946 FRMD6-AS1P0C7T7 363 aa15.31■□□□□ 0.04
PNKP-203ENST00000593946 IGLC6P0CF74 106 aa15.31■□□□□ 0.04
PNKP-203ENST00000593946 ATP5L2Q7Z4Y8 100 aa15.31■□□□□ 0.04
PNKP-203ENST00000593946 TRPT1Q86TN4 253 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms