RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 KLK15Q9H2R5 256 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 MS4A6AQ9H2W1 248 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 MAP1LC3AQ9H492 121 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 LENEPQ9Y5L5 61 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 TCF21O43680 179 aa12.64□□□□□ -0.39
PRKCSH-217ENST00000592741 SLC25A16P16260 332 aa12.64□□□□□ -0.39
PRKCSH-217ENST00000592741 PRSS57Q6UWY2 283 aa12.64□□□□□ -0.39
PRKCSH-217ENST00000592741 OR8A1Q8NGG7 326 aa12.64□□□□□ -0.39
PRKCSH-217ENST00000592741 SVEP1Q4LDE5 3571 aa12.63□□□□□ -0.39
PRKCSH-217ENST00000592741 AVPP01185 164 aa12.63□□□□□ -0.39
PRKCSH-217ENST00000592741 IGLV1-40P01703 118 aa12.63□□□□□ -0.39
PRKCSH-217ENST00000592741 FOXE3Q13461 319 aa12.63□□□□□ -0.39
PRKCSH-217ENST00000592741 Q6ZS46 218 aa12.63□□□□□ -0.39
PRKCSH-217ENST00000592741 STPG4Q8N801 248 aa12.63□□□□□ -0.39
PRKCSH-217ENST00000592741 PMCHL2Q9BQD1 86 aa12.63□□□□□ -0.39
PRKCSH-217ENST00000592741 OVOL1O14753 267 aa12.62□□□□□ -0.39
PRKCSH-217ENST00000592741 TFPI2P48307 235 aa12.62□□□□□ -0.39
PRKCSH-217ENST00000592741 HINT1P49773 126 aaPredicted RBP12.62□□□□□ -0.39
PRKCSH-217ENST00000592741 SLC25A34Q6PIV7 304 aa12.62□□□□□ -0.39
PRKCSH-217ENST00000592741 SMIM15Q7Z3B0 74 aa12.62□□□□□ -0.39
PRKCSH-217ENST00000592741 GPHB5Q86YW7 130 aa12.62□□□□□ -0.39
PRKCSH-217ENST00000592741 OR10J6PQ8NGY7 276 aa12.62□□□□□ -0.39
PRKCSH-217ENST00000592741 LINC00477Q96M19 166 aa12.62□□□□□ -0.39
PRKCSH-217ENST00000592741 SOCS3O14543 225 aa12.62□□□□□ -0.39
PRKCSH-217ENST00000592741 NRGNQ92686 78 aa12.62□□□□□ -0.39
PRKCSH-217ENST00000592741 SCRT2Q9NQ03 307 aa12.62□□□□□ -0.39
PRKCSH-217ENST00000592741 CACNA1AO00555 2505 aa12.61□□□□□ -0.39
PRKCSH-217ENST00000592741 IGHV7-4-1A0A0J9YVY3 117 aa12.61□□□□□ -0.39
PRKCSH-217ENST00000592741 TNFRSF6BO95407 300 aa12.61□□□□□ -0.39
PRKCSH-217ENST00000592741 CACNG7P62955 275 aa12.61□□□□□ -0.39
PRKCSH-217ENST00000592741 CFHR3Q02985 330 aa12.61□□□□□ -0.39
PRKCSH-217ENST00000592741 LCNL1Q6ZST4 164 aa12.61□□□□□ -0.39
PRKCSH-217ENST00000592741 LINC01356Q8N9X3 169 aa12.61□□□□□ -0.39
PRKCSH-217ENST00000592741 TMEM208Q9BTX3 173 aa12.61□□□□□ -0.39
PRKCSH-217ENST00000592741 RPL11P62913 178 aaKnown RBP12.6□□□□□ -0.39
PRKCSH-217ENST00000592741 LGALS9BQ3B8N2 356 aa12.6□□□□□ -0.39
PRKCSH-217ENST00000592741 LGALS9CQ6DKI2 356 aa12.6□□□□□ -0.39
PRKCSH-217ENST00000592741 NXT2Q9NPJ8 142 aaKnown RBP12.6□□□□□ -0.39
PRKCSH-217ENST00000592741 ZNF580Q9UK33 172 aa12.6□□□□□ -0.39
PRKCSH-217ENST00000592741 GOLT1BQ9Y3E0 138 aa12.6□□□□□ -0.39
PRKCSH-217ENST00000592741 LINC01546A6NGU7 62 aa12.59□□□□□ -0.39
PRKCSH-217ENST00000592741 DLEU1O43261 78 aa12.59□□□□□ -0.39
PRKCSH-217ENST00000592741 SNAI2O43623 268 aa12.59□□□□□ -0.39
PRKCSH-217ENST00000592741 FXYD7P58549 80 aa12.59□□□□□ -0.39
PRKCSH-217ENST00000592741 PRR9Q5T870 116 aa12.59□□□□□ -0.39
PRKCSH-217ENST00000592741 GAGE1Q13065 139 aa12.59□□□□□ -0.39
PRKCSH-217ENST00000592741 RHPN1-AS1Q9BWJ2 59 aa12.59□□□□□ -0.39
PRKCSH-217ENST00000592741 DAZ1Q9NQZ3 744 aaKnown RBP12.59□□□□□ -0.39
PRKCSH-217ENST00000592741 PIEZO1Q92508 2521 aa12.59□□□□□ -0.39
PRKCSH-217ENST00000592741 IGHV4-4A0A075B6R2 117 aa12.58□□□□□ -0.4
PRKCSH-217ENST00000592741 SPANXN1Q5VSR9 72 aa12.58□□□□□ -0.4
PRKCSH-217ENST00000592741 IFI27L1Q96BM0 104 aa12.58□□□□□ -0.4
PRKCSH-217ENST00000592741 TRAV21A0A0B4J279 112 aa12.58□□□□□ -0.4
PRKCSH-217ENST00000592741 GAS8-AS1O95177 125 aa12.58□□□□□ -0.4
PRKCSH-217ENST00000592741 EVI2AP22794 236 aa12.58□□□□□ -0.4
PRKCSH-217ENST00000592741 TM4SF20Q53R12 229 aa12.58□□□□□ -0.4
PRKCSH-217ENST00000592741 Q6ZQT7 251 aa12.58□□□□□ -0.4
PRKCSH-217ENST00000592741 ZFAND2AQ8N6M9 145 aa12.58□□□□□ -0.4
PRKCSH-217ENST00000592741 PEF1Q9UBV8 284 aaKnown RBP12.58□□□□□ -0.4
PRKCSH-217ENST00000592741 TP73-AS1Q9UF72 201 aa12.58□□□□□ -0.4
PRKCSH-217ENST00000592741 UFC1Q9Y3C8 167 aa12.58□□□□□ -0.4
PRKCSH-217ENST00000592741 H3BVH4 76 aa12.57□□□□□ -0.4
PRKCSH-217ENST00000592741 J3QLI3 93 aa12.57□□□□□ -0.4
PRKCSH-217ENST00000592741 DEFB112Q30KQ8 113 aa12.57□□□□□ -0.4
PRKCSH-217ENST00000592741 DOPEY1Q5JWR5 2465 aa12.57□□□□□ -0.4
PRKCSH-217ENST00000592741 J3KRW8 73 aa12.56□□□□□ -0.4
PRKCSH-217ENST00000592741 IGHV4-59P01825 116 aa12.56□□□□□ -0.4
PRKCSH-217ENST00000592741 COX6B1P14854 86 aa12.56□□□□□ -0.4
PRKCSH-217ENST00000592741 OR2K2Q8NGT1 345 aa12.56□□□□□ -0.4
PRKCSH-217ENST00000592741 DPF1Q92782 380 aa12.56□□□□□ -0.4
PRKCSH-217ENST00000592741 K7EMT4 169 aa12.56□□□□□ -0.4
PRKCSH-217ENST00000592741 GATA1P15976 413 aaPredicted RBP12.56□□□□□ -0.4
PRKCSH-217ENST00000592741 TMEM95Q3KNT9 176 aa12.56□□□□□ -0.4
PRKCSH-217ENST00000592741 SMPXQ9UHP9 88 aa12.56□□□□□ -0.4
PRKCSH-217ENST00000592741 VPS13CQ709C8 3753 aa12.55□□□□□ -0.4
PRKCSH-217ENST00000592741 COX8AP10176 69 aa12.55□□□□□ -0.4
PRKCSH-217ENST00000592741 FCER1GP30273 86 aa12.55□□□□□ -0.4
PRKCSH-217ENST00000592741 LEPP41159 167 aa12.55□□□□□ -0.4
PRKCSH-217ENST00000592741 Q8N8P6 123 aa12.55□□□□□ -0.4
PRKCSH-217ENST00000592741 CFAP46Q8IYW2 2715 aa12.55□□□□□ -0.4
PRKCSH-217ENST00000592741 ZFHX3Q15911 3703 aa12.55□□□□□ -0.4
PRKCSH-217ENST00000592741 SPTAN1Q13813 2472 aaKnown RBP12.55□□□□□ -0.4
PRKCSH-217ENST00000592741 IGKV3-7A0A075B6H7 116 aa12.55□□□□□ -0.4
PRKCSH-217ENST00000592741 FAM19A4Q96LR4 140 aa12.55□□□□□ -0.4
PRKCSH-217ENST00000592741 A0A096LNT2 108 aa12.54□□□□□ -0.4
PRKCSH-217ENST00000592741 PSMB8P28062 276 aa12.54□□□□□ -0.4
PRKCSH-217ENST00000592741 DEFB1P60022 68 aa12.54□□□□□ -0.4
PRKCSH-217ENST00000592741 OR1N2Q8NGR9 330 aa12.54□□□□□ -0.4
PRKCSH-217ENST00000592741 TRBV7-9A0A0J9YWB2 115 aa12.53□□□□□ -0.4
PRKCSH-217ENST00000592741 PRB1P04280 392 aa12.53□□□□□ -0.4
PRKCSH-217ENST00000592741 ASIPP42127 132 aa12.53□□□□□ -0.4
PRKCSH-217ENST00000592741 COL12A1Q99715 3063 aa12.53□□□□□ -0.4
PRKCSH-217ENST00000592741 TGFAP01135 160 aa12.53□□□□□ -0.4
PRKCSH-217ENST00000592741 S100A4P26447 101 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-217ENST00000592741 ID1P41134 155 aa12.53□□□□□ -0.4
PRKCSH-217ENST00000592741 MPV17L2Q567V2 206 aa12.53□□□□□ -0.4
PRKCSH-217ENST00000592741 SAMD13Q5VXD3 122 aa12.53□□□□□ -0.4
PRKCSH-217ENST00000592741 NRACQ8N912 160 aa12.53□□□□□ -0.4
PRKCSH-217ENST00000592741 TMEM89A2RUT3 159 aa12.52□□□□□ -0.4
PRKCSH-217ENST00000592741 PRSS47A8MTI9 375 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms