RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 UBE2D4Q9Y2X8 147 aa1.61□□□□□ -2.15
VRK3-204ENST00000593912 RRP15Q9Y3B9 282 aaKnown RBP1.61□□□□□ -2.15
VRK3-204ENST00000593912 AK6Q9Y3D8 172 aaKnown RBP1.61□□□□□ -2.15
VRK3-204ENST00000593912 DSTQ03001 7570 aaKnown RBP1.6□□□□□ -2.15
VRK3-204ENST00000593912 TRGV11A0A075B6L2 103 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 IGKV2-40A0A087WW87 121 aaPredicted RBP1.6□□□□□ -2.15
VRK3-204ENST00000593912 FAM168BA1KXE4 195 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 CTDSPLO15194 276 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 IGKV2D-40P01614 121 aaPredicted RBP1.6□□□□□ -2.15
VRK3-204ENST00000593912 BCL2P10415 239 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 MGST1P10620 155 aaKnown RBP1.6□□□□□ -2.15
VRK3-204ENST00000593912 CRISP2P16562 243 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 AKR1C2P52895 323 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 RAB2AP61019 212 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 HERV-K104P61576 105 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 RPS25P62851 125 aaKnown RBP1.6□□□□□ -2.15
VRK3-204ENST00000593912 RBX1P62877 108 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 REG3AQ06141 175 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 GAGE6Q13070 117 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 SURF2Q15527 256 aaPredicted RBP1.6□□□□□ -2.15
VRK3-204ENST00000593912 KRTAP19-4Q3LI73 84 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 NMSQ5H8A3 153 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 LCN15Q6UWW0 184 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 TMPRSS11AQ6ZMR5 421 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 DEFB107AQ8IZN7 70 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 DAND5Q8N907 189 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 BEST4Q8NFU0 473 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 OR13C8Q8NGS7 320 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 OR2G3Q8NGZ4 309 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 KCNS1Q96KK3 526 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 CARD19Q96LW7 228 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 TRGV9Q99603 122 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 CHCHD5Q9BSY4 110 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 SRRQ9GZT4 340 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 PRR13Q9NZ81 148 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 RAB22AQ9UL26 194 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 SLC45A2Q9UMX9 530 aa1.6□□□□□ -2.15
VRK3-204ENST00000593912 GAGE12HA6NDE8 117 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 PGPEP1LA6NFU8 196 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 CEBPZOSA8MTT3 80 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 F5H697 171 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 GABARAPH6UMI1 98 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 ZNF861PO60384 105 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 FKBP6O75344 327 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 GABARAPO95166 117 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 TNFRSF6BO95407 300 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 PTTG1O95997 202 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 TYMSP04818 313 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 FABP1P07148 127 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 OR5G3P0C626 314 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 ANXA7P20073 488 aaKnown RBP1.59□□□□□ -2.15
VRK3-204ENST00000593912 MAPK3P27361 379 aaPredicted RBP1.59□□□□□ -2.15
VRK3-204ENST00000593912 GNG2P59768 71 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 SPCS3P61009 180 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 RPP30P78346 268 aaKnown RBP1.59□□□□□ -2.15
VRK3-204ENST00000593912 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 ZNF485Q8NCK3 441 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 CCDC197Q8NCU1 140 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 OR10G7Q8NGN6 311 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 PHYHIPQ92561 330 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 UFD1Q92890 307 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 CCDC124Q96CT7 223 aaKnown RBP1.59□□□□□ -2.15
VRK3-204ENST00000593912 SPRR2FQ96RM1 72 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 MGLLQ99685 303 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 GABARAPL3Q9BY60 117 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 AUNIPQ9H7T9 357 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 JPT2Q9H910 190 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 SLC39A9Q9NUM3 307 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 HIGD1AQ9Y241 93 aa1.59□□□□□ -2.15
VRK3-204ENST00000593912 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.16
VRK3-204ENST00000593912 GVQW2A0A096LPI5 108 aaPredicted RBP1.58□□□□□ -2.16
VRK3-204ENST00000593912 TRBV6-8A0A0A6YYG3 113 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 LOC107984640A0A0U1RRK4 108 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 DUXBA0A1W2PPF3 345 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 G3V2T6 193 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 H3BQ15 152 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 CXCL2P19875 107 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 CAV2P51636 162 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 RAP2BP61225 183 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 UBE2BP63146 152 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 RPL18AQ02543 176 aaKnown RBP1.58□□□□□ -2.16
VRK3-204ENST00000593912 ZNF506Q5JVG8 444 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 LINC00242Q5T6M2 205 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 LCE1AQ5T7P2 110 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 GGNBP1Q5YKI7 109 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 FAM159AQ6UWV7 190 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 PATE2Q6UY27 113 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 FAM19A5Q7Z5A7 132 aaPredicted RBP1.58□□□□□ -2.16
VRK3-204ENST00000593912 C3orf22Q8N5N4 141 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 NANOGP1Q8N7R0 232 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 C20orf203Q8NBC4 194 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 NEXN-AS1Q8NBZ9 246 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 RNASE11Q8TAA1 199 aaKnown RBP1.58□□□□□ -2.16
VRK3-204ENST00000593912 ATG5Q9H1Y0 275 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 PARLQ9H300 379 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 NPVFQ9HCQ7 196 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 PXMP4Q9Y6I8 212 aa1.58□□□□□ -2.16
VRK3-204ENST00000593912 IGLV4-60A0A075B6I1 120 aa1.57□□□□□ -2.16
VRK3-204ENST00000593912 IGKV2D-26A0A0A0MRZ7 120 aa1.57□□□□□ -2.16
VRK3-204ENST00000593912 IGKV3OR2-268A0A0C4DH90 116 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms